| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302402
Identifier: 146302402
GI number: 146302402
Start: 5657466
End: 5658050
Strand: Direct
Name: 146302402
Synonym: Fjoh_4675
Alternate gene names: NA
Gene position: 5657466-5658050 (Clockwise)
Preceding gene: 146302401
Following gene: 146302403
Centisome position: 92.79
GC content: 36.07
Gene sequence:
>585_bases ATGCCACATAATAGATTTTACCCTAACGAAGTATTCAAAGAAATAGAAATAAACGCCTCATTACAACTTAAATATGCCAT TTCAAACAGAGGAAGACTAATAAGCTTTACTGATGAAATTGAAAACGGCCGCATCCTTAAAGGCGGTTTGAGTGACGGAT ATCCAACTTTTAGATTTAAAGTCAAAAAAGACGACAAAATCATTAACAAATACTTATTTCTTTACAAATTAGTAGCCCAA TATTTTATTCCAAAAGATTCTGAAGATCAAACTTATGTTCTGCATCTGGATTATAACCGAAGCAACGATGATGTAAGCAA TTTACGCTGGGCAACAAAACAAGAAATGATGGCGCACAGCCGCAAGAGTCCGCGTGTAATTCAGGCCAAGAAAAACCTGA TAGAACACAATTTAAAAGCCGACGGAAGAAAACTGACTACAACAAAAGTCATGTTAATTAAAAAAATACTGGCAAGACCA GAACAAAAAACCCGTTTAAAAATGATCGCCAAACAATTTGGTGTAAGCGAAATGCAGATCCGCAGAATTGCCAGCGGTGA AAACTGGGGACACGTTAAAGTTTAA
Upstream 100 bases:
>100_bases TATAAGAATCATAAAATTGATAGTTCATTACCAGCACAATAGCATTCTTCATTTCGGAATTCTTTATCTTTGAGAGACAA AATTTAAATGAAAAAGAAAA
Downstream 100 bases:
>100_bases TGGCTAATTATAGAATTTAAATTAATAATTCGCCATCAGCAATTAAAACAATTATTATCACTCTATTAAAAAGTCGAAGA TCTTTGAATATTCAAAAAAA
Product: NUMOD4 domain-containing protein
Products: NA
Alternate protein names: NUMOD4 Domain-Containing Protein; Phage Related Endodeoxyribonuclease; Endonuclease
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MPHNRFYPNEVFKEIEINASLQLKYAISNRGRLISFTDEIENGRILKGGLSDGYPTFRFKVKKDDKIINKYLFLYKLVAQ YFIPKDSEDQTYVLHLDYNRSNDDVSNLRWATKQEMMAHSRKSPRVIQAKKNLIEHNLKADGRKLTTTKVMLIKKILARP EQKTRLKMIAKQFGVSEMQIRRIASGENWGHVKV
Sequences:
>Translated_194_residues MPHNRFYPNEVFKEIEINASLQLKYAISNRGRLISFTDEIENGRILKGGLSDGYPTFRFKVKKDDKIINKYLFLYKLVAQ YFIPKDSEDQTYVLHLDYNRSNDDVSNLRWATKQEMMAHSRKSPRVIQAKKNLIEHNLKADGRKLTTTKVMLIKKILARP EQKTRLKMIAKQFGVSEMQIRRIASGENWGHVKV >Mature_193_residues PHNRFYPNEVFKEIEINASLQLKYAISNRGRLISFTDEIENGRILKGGLSDGYPTFRFKVKKDDKIINKYLFLYKLVAQY FIPKDSEDQTYVLHLDYNRSNDDVSNLRWATKQEMMAHSRKSPRVIQAKKNLIEHNLKADGRKLTTTKVMLIKKILARPE QKTRLKMIAKQFGVSEMQIRRIASGENWGHVKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22746; Mature: 22615
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHNRFYPNEVFKEIEINASLQLKYAISNRGRLISFTDEIENGRILKGGLSDGYPTFRFK CCCCCCCHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCEEEECCCCCCCCEEEEE VKKDDKIINKYLFLYKLVAQYFIPKDSEDQTYVLHLDYNRSNDDVSNLRWATKQEMMAHS ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHC RKSPRVIQAKKNLIEHNLKADGRKLTTTKVMLIKKILARPEQKTRLKMIAKQFGVSEMQI CCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH RRIASGENWGHVKV HHHHCCCCCCCCCC >Mature Secondary Structure PHNRFYPNEVFKEIEINASLQLKYAISNRGRLISFTDEIENGRILKGGLSDGYPTFRFK CCCCCCHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCEEEECCCCCCCCEEEEE VKKDDKIINKYLFLYKLVAQYFIPKDSEDQTYVLHLDYNRSNDDVSNLRWATKQEMMAHS ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHC RKSPRVIQAKKNLIEHNLKADGRKLTTTKVMLIKKILARPEQKTRLKMIAKQFGVSEMQI CCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH RRIASGENWGHVKV HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA