Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302565

Identifier: 146302565

GI number: 146302565

Start: 5854887

End: 5855276

Strand: Reverse

Name: 146302565

Synonym: Fjoh_4838

Alternate gene names: NA

Gene position: 5855276-5854887 (Counterclockwise)

Preceding gene: 146302567

Following gene: 146302564

Centisome position: 96.04

GC content: 33.08

Gene sequence:

>390_bases
ATGAAACGATTACTGTATATAACTTGTTTTTTATTATTGGTGTTTTTTGCAGCTGCAAAAAATGTCCAAAAAGTTCATAT
ACACAACAATCAGCATTTATCCGGCAGTCATATTTTGGGTAATGATCAGTCTGTATCTCAAAATGATTCAGCTGTTTTTG
CTGATATTAACGATGAGTCTTATTCTGAAGATATTGAAGATATTGATTTGGGCGATTATGGTTTTGATCATTTCGCCTTT
CTAGATTCTAATGCAGTATTTAGTTTTATCTTCAGCCAGCAGTCTTATAAGTCAGCTTTGTATGCAAATGGTTCTCACCA
AATAGTGCATGCAGCAACAATTCCCCTTTACATTTTATTTCATTCCATGATTATTCCTTCGGCGAATTAA

Upstream 100 bases:

>100_bases
ATTACAGAAAAAGGATACAAAAGTCGTGATTTGTGAAAGCAAAACAGTTGAGCTCTTTCATAATTTTGTTTCTGGTTTTT
AAAAGGAACTATTTAAAAGA

Downstream 100 bases:

>100_bases
ATCGGGTTTTACTATTACTTCTTTTTTTTAGGAAATCATTTCAATTAGACAGATTATGATCTCATAATCATATTCTTCTG
TTGTATTTCTTCCAAAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKRLLYITCFLLLVFFAAAKNVQKVHIHNNQHLSGSHILGNDQSVSQNDSAVFADINDESYSEDIEDIDLGDYGFDHFAF
LDSNAVFSFIFSQQSYKSALYANGSHQIVHAATIPLYILFHSMIIPSAN

Sequences:

>Translated_129_residues
MKRLLYITCFLLLVFFAAAKNVQKVHIHNNQHLSGSHILGNDQSVSQNDSAVFADINDESYSEDIEDIDLGDYGFDHFAF
LDSNAVFSFIFSQQSYKSALYANGSHQIVHAATIPLYILFHSMIIPSAN
>Mature_129_residues
MKRLLYITCFLLLVFFAAAKNVQKVHIHNNQHLSGSHILGNDQSVSQNDSAVFADINDESYSEDIEDIDLGDYGFDHFAF
LDSNAVFSFIFSQQSYKSALYANGSHQIVHAATIPLYILFHSMIIPSAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14460; Mature: 14460

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLYITCFLLLVFFAAAKNVQKVHIHNNQHLSGSHILGNDQSVSQNDSAVFADINDES
CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEECCCCC
YSEDIEDIDLGDYGFDHFAFLDSNAVFSFIFSQQSYKSALYANGSHQIVHAATIPLYILF
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCHHHHHHEEECCCCEEEEHHHHHHHHHH
HSMIIPSAN
HHHHCCCCC
>Mature Secondary Structure
MKRLLYITCFLLLVFFAAAKNVQKVHIHNNQHLSGSHILGNDQSVSQNDSAVFADINDES
CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEECCCCC
YSEDIEDIDLGDYGFDHFAFLDSNAVFSFIFSQQSYKSALYANGSHQIVHAATIPLYILF
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCHHHHHHEEECCCCEEEEHHHHHHHHHH
HSMIIPSAN
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA