| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302411
Identifier: 146302411
GI number: 146302411
Start: 5665358
End: 5666002
Strand: Direct
Name: 146302411
Synonym: Fjoh_4684
Alternate gene names: NA
Gene position: 5665358-5666002 (Clockwise)
Preceding gene: 146302410
Following gene: 146302412
Centisome position: 92.92
GC content: 35.81
Gene sequence:
>645_bases ATGACTTTAGAAGAATATAAAAAAGAATTTTCAGAAGACGACTCTGTTGGATGGTTAGAAATTGACAAAGTATTTGATCA GCTTTACCCAGAACAAGAACCCAAACATTTTGCACCGGCAATCAGCTATATGTTAGGCGGAGAAAGTCCGCTTGATGGTG TCAGTATTTACGAAAGTAAAAAGCAAGAAGATCATTTTCATTTTGTAACCTATGGCTTTTCAGAATTGTACTATAATGAA GAAAAAGTCAACGGAGAATTCAGTAAATGGGGATTTGAACTTACTTTCAGGCTTAAACCTTTTGAAGCCGATAACGGAAC CCCAAGCTGGGCGGTTGCACTTTTGCAGAATATTGCCAAATATGTTTTTAGTACAGGTAACTGGTTTGAAGAATTTCATT ATATGCCGGCAAATGGTCCTATAAGACTTGATACCGAAACCGATATTACTGCGCTGGTTTTTGTAAACGATCCCGAAATA GAAAAGATACAAACCCCTCACGGCGAAGTTTCTTTTCTGCAAATCGTTGGAATTACTTCTGCAGAATATGAACATATCAA AGAAAATCCGGAAACTGTCGAAGAGCTTGTAAATAAATTAAAAGAAAACAATCCATTATTAATAACCGATTTAAACCGAA AATAA
Upstream 100 bases:
>100_bases ACAAATAATGAATAAATTAAAAGTTTATTAATTAAAAGAAGTTTATTCTTAATATCAAAAGTTATATATTGTATCTCGTT AAAATCACAAAAAGAGATAT
Downstream 100 bases:
>100_bases ATGGCAAATTCTTTTTATTCCTATTCAGCTTATATATCACCGTCTTCAAATGCAGATATTAAGGTTTTAAAAGAGTTTCT AGATGCCTTTTATCAAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTLEEYKKEFSEDDSVGWLEIDKVFDQLYPEQEPKHFAPAISYMLGGESPLDGVSIYESKKQEDHFHFVTYGFSELYYNE EKVNGEFSKWGFELTFRLKPFEADNGTPSWAVALLQNIAKYVFSTGNWFEEFHYMPANGPIRLDTETDITALVFVNDPEI EKIQTPHGEVSFLQIVGITSAEYEHIKENPETVEELVNKLKENNPLLITDLNRK
Sequences:
>Translated_214_residues MTLEEYKKEFSEDDSVGWLEIDKVFDQLYPEQEPKHFAPAISYMLGGESPLDGVSIYESKKQEDHFHFVTYGFSELYYNE EKVNGEFSKWGFELTFRLKPFEADNGTPSWAVALLQNIAKYVFSTGNWFEEFHYMPANGPIRLDTETDITALVFVNDPEI EKIQTPHGEVSFLQIVGITSAEYEHIKENPETVEELVNKLKENNPLLITDLNRK >Mature_213_residues TLEEYKKEFSEDDSVGWLEIDKVFDQLYPEQEPKHFAPAISYMLGGESPLDGVSIYESKKQEDHFHFVTYGFSELYYNEE KVNGEFSKWGFELTFRLKPFEADNGTPSWAVALLQNIAKYVFSTGNWFEEFHYMPANGPIRLDTETDITALVFVNDPEIE KIQTPHGEVSFLQIVGITSAEYEHIKENPETVEELVNKLKENNPLLITDLNRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI296011020, Length=201, Percent_Identity=35.3233830845771, Blast_Score=118, Evalue=4e-27, Organism=Homo sapiens, GI19923479, Length=201, Percent_Identity=35.3233830845771, Blast_Score=118, Evalue=5e-27, Organism=Drosophila melanogaster, GI24646369, Length=211, Percent_Identity=30.8056872037915, Blast_Score=94, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24790; Mature: 24659
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLEEYKKEFSEDDSVGWLEIDKVFDQLYPEQEPKHFAPAISYMLGGESPLDGVSIYESK CCHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCC KQEDHFHFVTYGFSELYYNEEKVNGEFSKWGFELTFRLKPFEADNGTPSWAVALLQNIAK CCCCCEEEEEECHHHHHCCHHHCCCCHHCCCEEEEEEEECEECCCCCHHHHHHHHHHHHH YVFSTGNWFEEFHYMPANGPIRLDTETDITALVFVNDPEIEKIQTPHGEVSFLQIVGITS HHHCCCCHHHHCEECCCCCCEEEECCCCEEEEEEECCCCHHEECCCCCCEEEEEEEECCC AEYEHIKENPETVEELVNKLKENNPLLITDLNRK HHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCC >Mature Secondary Structure TLEEYKKEFSEDDSVGWLEIDKVFDQLYPEQEPKHFAPAISYMLGGESPLDGVSIYESK CHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCC KQEDHFHFVTYGFSELYYNEEKVNGEFSKWGFELTFRLKPFEADNGTPSWAVALLQNIAK CCCCCEEEEEECHHHHHCCHHHCCCCHHCCCEEEEEEEECEECCCCCHHHHHHHHHHHHH YVFSTGNWFEEFHYMPANGPIRLDTETDITALVFVNDPEIEKIQTPHGEVSFLQIVGITS HHHCCCCHHHHCEECCCCCCEEEECCCCEEEEEEECCCCHHEECCCCCCEEEEEEEECCC AEYEHIKENPETVEELVNKLKENNPLLITDLNRK HHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA