| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302420
Identifier: 146302420
GI number: 146302420
Start: 5672019
End: 5672447
Strand: Direct
Name: 146302420
Synonym: Fjoh_4693
Alternate gene names: NA
Gene position: 5672019-5672447 (Clockwise)
Preceding gene: 146302419
Following gene: 146302421
Centisome position: 93.03
GC content: 37.3
Gene sequence:
>429_bases ATGAACCCCTTTTTAAGAAATACTCTGGCCGTTACTGTCGGAATTATCATTGGAAGTTTAATAAACATGAGCATAATTTT AATCAGCAGTTCGATAATCCCTCTTCCGGAAGGAGCTGATAACAGAACAATACAAGGACTTCAAAAAACAATTCACTTAT TTGAGGCAAAACATTTTCTCTTTCCCTTTCTTGCCCATGCGGCAGGAACATTTGCCGGAGCCGTTACAACTGCATTACTT GCTGTAAATCATAAAAAGAAACTGGCTTTAGCCATTGGTGCTTTTTTCTTATTTGGCGGTATTATTAGTGTCAGCTCTCT CCCATCGCCAACCTGGTTTACACTTATCGATTTAGTTTTTGCTTATATACCAATGGCATACCTCGCGTTGAAATTAGTCT GCAGAAAACAATTGAAATTTGAATATTAA
Upstream 100 bases:
>100_bases ACGTTTCGCCTTTAGAGTTCAGGCAGTCTTTCAATTAAAAAATATTTTAAGTAAATGCAATTCATAATTTTCATAAATTC GTAAGAACAAAATAAAAATT
Downstream 100 bases:
>100_bases ATCCATAACATGAAAAACGAATCAACTAAACAAAAACCGGCAAAAATTTGTTACGAACATATTGGCGGAAAACTCGGGCA GTTACTTGCCGTTTCTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MNPFLRNTLAVTVGIIIGSLINMSIILISSSIIPLPEGADNRTIQGLQKTIHLFEAKHFLFPFLAHAAGTFAGAVTTALL AVNHKKKLALAIGAFFLFGGIISVSSLPSPTWFTLIDLVFAYIPMAYLALKLVCRKQLKFEY
Sequences:
>Translated_142_residues MNPFLRNTLAVTVGIIIGSLINMSIILISSSIIPLPEGADNRTIQGLQKTIHLFEAKHFLFPFLAHAAGTFAGAVTTALL AVNHKKKLALAIGAFFLFGGIISVSSLPSPTWFTLIDLVFAYIPMAYLALKLVCRKQLKFEY >Mature_142_residues MNPFLRNTLAVTVGIIIGSLINMSIILISSSIIPLPEGADNRTIQGLQKTIHLFEAKHFLFPFLAHAAGTFAGAVTTALL AVNHKKKLALAIGAFFLFGGIISVSSLPSPTWFTLIDLVFAYIPMAYLALKLVCRKQLKFEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15477; Mature: 15477
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPFLRNTLAVTVGIIIGSLINMSIILISSSIIPLPEGADNRTIQGLQKTIHLFEAKHFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FPFLAHAAGTFAGAVTTALLAVNHKKKLALAIGAFFLFGGIISVSSLPSPTWFTLIDLVF HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AYIPMAYLALKLVCRKQLKFEY HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNPFLRNTLAVTVGIIIGSLINMSIILISSSIIPLPEGADNRTIQGLQKTIHLFEAKHFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FPFLAHAAGTFAGAVTTALLAVNHKKKLALAIGAFFLFGGIISVSSLPSPTWFTLIDLVF HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AYIPMAYLALKLVCRKQLKFEY HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA