| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is sglT [H]
Identifier: 146302545
GI number: 146302545
Start: 5831213
End: 5832718
Strand: Direct
Name: sglT [H]
Synonym: Fjoh_4818
Alternate gene names: 146302545
Gene position: 5831213-5832718 (Clockwise)
Preceding gene: 146302544
Following gene: 146302546
Centisome position: 95.64
GC content: 33.33
Gene sequence:
>1506_bases ATGACACCAACTACCATTCTTCTCCTTATTATCGTTTATTTCGGAACCCTATTCTATATCTCACACAGAGTGAGCAGAAA AGACAGCGGAAATGATGCTTTTTTTACAGCCAATAAAAACTCCAAATGGTATTTAGTTGCTTTTGGAATGATTGGAACTG CTCTTTCCGGAGTAACCTTTATATCCGTTCCCGGAGAAGTTGGCGCACCAAGCGGTGAACAATTCAAATATTTTCAGTTC GTTTTAGGAAATGCTCTTGGTTTTATTGTAATCACAAAACTATTGCTGCCGTTGTATTACCGAATGAACCTGACTTCAAT TTATGGTTATATTGAACAAAGAATGGGGCTTTACAGTTACAAAACTGCCGCTTCTATTTTCTTAATCAGCAGAACCATAA GTTCAGCATTCAGGCTTTATCTTGTTGTAATTGTATTGCAGCGTTTTGTATTCGATTACTTTCATATTCCATTTGCCTTG ACAGTATTAATCTCTTTACTGCTTATTTTCTCTTATACGTACAGAGGCGGATTAAAAACGATTATTATTACTGATACTTT ACAAACGTTTTTTCTAGTAACATCAGTTTTTCTTACTATTTATTTCATCTGCGACCGTATGGATTTAAGTGCCATCAGCG CATTTGAAGAAGTAAAAAACAGCAACTATTCTAAAATATTTTTCTTTGATGATTTCTTCGGAAGCAAATTCCATTTTGTA AAACAAATTTTAGGCGGAATGTTCGTAACCATCGCCATGACAGGTCTGGATCAGGATTTAATGCAAAAAAACCTGAGCTG TAAAAACATTGGCGAAGCACAAAAAAATATGTTCACTTTTACAGGAATCTTTGTAGTTATTAATATTTTCTTTTTAAGTG TTGGAGCTCTATTATATATTTATGCTAATAAAAACGGAATCGCTATTCCAACTGATTTAGTTACAGGAAAACCCAGAACC GATTTACTCTTTCCTGAAATTGCCTTAAATCATTTAGCAGTAGTTCCAGCCATTGTGTTTTTACTGGGAATTATCGCGGC GACTTTTGCCACAACAGATTCGGCATTAACAGCTTTAACAACTTCTTTTTGTGTTGACTTTTTAGGAATGGATAAAAGTG AAAATACCAAAAAAAATACCGTTAGAACCAGACATTTAGTACACATCAGTTTTTCGGTATTAATTTTCTTTGTCATTATT ATTTTCAATACCATCAACGACAGTTCTGTTGTGGGAATGATTTTCAAAGTTGCTTCTTATACTTACGGTCCATTATTAGG GTTATATGCTTTTGGATTGTTCCAAAAATCAAGATATGTAAACGATAAGTTAGTACCGTTTATTTGTCTCTTGGCTCCTT TCCTAACCTATTTAATAAATGAAAACTCGAAACTATTATTTTCAGGATATGTTTTTGACAATGAGTTAATTGTACTGAAC GGATTAATCACCTATTTAGGATTATATATAACAAGTTCTCGAAGCCACGAAAAAATAAGTTTTTAA
Upstream 100 bases:
>100_bases AGTTTTTAACGGCGACCTGACCGATTAACAATCTGTCAGGTCAAATTAAAATCCGTTATTTGAATAAATTATAAAAAACC AAAACCACCAAAACTATAAA
Downstream 100 bases:
>100_bases TCGGTTTAAAAACGCAAATAATTTACCCAGCCAATTGACGTTTAAAACAAAACTTCAATTGATTCAAAAAAAATAGTATG AAAGATTACATCATAAAGAT
Product: Na+/solute symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MTPTTILLLIIVYFGTLFYISHRVSRKDSGNDAFFTANKNSKWYLVAFGMIGTALSGVTFISVPGEVGAPSGEQFKYFQF VLGNALGFIVITKLLLPLYYRMNLTSIYGYIEQRMGLYSYKTAASIFLISRTISSAFRLYLVVIVLQRFVFDYFHIPFAL TVLISLLLIFSYTYRGGLKTIIITDTLQTFFLVTSVFLTIYFICDRMDLSAISAFEEVKNSNYSKIFFFDDFFGSKFHFV KQILGGMFVTIAMTGLDQDLMQKNLSCKNIGEAQKNMFTFTGIFVVINIFFLSVGALLYIYANKNGIAIPTDLVTGKPRT DLLFPEIALNHLAVVPAIVFLLGIIAATFATTDSALTALTTSFCVDFLGMDKSENTKKNTVRTRHLVHISFSVLIFFVII IFNTINDSSVVGMIFKVASYTYGPLLGLYAFGLFQKSRYVNDKLVPFICLLAPFLTYLINENSKLLFSGYVFDNELIVLN GLITYLGLYITSSRSHEKISF
Sequences:
>Translated_501_residues MTPTTILLLIIVYFGTLFYISHRVSRKDSGNDAFFTANKNSKWYLVAFGMIGTALSGVTFISVPGEVGAPSGEQFKYFQF VLGNALGFIVITKLLLPLYYRMNLTSIYGYIEQRMGLYSYKTAASIFLISRTISSAFRLYLVVIVLQRFVFDYFHIPFAL TVLISLLLIFSYTYRGGLKTIIITDTLQTFFLVTSVFLTIYFICDRMDLSAISAFEEVKNSNYSKIFFFDDFFGSKFHFV KQILGGMFVTIAMTGLDQDLMQKNLSCKNIGEAQKNMFTFTGIFVVINIFFLSVGALLYIYANKNGIAIPTDLVTGKPRT DLLFPEIALNHLAVVPAIVFLLGIIAATFATTDSALTALTTSFCVDFLGMDKSENTKKNTVRTRHLVHISFSVLIFFVII IFNTINDSSVVGMIFKVASYTYGPLLGLYAFGLFQKSRYVNDKLVPFICLLAPFLTYLINENSKLLFSGYVFDNELIVLN GLITYLGLYITSSRSHEKISF >Mature_500_residues TPTTILLLIIVYFGTLFYISHRVSRKDSGNDAFFTANKNSKWYLVAFGMIGTALSGVTFISVPGEVGAPSGEQFKYFQFV LGNALGFIVITKLLLPLYYRMNLTSIYGYIEQRMGLYSYKTAASIFLISRTISSAFRLYLVVIVLQRFVFDYFHIPFALT VLISLLLIFSYTYRGGLKTIIITDTLQTFFLVTSVFLTIYFICDRMDLSAISAFEEVKNSNYSKIFFFDDFFGSKFHFVK QILGGMFVTIAMTGLDQDLMQKNLSCKNIGEAQKNMFTFTGIFVVINIFFLSVGALLYIYANKNGIAIPTDLVTGKPRTD LLFPEIALNHLAVVPAIVFLLGIIAATFATTDSALTALTTSFCVDFLGMDKSENTKKNTVRTRHLVHISFSVLIFFVIII FNTINDSSVVGMIFKVASYTYGPLLGLYAFGLFQKSRYVNDKLVPFICLLAPFLTYLINENSKLLFSGYVFDNELIVLNG LITYLGLYITSSRSHEKISF
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI157671931, Length=440, Percent_Identity=23.1818181818182, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI4507035, Length=441, Percent_Identity=20.6349206349206, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI167466278, Length=414, Percent_Identity=22.9468599033816, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI256985183, Length=433, Percent_Identity=21.9399538106236, Blast_Score=66, Evalue=8e-11, Organism=Drosophila melanogaster, GI24640370, Length=455, Percent_Identity=23.5164835164835, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI28573698, Length=462, Percent_Identity=22.5108225108225, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI221459584, Length=467, Percent_Identity=21.1991434689507, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI28574994, Length=389, Percent_Identity=26.2210796915167, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI221459582, Length=453, Percent_Identity=22.2958057395143, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI221459588, Length=434, Percent_Identity=21.4285714285714, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI221459586, Length=442, Percent_Identity=21.0407239819005, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24641117, Length=436, Percent_Identity=23.8532110091743, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24650192, Length=429, Percent_Identity=21.4452214452214, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24645928, Length=457, Percent_Identity=21.0065645514223, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24651739, Length=430, Percent_Identity=20.9302325581395, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 56366; Mature: 56235
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTTILLLIIVYFGTLFYISHRVSRKDSGNDAFFTANKNSKWYLVAFGMIGTALSGVTF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHCCCEE ISVPGEVGAPSGEQFKYFQFVLGNALGFIVITKLLLPLYYRMNLTSIYGYIEQRMGLYSY EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH KTAASIFLISRTISSAFRLYLVVIVLQRFVFDYFHIPFALTVLISLLLIFSYTYRGGLKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IIITDTLQTFFLVTSVFLTIYFICDRMDLSAISAFEEVKNSNYSKIFFFDDFFGSKFHFV EEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH KQILGGMFVTIAMTGLDQDLMQKNLSCKNIGEAQKNMFTFTGIFVVINIFFLSVGALLYI HHHHCHHEEEHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEE YANKNGIAIPTDLVTGKPRTDLLFPEIALNHLAVVPAIVFLLGIIAATFATTDSALTALT EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH TSFCVDFLGMDKSENTKKNTVRTRHLVHISFSVLIFFVIIIFNTINDSSVVGMIFKVASY HHHHHHHHCCCCCCCCHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TYGPLLGLYAFGLFQKSRYVNDKLVPFICLLAPFLTYLINENSKLLFSGYVFDNELIVLN HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEHH GLITYLGLYITSSRSHEKISF HHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TPTTILLLIIVYFGTLFYISHRVSRKDSGNDAFFTANKNSKWYLVAFGMIGTALSGVTF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHCCCEE ISVPGEVGAPSGEQFKYFQFVLGNALGFIVITKLLLPLYYRMNLTSIYGYIEQRMGLYSY EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH KTAASIFLISRTISSAFRLYLVVIVLQRFVFDYFHIPFALTVLISLLLIFSYTYRGGLKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IIITDTLQTFFLVTSVFLTIYFICDRMDLSAISAFEEVKNSNYSKIFFFDDFFGSKFHFV EEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH KQILGGMFVTIAMTGLDQDLMQKNLSCKNIGEAQKNMFTFTGIFVVINIFFLSVGALLYI HHHHCHHEEEHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEE YANKNGIAIPTDLVTGKPRTDLLFPEIALNHLAVVPAIVFLLGIIAATFATTDSALTALT EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH TSFCVDFLGMDKSENTKKNTVRTRHLVHISFSVLIFFVIIIFNTINDSSVVGMIFKVASY HHHHHHHHCCCCCCCCHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TYGPLLGLYAFGLFQKSRYVNDKLVPFICLLAPFLTYLINENSKLLFSGYVFDNELIVLN HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEHH GLITYLGLYITSSRSHEKISF HHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]