Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146302686

Identifier: 146302686

GI number: 146302686

Start: 5993514

End: 5995493

Strand: Direct

Name: 146302686

Synonym: Fjoh_4959

Alternate gene names: NA

Gene position: 5993514-5995493 (Clockwise)

Preceding gene: 146302685

Following gene: 146302688

Centisome position: 98.3

GC content: 34.29

Gene sequence:

>1980_bases
ATGAAAAATGCAATTATTCTTTTTTGTTTATTATTTCTAAATCTTTCTTTTTCGCAGCAAAAAAAGAACTTTTCTGTTAG
TTCTCCTAATGGAAAAATCGAAGTTACAGTTGCTGTGAGTGATAAAATTTCATGGACGATTTGGCATCAAAAAGATTTGA
TTTTGGCACCTTCTGAAATGTCGATGACTTTAGATGAAAATACCGTTTTAGGAAAAAATCCGGTTGTACTAAATACAAAA
AAAGAAAGTGTAAATACTGAATTTGAAACACCTTTATACAAAAAGAAAACAGTTCAAAATAAATACAATCAGCTGGTTTT
AAATTTTAAAAATGATTTTAGTATTGAATTTCGCGTTTTTGATGATGGCGCTGCTTATCGCTTTATTACCAAAAAGAAAA
AGAATATTACTGTAAAATGGGAAAACGTTTCTTTAAATTTCGATCAGGATTACAATACTTTAATGCCGTATGTGCGTGAT
TTAAGAAACCCTAAAGATCAATTTATTTCTTCATTTGAATCGCATTACGAAAACAAAAAAATAAGCGGATTTTCTAAAGA
TACTCTGGCTTTTTCTCCTTTTTTAATTGATTATAAAAACCACAAAAAAGCCGTTTTTCTGGAAGCTGATTTAGAAGATT
ATCCAGGGCTTTTTGTAACCAATAATAAAAACAAAACAGGTTTTGAATCTCGTTTTTCTAAATATCCAACTCAAGAAACC
AACGGCGGATTCAACTACCTCAACAAGTTAATTACCGAAAGAGCTGATTATTTAGTTAAAACCAAAGGAACGAGGACTTT
TCCGTGGAGAGCGATTGTTATTTCTGAAAATGATACTGCTTTAGCCAATAATGATATGGTTCAGAAATTAGCCGAACCAT
CAAAAATAAAAGATATTTCGTGGATAAAACCCGGAAAGGTGGCTTGGGACTGGTGGAACGACTGGAATATTTACAACGTA
GATTTTAAAGCTGGAATCAATACGCAGACTTATAAATACTATATTGATTTTGCTTCTAAAAACAAAGTTGAATATGTGGT
TTTGGATGAAGGCTGGAGTGTTGAAACCGACATTATGAAACACAACCCAAATGTAGATTTGGAAGCTTTAATTGCTTACG
CGAAAGAACGAAATGTTGGTATTATTTTGTGGGCTTCGTGGATGGCTTTGCATGAAAATATTGACGGCGTTTTTGACAAT
TATGCTAAATTGGGTGTAAAAGGTTTCAAAGTTGATTTCATTGATCGTGACGATGCCAAAATGGTAAATTCGGTTTATGA
AATTGCTCAAAAAGCAGCCAATCACAAACTGATTATTGATTTTCACGGCATGTACAAGCCAACCGGAATTCAGCGAACGT
ATCCAAATATTTTAAATTTTGAAGGCGTAAAAGGTCTTGAAAATAATAAATGGACTCCAAATGATGATGTTCCATTATAC
GACACCACAATCCCGTTTATCAGAATGATGGCAGGTCCAATGGATTATACGCCGGGTGCAATGAGAAATGCGACAAAAAG
CGAGTTCAAACCTAGTCACTCCAACCCAATGAGCCAGGGAACAAGATGTCACCAGCTGGCACTTTACACGATTTTTGAAG
CTCCTTTGCAAATGATGGCCGACAGCCCGACTGCTTTTATGAAAGAGCAGGAAAGCACTGATTTTATTGCTAAAGTTCCA
ACGACTTTTGATGAAACTGCTGCTCTTGATGGAGAAGTTGGAAAATACATTTCAATTGCCAGAAGAAAAGGAAATACATG
GTATTTAGGCGCAATAACAAATTGGGATTCCAGAGACATTACTATTGATTTTTCTTTTCTTGAAAAAGGGAAAAAATTCC
AAGCAGAAATTTTCTCAGATGGTCTTAACGCAGACAAAGCAGCAACTGATTATAAAAAAGAAATCGTTACCGTTGATTCT
ACGACTAAACTAAAATATCGTTTAGCAAACGGCGGTGGATTAGCGATGATTATCAAATAA

Upstream 100 bases:

>100_bases
TAAATAACCGGATTGAAATCCGGTCCTAAAATATTAATCGAGCCTTAGGCTCTTTTCTAAACTGAACTTATATAACTTAT
ATGGTTTAAAAAACATCCAG

Downstream 100 bases:

>100_bases
AATCCATTTCTATAAACAAACCCGACAGGTTTTAAAAACCTGTCGGGTTATAATATCTAAACATGACGTCGACGCACAGA
GGCGCGTATCTACGATTATG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase; Glycoside Hydrolase Family; Alpha-Glucosidase Family Protein; Alpha-Glucosidase Protein; Glycoside Hydrolase Family Protein; Esterase; Alpha-Glucosidase-Like Protein; Glycosyl Hydrolase Family; Alpha-Glucosidase SusB; Secreted Protein

Number of amino acids: Translated: 659; Mature: 659

Protein sequence:

>659_residues
MKNAIILFCLLFLNLSFSQQKKNFSVSSPNGKIEVTVAVSDKISWTIWHQKDLILAPSEMSMTLDENTVLGKNPVVLNTK
KESVNTEFETPLYKKKTVQNKYNQLVLNFKNDFSIEFRVFDDGAAYRFITKKKKNITVKWENVSLNFDQDYNTLMPYVRD
LRNPKDQFISSFESHYENKKISGFSKDTLAFSPFLIDYKNHKKAVFLEADLEDYPGLFVTNNKNKTGFESRFSKYPTQET
NGGFNYLNKLITERADYLVKTKGTRTFPWRAIVISENDTALANNDMVQKLAEPSKIKDISWIKPGKVAWDWWNDWNIYNV
DFKAGINTQTYKYYIDFASKNKVEYVVLDEGWSVETDIMKHNPNVDLEALIAYAKERNVGIILWASWMALHENIDGVFDN
YAKLGVKGFKVDFIDRDDAKMVNSVYEIAQKAANHKLIIDFHGMYKPTGIQRTYPNILNFEGVKGLENNKWTPNDDVPLY
DTTIPFIRMMAGPMDYTPGAMRNATKSEFKPSHSNPMSQGTRCHQLALYTIFEAPLQMMADSPTAFMKEQESTDFIAKVP
TTFDETAALDGEVGKYISIARRKGNTWYLGAITNWDSRDITIDFSFLEKGKKFQAEIFSDGLNADKAATDYKKEIVTVDS
TTKLKYRLANGGGLAMIIK

Sequences:

>Translated_659_residues
MKNAIILFCLLFLNLSFSQQKKNFSVSSPNGKIEVTVAVSDKISWTIWHQKDLILAPSEMSMTLDENTVLGKNPVVLNTK
KESVNTEFETPLYKKKTVQNKYNQLVLNFKNDFSIEFRVFDDGAAYRFITKKKKNITVKWENVSLNFDQDYNTLMPYVRD
LRNPKDQFISSFESHYENKKISGFSKDTLAFSPFLIDYKNHKKAVFLEADLEDYPGLFVTNNKNKTGFESRFSKYPTQET
NGGFNYLNKLITERADYLVKTKGTRTFPWRAIVISENDTALANNDMVQKLAEPSKIKDISWIKPGKVAWDWWNDWNIYNV
DFKAGINTQTYKYYIDFASKNKVEYVVLDEGWSVETDIMKHNPNVDLEALIAYAKERNVGIILWASWMALHENIDGVFDN
YAKLGVKGFKVDFIDRDDAKMVNSVYEIAQKAANHKLIIDFHGMYKPTGIQRTYPNILNFEGVKGLENNKWTPNDDVPLY
DTTIPFIRMMAGPMDYTPGAMRNATKSEFKPSHSNPMSQGTRCHQLALYTIFEAPLQMMADSPTAFMKEQESTDFIAKVP
TTFDETAALDGEVGKYISIARRKGNTWYLGAITNWDSRDITIDFSFLEKGKKFQAEIFSDGLNADKAATDYKKEIVTVDS
TTKLKYRLANGGGLAMIIK
>Mature_659_residues
MKNAIILFCLLFLNLSFSQQKKNFSVSSPNGKIEVTVAVSDKISWTIWHQKDLILAPSEMSMTLDENTVLGKNPVVLNTK
KESVNTEFETPLYKKKTVQNKYNQLVLNFKNDFSIEFRVFDDGAAYRFITKKKKNITVKWENVSLNFDQDYNTLMPYVRD
LRNPKDQFISSFESHYENKKISGFSKDTLAFSPFLIDYKNHKKAVFLEADLEDYPGLFVTNNKNKTGFESRFSKYPTQET
NGGFNYLNKLITERADYLVKTKGTRTFPWRAIVISENDTALANNDMVQKLAEPSKIKDISWIKPGKVAWDWWNDWNIYNV
DFKAGINTQTYKYYIDFASKNKVEYVVLDEGWSVETDIMKHNPNVDLEALIAYAKERNVGIILWASWMALHENIDGVFDN
YAKLGVKGFKVDFIDRDDAKMVNSVYEIAQKAANHKLIIDFHGMYKPTGIQRTYPNILNFEGVKGLENNKWTPNDDVPLY
DTTIPFIRMMAGPMDYTPGAMRNATKSEFKPSHSNPMSQGTRCHQLALYTIFEAPLQMMADSPTAFMKEQESTDFIAKVP
TTFDETAALDGEVGKYISIARRKGNTWYLGAITNWDSRDITIDFSFLEKGKKFQAEIFSDGLNADKAATDYKKEIVTVDS
TTKLKYRLANGGGLAMIIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75552; Mature: 75552

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNAIILFCLLFLNLSFSQQKKNFSVSSPNGKIEVTVAVSDKISWTIWHQKDLILAPSEM
CCCHHHHHHHHHHCCCCCHHCCCCEEECCCCEEEEEEEEECCEEEEEEECCCEEECCCCC
SMTLDENTVLGKNPVVLNTKKESVNTEFETPLYKKKTVQNKYNQLVLNFKNDFSIEFRVF
EEEECCCEEECCCCEEEECCHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEE
DDGAAYRFITKKKKNITVKWENVSLNFDQDYNTLMPYVRDLRNPKDQFISSFESHYENKK
ECCCEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
ISGFSKDTLAFSPFLIDYKNHKKAVFLEADLEDYPGLFVTNNKNKTGFESRFSKYPTQET
CCCCCCCCEEECCEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHCCCCCC
NGGFNYLNKLITERADYLVKTKGTRTFPWRAIVISENDTALANNDMVQKLAEPSKIKDIS
CCCHHHHHHHHHHHHCEEEEECCCEECCEEEEEEECCCCEECCCHHHHHHCCCCCCCCCC
WIKPGKVAWDWWNDWNIYNVDFKAGINTQTYKYYIDFASKNKVEYVVLDEGWSVETDIMK
CCCCCCEEEEEECCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEHHHH
HNPNVDLEALIAYAKERNVGIILWASWMALHENIDGVFDNYAKLGVKGFKVDFIDRDDAK
CCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHHH
MVNSVYEIAQKAANHKLIIDFHGMYKPTGIQRTYPNILNFEGVKGLENNKWTPNDDVPLY
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
DTTIPFIRMMAGPMDYTPGAMRNATKSEFKPSHSNPMSQGTRCHQLALYTIFEAPLQMMA
ECHHHHHHHHCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
DSPTAFMKEQESTDFIAKVPTTFDETAALDGEVGKYISIARRKGNTWYLGAITNWDSRDI
CCCHHHHHCCCCCCEEEECCCCCCCHHCCCCCHHHHEEEEEECCCEEEEEEEECCCCCEE
TIDFSFLEKGKKFQAEIFSDGLNADKAATDYKKEIVTVDSTTKLKYRLANGGGLAMIIK
EEEEHHHHCCCCEEHHHHHCCCCCCHHHCCCCCEEEEECCCCEEEEEEECCCCEEEEEC
>Mature Secondary Structure
MKNAIILFCLLFLNLSFSQQKKNFSVSSPNGKIEVTVAVSDKISWTIWHQKDLILAPSEM
CCCHHHHHHHHHHCCCCCHHCCCCEEECCCCEEEEEEEEECCEEEEEEECCCEEECCCCC
SMTLDENTVLGKNPVVLNTKKESVNTEFETPLYKKKTVQNKYNQLVLNFKNDFSIEFRVF
EEEECCCEEECCCCEEEECCHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEE
DDGAAYRFITKKKKNITVKWENVSLNFDQDYNTLMPYVRDLRNPKDQFISSFESHYENKK
ECCCEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
ISGFSKDTLAFSPFLIDYKNHKKAVFLEADLEDYPGLFVTNNKNKTGFESRFSKYPTQET
CCCCCCCCEEECCEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHCCCCCC
NGGFNYLNKLITERADYLVKTKGTRTFPWRAIVISENDTALANNDMVQKLAEPSKIKDIS
CCCHHHHHHHHHHHHCEEEEECCCEECCEEEEEEECCCCEECCCHHHHHHCCCCCCCCCC
WIKPGKVAWDWWNDWNIYNVDFKAGINTQTYKYYIDFASKNKVEYVVLDEGWSVETDIMK
CCCCCCEEEEEECCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEHHHH
HNPNVDLEALIAYAKERNVGIILWASWMALHENIDGVFDNYAKLGVKGFKVDFIDRDDAK
CCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHHH
MVNSVYEIAQKAANHKLIIDFHGMYKPTGIQRTYPNILNFEGVKGLENNKWTPNDDVPLY
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
DTTIPFIRMMAGPMDYTPGAMRNATKSEFKPSHSNPMSQGTRCHQLALYTIFEAPLQMMA
ECHHHHHHHHCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
DSPTAFMKEQESTDFIAKVPTTFDETAALDGEVGKYISIARRKGNTWYLGAITNWDSRDI
CCCHHHHHCCCCCCEEEECCCCCCCHHCCCCCHHHHEEEEEECCCEEEEEEEECCCCCEE
TIDFSFLEKGKKFQAEIFSDGLNADKAATDYKKEIVTVDSTTKLKYRLANGGGLAMIIK
EEEEHHHHCCCCEEHHHHHCCCCCCHHHCCCCCEEEEECCCCEEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA