Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302578

Identifier: 146302578

GI number: 146302578

Start: 5871655

End: 5873397

Strand: Direct

Name: 146302578

Synonym: Fjoh_4851

Alternate gene names: NA

Gene position: 5871655-5873397 (Clockwise)

Preceding gene: 146302577

Following gene: 146302579

Centisome position: 96.31

GC content: 27.54

Gene sequence:

>1743_bases
ATGCTAGATAAAATAGTAAATATCATCAATGAAGAAACTTTTATAGGAGAAGATAATCTAGCCTATAAAAAAATCACATA
TGAAATTCTAATACCAAGAAAAACATATTTGAAAGGAATTATTTCAGGAAAATACAGAGGGATTAAAATCGATGACGATT
ATGAAAAAGCTGATTTATTTGATTTTGAAATTTATGAAGCAAATGTAATAACTGAAAGTCGAGATGACTTTAGAGCTAAC
AAACCTTTCATTTTTCCTAAAGATTTTGAAAATGTTATTAAGAGGAAAAGAATAAAAGGTGAAAAATTTCCAAAAGAAAA
ATTACCTAGAGATCTTGCCGTAACAATAAATGCGAATGAAAAGTTATTTGGAGTAAATCTGTTAGAACCTGAATTATTTG
AATTTGAAATAATAAGAAAACTTCATCAAACAGAAGGTGATGAAATTTTTGGATCATTTAATGCTTACATTACAGGATAT
ATTATTGATGAAACAAGTGAAATTGAAGAGAAAGTTATTTTAGTTCAAGATGAAGTAACTAGTATTTCAGAATCTCCCTC
AATTTGTGTATGTAGTAATATTGAAACAGGCAGAACAGAAATTAAAAACAATTATATCCGAAGAGAATATAAATGCAAAA
ATCATAATCATAATGTTTGGGGTAATTGGCAATATTTAAAAAATAGTCAACCATTAAATTTTAGAGCTCATAATACTAAC
AGCAATCCAGGGTGTGCAAGTCAAGGTTTTGGAATTCTTGGTATTTTATTCGGATTAGCATTTCTTATATTTATATTACC
AAGCATTTTATATATTATTGCTCTTTTCATAATTATTCTAGTTTTGGGTAATCTTGTATCATTTTTCAAACCATTCTTTA
GAATAATTGGAATATTATTTTTAATCGGATTTATTGCCTCTCTAATCCATTCTATTAGTAAACAATCACATACATATAAT
CCAAAACCTCTAATTGTTGATTCACCAAGAGAAGTAGCCCCATATATTCCTATTGACGAAACTAGACATGAAGACCAAAA
TATTGAAAATGATAGTATCATAACAAGATATAGATCTTGGAGAGATTATTCTGGAAACAAATATGAAGGTGAATATAAAA
TCAAGTTAAGCGATTATAAGAAAGCACATTTGTTCAAAGAAAGTCTTCCTTTAAGCTCAAATACTATAAATGCTTATGAT
AAGGTTATTTTTGATTTAAAAGAATTTGATAAAAATAATTTTAATAGTCTATTTAAACTTTTTGATAGTATTGGTAAAGC
AAAAAAATTAAACGAGATACAATTTGCTGAAATGATTGTAACATTTGTTCAAGATATACCATATGCTATAGTACTTGATA
AAGACTGCAATTCTAATTTATACAGTGATCGCTTTACAAAAAATTATCTTTTAAACAATAAAGGAGATTGCAGTGGAAAC
CAACGGTTCGGGATCAATACTCCCATAGAATTTTTAGTCAATCTAAAAGGAGATTGCGACACACGCACATTATTATTATA
CGGTATTTTAAGCCATTATAATTATGATATTGCACTTATGAGTAGTGAATTTTACGGACACTCAATAATTGGGATTAATT
TACCAATTAATGGTGCTACCTATGACTATAATGGCCAAAAATATATTCTGTGGGAAACAACAGCTCCAAATGCTAAACCC
GGAAATATACCAAATGAAATTTCAAATTTAAATAACTGGAGAATCTCCCTAAAATCAAAATAA

Upstream 100 bases:

>100_bases
TCCTTTTAGAACTAAAATGAGATTAATTACAAAGATTTCAAATAATGAAAAAGGACTACTAGACTTCCTCTACGATCAAA
AACCTGAAAACGATTAGAAA

Downstream 100 bases:

>100_bases
TCATGGACAAACAAAGTTTATTTTTCACTTGCCTTGTAGCAATAGTTTCAACTTTATTAATGTTAATGTCAATCCAATTT
TTAACCAAAAAATTAAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MLDKIVNIINEETFIGEDNLAYKKITYEILIPRKTYLKGIISGKYRGIKIDDDYEKADLFDFEIYEANVITESRDDFRAN
KPFIFPKDFENVIKRKRIKGEKFPKEKLPRDLAVTINANEKLFGVNLLEPELFEFEIIRKLHQTEGDEIFGSFNAYITGY
IIDETSEIEEKVILVQDEVTSISESPSICVCSNIETGRTEIKNNYIRREYKCKNHNHNVWGNWQYLKNSQPLNFRAHNTN
SNPGCASQGFGILGILFGLAFLIFILPSILYIIALFIIILVLGNLVSFFKPFFRIIGILFLIGFIASLIHSISKQSHTYN
PKPLIVDSPREVAPYIPIDETRHEDQNIENDSIITRYRSWRDYSGNKYEGEYKIKLSDYKKAHLFKESLPLSSNTINAYD
KVIFDLKEFDKNNFNSLFKLFDSIGKAKKLNEIQFAEMIVTFVQDIPYAIVLDKDCNSNLYSDRFTKNYLLNNKGDCSGN
QRFGINTPIEFLVNLKGDCDTRTLLLYGILSHYNYDIALMSSEFYGHSIIGINLPINGATYDYNGQKYILWETTAPNAKP
GNIPNEISNLNNWRISLKSK

Sequences:

>Translated_580_residues
MLDKIVNIINEETFIGEDNLAYKKITYEILIPRKTYLKGIISGKYRGIKIDDDYEKADLFDFEIYEANVITESRDDFRAN
KPFIFPKDFENVIKRKRIKGEKFPKEKLPRDLAVTINANEKLFGVNLLEPELFEFEIIRKLHQTEGDEIFGSFNAYITGY
IIDETSEIEEKVILVQDEVTSISESPSICVCSNIETGRTEIKNNYIRREYKCKNHNHNVWGNWQYLKNSQPLNFRAHNTN
SNPGCASQGFGILGILFGLAFLIFILPSILYIIALFIIILVLGNLVSFFKPFFRIIGILFLIGFIASLIHSISKQSHTYN
PKPLIVDSPREVAPYIPIDETRHEDQNIENDSIITRYRSWRDYSGNKYEGEYKIKLSDYKKAHLFKESLPLSSNTINAYD
KVIFDLKEFDKNNFNSLFKLFDSIGKAKKLNEIQFAEMIVTFVQDIPYAIVLDKDCNSNLYSDRFTKNYLLNNKGDCSGN
QRFGINTPIEFLVNLKGDCDTRTLLLYGILSHYNYDIALMSSEFYGHSIIGINLPINGATYDYNGQKYILWETTAPNAKP
GNIPNEISNLNNWRISLKSK
>Mature_580_residues
MLDKIVNIINEETFIGEDNLAYKKITYEILIPRKTYLKGIISGKYRGIKIDDDYEKADLFDFEIYEANVITESRDDFRAN
KPFIFPKDFENVIKRKRIKGEKFPKEKLPRDLAVTINANEKLFGVNLLEPELFEFEIIRKLHQTEGDEIFGSFNAYITGY
IIDETSEIEEKVILVQDEVTSISESPSICVCSNIETGRTEIKNNYIRREYKCKNHNHNVWGNWQYLKNSQPLNFRAHNTN
SNPGCASQGFGILGILFGLAFLIFILPSILYIIALFIIILVLGNLVSFFKPFFRIIGILFLIGFIASLIHSISKQSHTYN
PKPLIVDSPREVAPYIPIDETRHEDQNIENDSIITRYRSWRDYSGNKYEGEYKIKLSDYKKAHLFKESLPLSSNTINAYD
KVIFDLKEFDKNNFNSLFKLFDSIGKAKKLNEIQFAEMIVTFVQDIPYAIVLDKDCNSNLYSDRFTKNYLLNNKGDCSGN
QRFGINTPIEFLVNLKGDCDTRTLLLYGILSHYNYDIALMSSEFYGHSIIGINLPINGATYDYNGQKYILWETTAPNAKP
GNIPNEISNLNNWRISLKSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66945; Mature: 66945

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKIVNIINEETFIGEDNLAYKKITYEILIPRKTYLKGIISGKYRGIKIDDDYEKADLF
CHHHHHHHHCCCEECCCCCCEEEEEEEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCEE
DFEIYEANVITESRDDFRANKPFIFPKDFENVIKRKRIKGEKFPKEKLPRDLAVTINANE
EEEEEEEEEEECCCHHHCCCCCEECCHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEECCC
KLFGVNLLEPELFEFEIIRKLHQTEGDEIFGSFNAYITGYIIDETSEIEEKVILVQDEVT
EEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCCEEEEEEEECCCCCCCCEEEEEECHHH
SISESPSICVCSNIETGRTEIKNNYIRREYKCKNHNHNVWGNWQYLKNSQPLNFRAHNTN
HHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECCCC
SNPGCASQGFGILGILFGLAFLIFILPSILYIIALFIIILVLGNLVSFFKPFFRIIGILF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGFIASLIHSISKQSHTYNPKPLIVDSPREVAPYIPIDETRHEDQNIENDSIITRYRSW
HHHHHHHHHHHHHHCCCCCCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
RDYSGNKYEGEYKIKLSDYKKAHLFKESLPLSSNTINAYDKVIFDLKEFDKNNFNSLFKL
CCCCCCEECCEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
FDSIGKAKKLNEIQFAEMIVTFVQDIPYAIVLDKDCNSNLYSDRFTKNYLLNNKGDCSGN
HHHHCCHHHCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCC
QRFGINTPIEFLVNLKGDCDTRTLLLYGILSHYNYDIALMSSEFYGHSIIGINLPINGAT
CEECCCCCHHEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCE
YDYNGQKYILWETTAPNAKPGNIPNEISNLNNWRISLKSK
EEECCCEEEEEECCCCCCCCCCCCHHHHCCCCEEEEEECC
>Mature Secondary Structure
MLDKIVNIINEETFIGEDNLAYKKITYEILIPRKTYLKGIISGKYRGIKIDDDYEKADLF
CHHHHHHHHCCCEECCCCCCEEEEEEEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCEE
DFEIYEANVITESRDDFRANKPFIFPKDFENVIKRKRIKGEKFPKEKLPRDLAVTINANE
EEEEEEEEEEECCCHHHCCCCCEECCHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEECCC
KLFGVNLLEPELFEFEIIRKLHQTEGDEIFGSFNAYITGYIIDETSEIEEKVILVQDEVT
EEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCCEEEEEEEECCCCCCCCEEEEEECHHH
SISESPSICVCSNIETGRTEIKNNYIRREYKCKNHNHNVWGNWQYLKNSQPLNFRAHNTN
HHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECCCC
SNPGCASQGFGILGILFGLAFLIFILPSILYIIALFIIILVLGNLVSFFKPFFRIIGILF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGFIASLIHSISKQSHTYNPKPLIVDSPREVAPYIPIDETRHEDQNIENDSIITRYRSW
HHHHHHHHHHHHHHCCCCCCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
RDYSGNKYEGEYKIKLSDYKKAHLFKESLPLSSNTINAYDKVIFDLKEFDKNNFNSLFKL
CCCCCCEECCEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
FDSIGKAKKLNEIQFAEMIVTFVQDIPYAIVLDKDCNSNLYSDRFTKNYLLNNKGDCSGN
HHHHCCHHHCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCC
QRFGINTPIEFLVNLKGDCDTRTLLLYGILSHYNYDIALMSSEFYGHSIIGINLPINGAT
CEECCCCCHHEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCE
YDYNGQKYILWETTAPNAKPGNIPNEISNLNNWRISLKSK
EEECCCEEEEEECCCCCCCCCCCCHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA