| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302412
Identifier: 146302412
GI number: 146302412
Start: 5666003
End: 5666401
Strand: Direct
Name: 146302412
Synonym: Fjoh_4685
Alternate gene names: NA
Gene position: 5666003-5666401 (Clockwise)
Preceding gene: 146302411
Following gene: 146302413
Centisome position: 92.93
GC content: 28.32
Gene sequence:
>399_bases ATGGCAAATTCTTTTTATTCCTATTCAGCTTATATATCACCGTCTTCAAATGCAGATATTAAGGTTTTAAAAGAGTTTCT AGATGCCTTTTATCAAGAATCTGATAATAAAATTACATTAAGCGACAATCAAATTACTATAACTTTTGATGATGAATATA ACTTCTATATTTATTTAGCAGAAGAAGAACATGTAAATCAAGAAGCACTCGAAATTGCCGGTTATTTAGAAGAAGACTGG AACGAAACCCCTTATGATAAAGAAAAATTAAAAGTATCAAAAAAGCGTTTTGAAGTTTGGGGAGATTCCGATTTTGATAT GGATTACTTCAATGACAGTCTTTTCATAATAGAGCAAGTGGAAAAGTTTAATGACATTATTATTTTTCAAAATCAATAA
Upstream 100 bases:
>100_bases ATATGAACATATCAAAGAAAATCCGGAAACTGTCGAAGAGCTTGTAAATAAATTAAAAGAAAACAATCCATTATTAATAA CCGATTTAAACCGAAAATAA
Downstream 100 bases:
>100_bases ACAGTATTTATAGAATATCAAAATCCGATTTGCAATAAAACAGATCGGATTTTTTATTTGCTATTAAAAAATTGTAATAT TTTACTTATTTATTAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MANSFYSYSAYISPSSNADIKVLKEFLDAFYQESDNKITLSDNQITITFDDEYNFYIYLAEEEHVNQEALEIAGYLEEDW NETPYDKEKLKVSKKRFEVWGDSDFDMDYFNDSLFIIEQVEKFNDIIIFQNQ
Sequences:
>Translated_132_residues MANSFYSYSAYISPSSNADIKVLKEFLDAFYQESDNKITLSDNQITITFDDEYNFYIYLAEEEHVNQEALEIAGYLEEDW NETPYDKEKLKVSKKRFEVWGDSDFDMDYFNDSLFIIEQVEKFNDIIIFQNQ >Mature_131_residues ANSFYSYSAYISPSSNADIKVLKEFLDAFYQESDNKITLSDNQITITFDDEYNFYIYLAEEEHVNQEALEIAGYLEEDWN ETPYDKEKLKVSKKRFEVWGDSDFDMDYFNDSLFIIEQVEKFNDIIIFQNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15735; Mature: 15604
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSFYSYSAYISPSSNADIKVLKEFLDAFYQESDNKITLSDNQITITFDDEYNFYIYLA CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEEEEEE EEEHVNQEALEIAGYLEEDWNETPYDKEKLKVSKKRFEVWGDSDFDMDYFNDSLFIIEQV CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEEH EKFNDIIIFQNQ HCCCCEEEEECC >Mature Secondary Structure ANSFYSYSAYISPSSNADIKVLKEFLDAFYQESDNKITLSDNQITITFDDEYNFYIYLA CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEEEEEE EEEHVNQEALEIAGYLEEDWNETPYDKEKLKVSKKRFEVWGDSDFDMDYFNDSLFIIEQV CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEEH EKFNDIIIFQNQ HCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA