| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302383
Identifier: 146302383
GI number: 146302383
Start: 5633189
End: 5633638
Strand: Reverse
Name: 146302383
Synonym: Fjoh_4656
Alternate gene names: NA
Gene position: 5633638-5633189 (Counterclockwise)
Preceding gene: 146302384
Following gene: 146302371
Centisome position: 92.4
GC content: 33.56
Gene sequence:
>450_bases ATGGCTTACGCAAATAATGATTTAACACGCTTTTTAGACGCACAGAACAAACTTTATCTTACGGCTTACTCCGAATTACA AAAAGGGAAAAAAGAAACGCACTGGATGTGGTTTATTTTTCCGCAGATAAAAGGTTTAGGAAAAAGTACGATTGCTAAAT ATTATGCTCTTGCAGATTTAAAAGAGGCAGAAGATTTTCTAAATCATCCTATTTTAGCCAAACATCTAATTGAAATTTGC AAGGTTTTATTAGAATATAAAACAAAATCTATTGAAGCAATTTTGGGTGAATTAAATGCACGAAAACTTCGTTCCTCAAT GACGCTTTTTTCTCAGACAGAAAATGCAGATCCTATTTTTCAGGAAATATTAGATGTGTTTTTCTTAGGGTTTTCAGACC CGCTTACTTTAGCAGGTATTGCAGAACCAGAAATTGCCATGGCATCTTAA
Upstream 100 bases:
>100_bases GTGTATTAATTATATAAATTTTAAATCAGGAACGTGAGTAGTTTTGAATGTCTTTAAAAAAGACCTGAAAATTTGTTTAA CCTTATAAAAATTATTTCAG
Downstream 100 bases:
>100_bases TTTTTTACAATTAAGAGTGCTCCGAAGTACAAAGCCCCAGCGGGGCGGTATATTTTGCAACCGATAGATATTTCGCAATT TATTTCTATAAATATTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: ADP-Ribose Pyrophosphatase With Conserved Domain; NUDIX Family Protein Hydrolase
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAYANNDLTRFLDAQNKLYLTAYSELQKGKKETHWMWFIFPQIKGLGKSTIAKYYALADLKEAEDFLNHPILAKHLIEIC KVLLEYKTKSIEAILGELNARKLRSSMTLFSQTENADPIFQEILDVFFLGFSDPLTLAGIAEPEIAMAS
Sequences:
>Translated_149_residues MAYANNDLTRFLDAQNKLYLTAYSELQKGKKETHWMWFIFPQIKGLGKSTIAKYYALADLKEAEDFLNHPILAKHLIEIC KVLLEYKTKSIEAILGELNARKLRSSMTLFSQTENADPIFQEILDVFFLGFSDPLTLAGIAEPEIAMAS >Mature_148_residues AYANNDLTRFLDAQNKLYLTAYSELQKGKKETHWMWFIFPQIKGLGKSTIAKYYALADLKEAEDFLNHPILAKHLIEICK VLLEYKTKSIEAILGELNARKLRSSMTLFSQTENADPIFQEILDVFFLGFSDPLTLAGIAEPEIAMAS
Specific function: Unknown
COG id: COG5579
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16952; Mature: 16821
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYANNDLTRFLDAQNKLYLTAYSELQKGKKETHWMWFIFPQIKGLGKSTIAKYYALADL CCCCCCHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHH KEAEDFLNHPILAKHLIEICKVLLEYKTKSIEAILGELNARKLRSSMTLFSQTENADPIF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QEILDVFFLGFSDPLTLAGIAEPEIAMAS HHHHHHHHHCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure AYANNDLTRFLDAQNKLYLTAYSELQKGKKETHWMWFIFPQIKGLGKSTIAKYYALADL CCCCCHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHH KEAEDFLNHPILAKHLIEICKVLLEYKTKSIEAILGELNARKLRSSMTLFSQTENADPIF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QEILDVFFLGFSDPLTLAGIAEPEIAMAS HHHHHHHHHCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA