Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146302383

Identifier: 146302383

GI number: 146302383

Start: 5633189

End: 5633638

Strand: Reverse

Name: 146302383

Synonym: Fjoh_4656

Alternate gene names: NA

Gene position: 5633638-5633189 (Counterclockwise)

Preceding gene: 146302384

Following gene: 146302371

Centisome position: 92.4

GC content: 33.56

Gene sequence:

>450_bases
ATGGCTTACGCAAATAATGATTTAACACGCTTTTTAGACGCACAGAACAAACTTTATCTTACGGCTTACTCCGAATTACA
AAAAGGGAAAAAAGAAACGCACTGGATGTGGTTTATTTTTCCGCAGATAAAAGGTTTAGGAAAAAGTACGATTGCTAAAT
ATTATGCTCTTGCAGATTTAAAAGAGGCAGAAGATTTTCTAAATCATCCTATTTTAGCCAAACATCTAATTGAAATTTGC
AAGGTTTTATTAGAATATAAAACAAAATCTATTGAAGCAATTTTGGGTGAATTAAATGCACGAAAACTTCGTTCCTCAAT
GACGCTTTTTTCTCAGACAGAAAATGCAGATCCTATTTTTCAGGAAATATTAGATGTGTTTTTCTTAGGGTTTTCAGACC
CGCTTACTTTAGCAGGTATTGCAGAACCAGAAATTGCCATGGCATCTTAA

Upstream 100 bases:

>100_bases
GTGTATTAATTATATAAATTTTAAATCAGGAACGTGAGTAGTTTTGAATGTCTTTAAAAAAGACCTGAAAATTTGTTTAA
CCTTATAAAAATTATTTCAG

Downstream 100 bases:

>100_bases
TTTTTTACAATTAAGAGTGCTCCGAAGTACAAAGCCCCAGCGGGGCGGTATATTTTGCAACCGATAGATATTTCGCAATT
TATTTCTATAAATATTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: ADP-Ribose Pyrophosphatase With Conserved Domain; NUDIX Family Protein Hydrolase

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAYANNDLTRFLDAQNKLYLTAYSELQKGKKETHWMWFIFPQIKGLGKSTIAKYYALADLKEAEDFLNHPILAKHLIEIC
KVLLEYKTKSIEAILGELNARKLRSSMTLFSQTENADPIFQEILDVFFLGFSDPLTLAGIAEPEIAMAS

Sequences:

>Translated_149_residues
MAYANNDLTRFLDAQNKLYLTAYSELQKGKKETHWMWFIFPQIKGLGKSTIAKYYALADLKEAEDFLNHPILAKHLIEIC
KVLLEYKTKSIEAILGELNARKLRSSMTLFSQTENADPIFQEILDVFFLGFSDPLTLAGIAEPEIAMAS
>Mature_148_residues
AYANNDLTRFLDAQNKLYLTAYSELQKGKKETHWMWFIFPQIKGLGKSTIAKYYALADLKEAEDFLNHPILAKHLIEICK
VLLEYKTKSIEAILGELNARKLRSSMTLFSQTENADPIFQEILDVFFLGFSDPLTLAGIAEPEIAMAS

Specific function: Unknown

COG id: COG5579

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16952; Mature: 16821

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYANNDLTRFLDAQNKLYLTAYSELQKGKKETHWMWFIFPQIKGLGKSTIAKYYALADL
CCCCCCHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHH
KEAEDFLNHPILAKHLIEICKVLLEYKTKSIEAILGELNARKLRSSMTLFSQTENADPIF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QEILDVFFLGFSDPLTLAGIAEPEIAMAS
HHHHHHHHHCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure 
AYANNDLTRFLDAQNKLYLTAYSELQKGKKETHWMWFIFPQIKGLGKSTIAKYYALADL
CCCCCHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHH
KEAEDFLNHPILAKHLIEICKVLLEYKTKSIEAILGELNARKLRSSMTLFSQTENADPIF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QEILDVFFLGFSDPLTLAGIAEPEIAMAS
HHHHHHHHHCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA