| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is purC2 [H]
Identifier: 146337190
GI number: 146337190
Start: 20610
End: 21524
Strand: Direct
Name: purC2 [H]
Synonym: BRADO0015
Alternate gene names: 146337190
Gene position: 20610-21524 (Clockwise)
Preceding gene: 146337189
Following gene: 146337192
Centisome position: 0.28
GC content: 64.92
Gene sequence:
>915_bases ATGACCACGCTTCTCGCCAGCAATCTGCCGCTCCCGATAATCGGCCGCGGCAAGGTCCGCGACATCTATGCCGTCGGCGA CGACCGCGTGCTGCTGCTGACCACCGACCGCATCTCCGCCTTCGACGTCGTGATGAACGAGACCATCCCGATGAAGGGCG CGGTGCTGACGCAGATCTCGGCCTACTGGTTCAACGCGCTCGAAGGCGTCGTGCATCACCATATGATCTCGGCCGACACG GATGAGATCATCACAGCCGTCCCCGAGTTGAAGCCGCATCGCGACGAGATCCTCGGCCGTGCGATGCTGTGCAAGCGGAC CACGGTGTTTCCGATCGAATGCGTGATCCGCGGCTATCTCTCGGGCTCGGCCTGGAAGGAATATGCGGCCCACGGCACGC TCGCCGGCGAACAGTTGCCTGCAGGTCTTGTCGAGAGCCAGAAGCTCGAGCCCGCGATCTTCAGCCCGGCGACCAAGGCC GAGACCGGCCATGACGAGAACATCACGATCGCCCGGATGCGCGAGGTGGTCGGCGACGAGACGGCATATACGCTCGAGAG CATGACGCGCGCGGTCTATACACTGGGTGAAAAGCTCGCGCGCGAGCAGGGCATCATCATCGCCGACACCAAATTCGAGT TCGGCCGCGACAAGGACGGCCACATCATCCTGATCGACGAGGTGATGACGCCGGATTCGTCGCGCTTCTGGGCGGTCGAC GCCTACAAGCCGGGCCAGCCGCAGCCGAGCTTCGACAAGCAGCCGCTGCGCGACTATCTCGATGCCGAACGCCGTGCCGG CCGCTGGAACGGCGACGCCCCGCCGCCGCCGCTGCCGCAGAGCGTAGTGGACGCGACAAGCCAGCGCTATCTCGAGGCGT TCCGGCGCGTGACGGAACGGGAGCTGAAGGTCTGA
Upstream 100 bases:
>100_bases GAAAACCGGCCGCTTCGCCGCAGTACCGCACGAGCACGAGTTCATTCCGCTGCCGGAATAGGCTATGGGGAGCGACGCTC CCTTTCGAAGGCTCGACACG
Downstream 100 bases:
>100_bases GGATTCTAAGCTCACGCGTTGACGCCTGGATCGGGACTTTTTGTAGTAGCGCGCATTGTCGACAGTGTGCATCGTGGACC CCCAACCCCGATCCTCCCCG
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase 2 [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTTLLASNLPLPIIGRGKVRDIYAVGDDRVLLLTTDRISAFDVVMNETIPMKGAVLTQISAYWFNALEGVVHHHMISADT DEIITAVPELKPHRDEILGRAMLCKRTTVFPIECVIRGYLSGSAWKEYAAHGTLAGEQLPAGLVESQKLEPAIFSPATKA ETGHDENITIARMREVVGDETAYTLESMTRAVYTLGEKLAREQGIIIADTKFEFGRDKDGHIILIDEVMTPDSSRFWAVD AYKPGQPQPSFDKQPLRDYLDAERRAGRWNGDAPPPPLPQSVVDATSQRYLEAFRRVTERELKV
Sequences:
>Translated_304_residues MTTLLASNLPLPIIGRGKVRDIYAVGDDRVLLLTTDRISAFDVVMNETIPMKGAVLTQISAYWFNALEGVVHHHMISADT DEIITAVPELKPHRDEILGRAMLCKRTTVFPIECVIRGYLSGSAWKEYAAHGTLAGEQLPAGLVESQKLEPAIFSPATKA ETGHDENITIARMREVVGDETAYTLESMTRAVYTLGEKLAREQGIIIADTKFEFGRDKDGHIILIDEVMTPDSSRFWAVD AYKPGQPQPSFDKQPLRDYLDAERRAGRWNGDAPPPPLPQSVVDATSQRYLEAFRRVTERELKV >Mature_303_residues TTLLASNLPLPIIGRGKVRDIYAVGDDRVLLLTTDRISAFDVVMNETIPMKGAVLTQISAYWFNALEGVVHHHMISADTD EIITAVPELKPHRDEILGRAMLCKRTTVFPIECVIRGYLSGSAWKEYAAHGTLAGEQLPAGLVESQKLEPAIFSPATKAE TGHDENITIARMREVVGDETAYTLESMTRAVYTLGEKLAREQGIIIADTKFEFGRDKDGHIILIDEVMTPDSSRFWAVDA YKPGQPQPSFDKQPLRDYLDAERRAGRWNGDAPPPPLPQSVVDATSQRYLEAFRRVTERELKV
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=294, Percent_Identity=44.8979591836735, Blast_Score=250, Evalue=2e-67,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 33876; Mature: 33745
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS01057 SAICAR_SYNTHETASE_1 ; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLLASNLPLPIIGRGKVRDIYAVGDDRVLLLTTDRISAFDVVMNETIPMKGAVLTQIS CCCEECCCCCCCEECCCCCEEEEEECCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHH AYWFNALEGVVHHHMISADTDEIITAVPELKPHRDEILGRAMLCKRTTVFPIECVIRGYL HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH SGSAWKEYAAHGTLAGEQLPAGLVESQKLEPAIFSPATKAETGHDENITIARMREVVGDE CCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCC TAYTLESMTRAVYTLGEKLAREQGIIIADTKFEFGRDKDGHIILIDEVMTPDSSRFWAVD HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEE AYKPGQPQPSFDKQPLRDYLDAERRAGRWNGDAPPPPLPQSVVDATSQRYLEAFRRVTER CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ELKV HCCC >Mature Secondary Structure TTLLASNLPLPIIGRGKVRDIYAVGDDRVLLLTTDRISAFDVVMNETIPMKGAVLTQIS CCEECCCCCCCEECCCCCEEEEEECCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHH AYWFNALEGVVHHHMISADTDEIITAVPELKPHRDEILGRAMLCKRTTVFPIECVIRGYL HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH SGSAWKEYAAHGTLAGEQLPAGLVESQKLEPAIFSPATKAETGHDENITIARMREVVGDE CCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCC TAYTLESMTRAVYTLGEKLAREQGIIIADTKFEFGRDKDGHIILIDEVMTPDSSRFWAVD HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEE AYKPGQPQPSFDKQPLRDYLDAERRAGRWNGDAPPPPLPQSVVDATSQRYLEAFRRVTER CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ELKV HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]