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The map label for this gene is nodC [H]

Identifier: 146302567

GI number: 146302567

Start: 5856397

End: 5857833

Strand: Reverse

Name: nodC [H]

Synonym: Fjoh_4840

Alternate gene names: 146302567

Gene position: 5857833-5856397 (Counterclockwise)

Preceding gene: 146302570

Following gene: 146302565

Centisome position: 96.08

GC content: 34.86

Gene sequence:

>1437_bases
ATGGAAAGCGAAACAATTATCTCGAAACAATTTTACACTGGCAGCAATAGCGCCGATGTACAAATAAGCCCTTCTATTTT
TAAAATAAACAACAACTCAACCAAAAAACATATTGAAAGACCAAAAAGTGCTTTCGGATTTATGATCCTTGCAGGTACAT
TTTTGTTACTGCTGACCGGAGCTTTTTTCGTTTTTCAATTTCAGCCGGATTTTGATCAGCTTCATTTAGAAAGATTAAAT
TCTACAGGCGGAATTATTTTTCTTGCCGTAACGGTAGCATTATTTCTTTTTAAAGGCGGTATGTTTCTTTACAATTTATA
CCTTTATTTTAAATACAAACCAATTGAATCAGTTTCTGATGAATTACTGCCAACTTGTACCGTGATTGTTCCGGCTTACA
ACGAAGGAAAATTGGTTTACGAAACTTTAATGAGTTTAGCAGAAAGTGATTTCCCAGCACACAAATTAGAGCTTTTAGCT
ATTGATGATGGAAGTAAAGATGATACATGGTACTGGATTCAGCAGGCTAAAATTAAATTGGGAGATCGTGTTTCAATTTT
TCAACAACCTCAAAATAAAGGTAAACGCCACGCATTATACCGTGGATTTAACTTAGGAAAAGGAGAAGTTTTTGTAACAG
TTGATAGTGATTCAATTGTGAAAAAAGATACTTTAAGAAACTTAGTAAGCCCGTTTGTTGTTGACGAAAAATGCGGTGCC
GTTGCAGGAAATGTTCAGGTTTTGAACAACGAAAAAGCAATTCTGCCAAAAATGCTTAATGTAAGTTTTGTAATGAGTTT
TGAGTTCATGCGTTCTGCAGAAAGTTCGTTAGGTTCAGTACTTTGTACTCCGGGAGCTTTGGCTGCTTACAGAAGAAATG
CCGTTTTTGCCTGTCTGCCAGAATGGATCGACCAGACTTTTATGGGACAGCCGTCTGATATTGGTGAAGACCGTGCCATG
ACAAATATGATCTTAAAACAAGGACACCATGTATTGTTTCAGCGTAATGCTTATGTTTTAACAAATGTTCCTGAAGATTA
CAAAGGTTTATACAAAATGTTCATTAGATGGGGAAGAAGTAATGTTCGTGAGAATATTATGATGGCAAAATACGTTTGGA
AAGATTTTAGAAAAGAATCTAAAGTTGGAGCAAGATTATTGTTTACAGAACAGTCTATCAGAATCATCATGACGTATCCT
TTCTTTATCTTTATGTTCTATTTTATTGCAACGCATCCATTATTATTTATTAGTTCAGCGTTATTAGGAATATTAATTGT
ATCAAGCTTTTCAGTATTGTTTTATGCAAAAAGATATTCTTTTACAGAAGCATTCTGGGCGTATTCATATAGTGTTTTCT
ACACTTTCGGATTGTTTTGGATCGCTCCGTATTCAATCATTACAGCTCATAAAAGAGGCTGGCTGACTAGAGGTTAA

Upstream 100 bases:

>100_bases
GATAGTGTCACTCTTTAACTTTTAATTGTTTACTAAACAAAATACAAAAGAAAGAGAGCATTTGATAAAAGCCATTTTAG
AGAATTAAAACAAACAGGAC

Downstream 100 bases:

>100_bases
GAAATTTCCACAACTACTATTTTATATTTAATCCTGAAAAACTCCTGTTCCACTAAGCAGGAGTTTTTTTTATGCTTTTA
TTGCAGCGAGGCTATTACGT

Product: hyaluronan synthase

Products: NA

Alternate protein names: Nodulation protein C [H]

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MESETIISKQFYTGSNSADVQISPSIFKINNNSTKKHIERPKSAFGFMILAGTFLLLLTGAFFVFQFQPDFDQLHLERLN
STGGIIFLAVTVALFLFKGGMFLYNLYLYFKYKPIESVSDELLPTCTVIVPAYNEGKLVYETLMSLAESDFPAHKLELLA
IDDGSKDDTWYWIQQAKIKLGDRVSIFQQPQNKGKRHALYRGFNLGKGEVFVTVDSDSIVKKDTLRNLVSPFVVDEKCGA
VAGNVQVLNNEKAILPKMLNVSFVMSFEFMRSAESSLGSVLCTPGALAAYRRNAVFACLPEWIDQTFMGQPSDIGEDRAM
TNMILKQGHHVLFQRNAYVLTNVPEDYKGLYKMFIRWGRSNVRENIMMAKYVWKDFRKESKVGARLLFTEQSIRIIMTYP
FFIFMFYFIATHPLLFISSALLGILIVSSFSVLFYAKRYSFTEAFWAYSYSVFYTFGLFWIAPYSIITAHKRGWLTRG

Sequences:

>Translated_478_residues
MESETIISKQFYTGSNSADVQISPSIFKINNNSTKKHIERPKSAFGFMILAGTFLLLLTGAFFVFQFQPDFDQLHLERLN
STGGIIFLAVTVALFLFKGGMFLYNLYLYFKYKPIESVSDELLPTCTVIVPAYNEGKLVYETLMSLAESDFPAHKLELLA
IDDGSKDDTWYWIQQAKIKLGDRVSIFQQPQNKGKRHALYRGFNLGKGEVFVTVDSDSIVKKDTLRNLVSPFVVDEKCGA
VAGNVQVLNNEKAILPKMLNVSFVMSFEFMRSAESSLGSVLCTPGALAAYRRNAVFACLPEWIDQTFMGQPSDIGEDRAM
TNMILKQGHHVLFQRNAYVLTNVPEDYKGLYKMFIRWGRSNVRENIMMAKYVWKDFRKESKVGARLLFTEQSIRIIMTYP
FFIFMFYFIATHPLLFISSALLGILIVSSFSVLFYAKRYSFTEAFWAYSYSVFYTFGLFWIAPYSIITAHKRGWLTRG
>Mature_478_residues
MESETIISKQFYTGSNSADVQISPSIFKINNNSTKKHIERPKSAFGFMILAGTFLLLLTGAFFVFQFQPDFDQLHLERLN
STGGIIFLAVTVALFLFKGGMFLYNLYLYFKYKPIESVSDELLPTCTVIVPAYNEGKLVYETLMSLAESDFPAHKLELLA
IDDGSKDDTWYWIQQAKIKLGDRVSIFQQPQNKGKRHALYRGFNLGKGEVFVTVDSDSIVKKDTLRNLVSPFVVDEKCGA
VAGNVQVLNNEKAILPKMLNVSFVMSFEFMRSAESSLGSVLCTPGALAAYRRNAVFACLPEWIDQTFMGQPSDIGEDRAM
TNMILKQGHHVLFQRNAYVLTNVPEDYKGLYKMFIRWGRSNVRENIMMAKYVWKDFRKESKVGARLLFTEQSIRIIMTYP
FFIFMFYFIATHPLLFISSALLGILIVSSFSVLFYAKRYSFTEAFWAYSYSVFYTFGLFWIAPYSIITAHKRGWLTRG

Specific function: Involved in the synthesis of Nod factor, a sulfated N- acyl-beta-1,4-tetrasaccharide of N-acetylglucosamine which initiates a series of events in the host plant species leading eventually to nodulation [H]

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nodC/HAS family [H]

Homologues:

Organism=Homo sapiens, GI4885391, Length=293, Percent_Identity=30.3754266211604, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI20302153, Length=318, Percent_Identity=27.0440251572327, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI167466171, Length=173, Percent_Identity=29.4797687861272, Blast_Score=83, Evalue=7e-16,
Organism=Escherichia coli, GI1787259, Length=256, Percent_Identity=24.609375, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 54652; Mature: 54652

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESETIISKQFYTGSNSADVQISPSIFKINNNSTKKHIERPKSAFGFMILAGTFLLLLTG
CCCCCEEEEEEECCCCCCCEEECCEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
AFFVFQFQPDFDQLHLERLNSTGGIIFLAVTVALFLFKGGMFLYNLYLYFKYKPIESVSD
HHEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHEEEEEEEEECCHHHHHH
ELLPTCTVIVPAYNEGKLVYETLMSLAESDFPAHKLELLAIDDGSKDDTWYWIQQAKIKL
HHCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEHEECC
GDRVSIFQQPQNKGKRHALYRGFNLGKGEVFVTVDSDSIVKKDTLRNLVSPFVVDEKCGA
CCEEHHHHCCCCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEECCCCCC
VAGNVQVLNNEKAILPKMLNVSFVMSFEFMRSAESSLGSVLCTPGALAAYRRNAVFACLP
EECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHCCCCEEECH
EWIDQTFMGQPSDIGEDRAMTNMILKQGHHVLFQRNAYVLTNVPEDYKGLYKMFIRWGRS
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHH
NVRENIMMAKYVWKDFRKESKVGARLLFTEQSIRIIMTYPFFIFMFYFIATHPLLFISSA
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
LLGILIVSSFSVLFYAKRYSFTEAFWAYSYSVFYTFGLFWIAPYSIITAHKRGWLTRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCCCC
>Mature Secondary Structure
MESETIISKQFYTGSNSADVQISPSIFKINNNSTKKHIERPKSAFGFMILAGTFLLLLTG
CCCCCEEEEEEECCCCCCCEEECCEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
AFFVFQFQPDFDQLHLERLNSTGGIIFLAVTVALFLFKGGMFLYNLYLYFKYKPIESVSD
HHEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHEEEEEEEEECCHHHHHH
ELLPTCTVIVPAYNEGKLVYETLMSLAESDFPAHKLELLAIDDGSKDDTWYWIQQAKIKL
HHCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEHEECC
GDRVSIFQQPQNKGKRHALYRGFNLGKGEVFVTVDSDSIVKKDTLRNLVSPFVVDEKCGA
CCEEHHHHCCCCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEECCCCCC
VAGNVQVLNNEKAILPKMLNVSFVMSFEFMRSAESSLGSVLCTPGALAAYRRNAVFACLP
EECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHCCCCEEECH
EWIDQTFMGQPSDIGEDRAMTNMILKQGHHVLFQRNAYVLTNVPEDYKGLYKMFIRWGRS
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHH
NVRENIMMAKYVWKDFRKESKVGARLLFTEQSIRIIMTYPFFIFMFYFIATHPLLFISSA
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
LLGILIVSSFSVLFYAKRYSFTEAFWAYSYSVFYTFGLFWIAPYSIITAHKRGWLTRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2615763; 8146173 [H]