Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146302400

Identifier: 146302400

GI number: 146302400

Start: 5655454

End: 5656143

Strand: Reverse

Name: 146302400

Synonym: Fjoh_4673

Alternate gene names: NA

Gene position: 5656143-5655454 (Counterclockwise)

Preceding gene: 146302433

Following gene: 146302393

Centisome position: 92.77

GC content: 29.28

Gene sequence:

>690_bases
ATGAAAAAATTTATGCTCTTTTTAGCCTTAACGCTATTTTTATCAATTACGTCTTGTGATTCTTCAAGTGATGATTTAGT
TGATGCCCAAAATGTTGAAAAGCTTAACAAACAAAAACAAATCTTAACTAAATTAGAGCAGCTAGGCATTGATTCTAAAA
ATGTAACATTTATAGATAATGTATCTACGGATGGAAGAATAGTAGTAGAATCTATTGATGATCTTGCTGAAATTTTCCCA
AAAGAATTAAATGATGAAGGCAAAATACAAGAAATGATTTCCAAGGAAAGTTCTGCACAAACTATTAAAAATCTTTCAAC
TGCTAAATCTTTCGATCTTTCGGAATACCAGAGGCTGTCATCAACAATTCCTGTTCCTAATTCATCAATGACAGTATATT
ATGAATTTTGGTATAATTCATTTTATATGAGTTATAACTGGAATGATGGGGTAAAGGATGTTAGTGTAGCAACTATTAAT
GGAAACGGTGTTTATTTTAGTTACAATGCTGTTAATTATTCAGCAAATGCTAGTTATACAGTAAATATTTATGGTAAGTT
TTATTATCCAATAATTATTGATGGACAAAACGCGAATATTGAACGACCAGCAAAAATAATTTGCTTTTTTAACCCTAATT
TAGAATATACGACATTCCCTTGGCAGCAATATATCTTCTTTACTAATTAA

Upstream 100 bases:

>100_bases
TCGGTGTGTTTTTGTATTACTTTAGTTACTTTTTTTGTTTTCATTTTAAGAAAAACGTTTGTATTATAATCCTTTGTAAC
TTTTAATTTTATATACCACT

Downstream 100 bases:

>100_bases
GTTGTAGTAAAAATTTTTCGTTTTAGGACGCGACAGACAATAATTAAAAAAAGGCCCAGTTTTGCAACTGGACCTTTTTC
AAAAAAAACAATAGGTAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKKFMLFLALTLFLSITSCDSSSDDLVDAQNVEKLNKQKQILTKLEQLGIDSKNVTFIDNVSTDGRIVVESIDDLAEIFP
KELNDEGKIQEMISKESSAQTIKNLSTAKSFDLSEYQRLSSTIPVPNSSMTVYYEFWYNSFYMSYNWNDGVKDVSVATIN
GNGVYFSYNAVNYSANASYTVNIYGKFYYPIIIDGQNANIERPAKIICFFNPNLEYTTFPWQQYIFFTN

Sequences:

>Translated_229_residues
MKKFMLFLALTLFLSITSCDSSSDDLVDAQNVEKLNKQKQILTKLEQLGIDSKNVTFIDNVSTDGRIVVESIDDLAEIFP
KELNDEGKIQEMISKESSAQTIKNLSTAKSFDLSEYQRLSSTIPVPNSSMTVYYEFWYNSFYMSYNWNDGVKDVSVATIN
GNGVYFSYNAVNYSANASYTVNIYGKFYYPIIIDGQNANIERPAKIICFFNPNLEYTTFPWQQYIFFTN
>Mature_229_residues
MKKFMLFLALTLFLSITSCDSSSDDLVDAQNVEKLNKQKQILTKLEQLGIDSKNVTFIDNVSTDGRIVVESIDDLAEIFP
KELNDEGKIQEMISKESSAQTIKNLSTAKSFDLSEYQRLSSTIPVPNSSMTVYYEFWYNSFYMSYNWNDGVKDVSVATIN
GNGVYFSYNAVNYSANASYTVNIYGKFYYPIIIDGQNANIERPAKIICFFNPNLEYTTFPWQQYIFFTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26209; Mature: 26209

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFMLFLALTLFLSITSCDSSSDDLVDAQNVEKLNKQKQILTKLEQLGIDSKNVTFIDN
CHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
VSTDGRIVVESIDDLAEIFPKELNDEGKIQEMISKESSAQTIKNLSTAKSFDLSEYQRLS
CCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH
STIPVPNSSMTVYYEFWYNSFYMSYNWNDGVKDVSVATINGNGVYFSYNAVNYSANASYT
CCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCEEEEEEEEEEECCCCEEE
VNIYGKFYYPIIIDGQNANIERPAKIICFFNPNLEYTTFPWQQYIFFTN
EEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEECCCEEEEEEEC
>Mature Secondary Structure
MKKFMLFLALTLFLSITSCDSSSDDLVDAQNVEKLNKQKQILTKLEQLGIDSKNVTFIDN
CHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
VSTDGRIVVESIDDLAEIFPKELNDEGKIQEMISKESSAQTIKNLSTAKSFDLSEYQRLS
CCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHH
STIPVPNSSMTVYYEFWYNSFYMSYNWNDGVKDVSVATINGNGVYFSYNAVNYSANASYT
CCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCEEEEEEEEEEECCCCEEE
VNIYGKFYYPIIIDGQNANIERPAKIICFFNPNLEYTTFPWQQYIFFTN
EEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA