| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302521
Identifier: 146302521
GI number: 146302521
Start: 5791934
End: 5793226
Strand: Reverse
Name: 146302521
Synonym: Fjoh_4794
Alternate gene names: NA
Gene position: 5793226-5791934 (Counterclockwise)
Preceding gene: 146302522
Following gene: 146302520
Centisome position: 95.02
GC content: 32.17
Gene sequence:
>1293_bases ATGGAGCAGGATATTACACTAGAATTAAGAAGTGAAGAAATTCAGGATGTGCTTTCAAAAACACCCATTTGGATGATTCG ATGGGGGACGATTGTAATATTTTCAATAATCGTTATACTGTTTTATGTGTCATACATTATAAGATATCCGGATGTTGTAA GTACAGAAATTGTCATTACAACTAATATTCCGCCGGAGAAATTAGTCTCTAAATCATCCGGTCGAATAGAAGCTATACTA ATAAGCGATAAAGCAACAGTTAAAAAAAATACGATGCTGGCTGTTATTGAAAATTCGGCAAATTATAAAGATGTCTTTTT ACTCAAAAAGATTATTGCTGATTTTGATATTAATGATACAAAAAAAGAATTTCCTTTTGCCGTAATGAAAAACAAACAAC TGGGTGAAATTGAAAGTGCTTTTGCTATTTTTCAAAAAGACTATGAAGTTGAAAAACTAAATGAAAATTTACATCCTTTT GATGTTGAAAATAAAGCACAGGTTTCTGAAAAAACTCAAATTAAAGAAAGGTTAGAAATTTTACAGCAGCAAAAAGAAAT TAATGAAAGCGAGTTACAGCTTCAAAAAAACGAAATAGGCCGATTTGGAATTCTTTTTAATAAAGGCATTATATCGGCTC AGGAAATGGAAACTAAAAAGCTCAGCTATCTGCAGGCTCAGAAAAATTACAAAACCTTATTGTCATCGATTTCTCAGTTA AAATCTTCTTTGATCGATAATACAAAAATGGGGCATAATTTGCAGATAAGCAGCACTAAAGAAGAAGTGAATCTAAACAG GAACATGGCACAGTCTTTTTATCAGCTGAAAAAAGTGATAAAGGAATGGGAGCTTACGAATACCTTAAGATCTTCGGTTA GCGGCGTAGTTACTTTTTTGCAGGTTTGGACAGAAAACCAAACGATTAATGAAGGAGATAATGTTTTTTCGATTATTCCG GATAAAGAAAATGGTTTTGTTGGAAAAGTAAAAGCAACACCTTTAAATTCAGGAAAAATAAAAGTTGGTCAAAACGTAAA CATAAGACTGGCTAATTTTCCTGATAGAGAATTTGGAGTATTAAGAGGTAAAATTCATAATATTTCGCTGGTTCCGGACA AAGATGGAAACTTATTATTAGACGTTTCTCTTCCAGATGGTTTACAGACATCTTACAGGAAAAGAATCCCATTTCAGCAG GAAATGAAAGGAAAAGCAGAAATCCTGACAGAAGACTTAAGATTAATTGAAAGGATTTTATATCAGTTCAAAAGTATTTT TGAGCAGGTTTAG
Upstream 100 bases:
>100_bases AGGAAAAATCATCGAAATAGGAAATCATACTACTCTTGTAGAGCAGAGAGGAAATTATTTTGAGTTGGTTAAAAATCAAT TACAGCTTGGAAATTAAATT
Downstream 100 bases:
>100_bases TCTTCTGCTTATTTTATATAAAGAGCCTGTAAGCTTAATGTTTACAGGCTTTTTTATGCATTAATGAGATTGTAATTGAG TTTCTAATTCTAGTCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MEQDITLELRSEEIQDVLSKTPIWMIRWGTIVIFSIIVILFYVSYIIRYPDVVSTEIVITTNIPPEKLVSKSSGRIEAIL ISDKATVKKNTMLAVIENSANYKDVFLLKKIIADFDINDTKKEFPFAVMKNKQLGEIESAFAIFQKDYEVEKLNENLHPF DVENKAQVSEKTQIKERLEILQQQKEINESELQLQKNEIGRFGILFNKGIISAQEMETKKLSYLQAQKNYKTLLSSISQL KSSLIDNTKMGHNLQISSTKEEVNLNRNMAQSFYQLKKVIKEWELTNTLRSSVSGVVTFLQVWTENQTINEGDNVFSIIP DKENGFVGKVKATPLNSGKIKVGQNVNIRLANFPDREFGVLRGKIHNISLVPDKDGNLLLDVSLPDGLQTSYRKRIPFQQ EMKGKAEILTEDLRLIERILYQFKSIFEQV
Sequences:
>Translated_430_residues MEQDITLELRSEEIQDVLSKTPIWMIRWGTIVIFSIIVILFYVSYIIRYPDVVSTEIVITTNIPPEKLVSKSSGRIEAIL ISDKATVKKNTMLAVIENSANYKDVFLLKKIIADFDINDTKKEFPFAVMKNKQLGEIESAFAIFQKDYEVEKLNENLHPF DVENKAQVSEKTQIKERLEILQQQKEINESELQLQKNEIGRFGILFNKGIISAQEMETKKLSYLQAQKNYKTLLSSISQL KSSLIDNTKMGHNLQISSTKEEVNLNRNMAQSFYQLKKVIKEWELTNTLRSSVSGVVTFLQVWTENQTINEGDNVFSIIP DKENGFVGKVKATPLNSGKIKVGQNVNIRLANFPDREFGVLRGKIHNISLVPDKDGNLLLDVSLPDGLQTSYRKRIPFQQ EMKGKAEILTEDLRLIERILYQFKSIFEQV >Mature_430_residues MEQDITLELRSEEIQDVLSKTPIWMIRWGTIVIFSIIVILFYVSYIIRYPDVVSTEIVITTNIPPEKLVSKSSGRIEAIL ISDKATVKKNTMLAVIENSANYKDVFLLKKIIADFDINDTKKEFPFAVMKNKQLGEIESAFAIFQKDYEVEKLNENLHPF DVENKAQVSEKTQIKERLEILQQQKEINESELQLQKNEIGRFGILFNKGIISAQEMETKKLSYLQAQKNYKTLLSSISQL KSSLIDNTKMGHNLQISSTKEEVNLNRNMAQSFYQLKKVIKEWELTNTLRSSVSGVVTFLQVWTENQTINEGDNVFSIIP DKENGFVGKVKATPLNSGKIKVGQNVNIRLANFPDREFGVLRGKIHNISLVPDKDGNLLLDVSLPDGLQTSYRKRIPFQQ EMKGKAEILTEDLRLIERILYQFKSIFEQV
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49332; Mature: 49332
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQDITLELRSEEIQDVLSKTPIWMIRWGTIVIFSIIVILFYVSYIIRYPDVVSTEIVIT CCCCEEEEECHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE TNIPPEKLVSKSSGRIEAILISDKATVKKNTMLAVIENSANYKDVFLLKKIIADFDINDT ECCCHHHHHCCCCCCEEEEEECCCCEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCC KKEFPFAVMKNKQLGEIESAFAIFQKDYEVEKLNENLHPFDVENKAQVSEKTQIKERLEI HHHCCCHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LQQQKEINESELQLQKNEIGRFGILFNKGIISAQEMETKKLSYLQAQKNYKTLLSSISQL HHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSSLIDNTKMGHNLQISSTKEEVNLNRNMAQSFYQLKKVIKEWELTNTLRSSVSGVVTFL HHHHHCCCCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVWTENQTINEGDNVFSIIPDKENGFVGKVKATPLNSGKIKVGQNVNIRLANFPDREFGV HHHCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEECCCCEEEEECCCCHHHHH LRGKIHNISLVPDKDGNLLLDVSLPDGLQTSYRKRIPFQQEMKGKAEILTEDLRLIERIL HHCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH YQFKSIFEQV HHHHHHHHCC >Mature Secondary Structure MEQDITLELRSEEIQDVLSKTPIWMIRWGTIVIFSIIVILFYVSYIIRYPDVVSTEIVIT CCCCEEEEECHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE TNIPPEKLVSKSSGRIEAILISDKATVKKNTMLAVIENSANYKDVFLLKKIIADFDINDT ECCCHHHHHCCCCCCEEEEEECCCCEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCC KKEFPFAVMKNKQLGEIESAFAIFQKDYEVEKLNENLHPFDVENKAQVSEKTQIKERLEI HHHCCCHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LQQQKEINESELQLQKNEIGRFGILFNKGIISAQEMETKKLSYLQAQKNYKTLLSSISQL HHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSSLIDNTKMGHNLQISSTKEEVNLNRNMAQSFYQLKKVIKEWELTNTLRSSVSGVVTFL HHHHHCCCCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVWTENQTINEGDNVFSIIPDKENGFVGKVKATPLNSGKIKVGQNVNIRLANFPDREFGV HHHCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEECCCCEEEEECCCCHHHHH LRGKIHNISLVPDKDGNLLLDVSLPDGLQTSYRKRIPFQQEMKGKAEILTEDLRLIERIL HHCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH YQFKSIFEQV HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA