Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146302341

Identifier: 146302341

GI number: 146302341

Start: 5578520

End: 5579572

Strand: Direct

Name: 146302341

Synonym: Fjoh_4614

Alternate gene names: NA

Gene position: 5578520-5579572 (Clockwise)

Preceding gene: 146302340

Following gene: 146302343

Centisome position: 91.5

GC content: 33.33

Gene sequence:

>1053_bases
TTGGCAAAGTTTTCATTATCTAAAACAGATTTCAGAATAAACGATACAATTGTTCAACTTCCAGCTGCTATAGATGTTTT
AAAAAAAGCTTTGGGTGACTGCCGATATATCAAAAAACAATACAATCATATTTATACCTGGGACGATCTAGGCATTATGG
CTTTTTCTAAAGAAGGCAAACAAGCAGAAAGTCTAGCAATTGAATTTGAGGTTAAAAAATATGATTATTGCGCAAAAAGC
ATCTTTACCGGCGAATTTATATTTGATGGTCAAGAATTATTCCAATACTACGAAAACAACAAAAATCAGCTTGTAAAACT
CTTTAAAGGAGACAGAAGCGGCGCTTTTATCCTTAACGGAATCAGTATTTGGTTTGATAAAGAAGATGGCAAAATTACAA
GTCTCAGCATTTCTCCTTACGAAGAAAAAGAAAAGAAAATCTCAGCGCCTCTTGATCCTGAATTCAAAGCATTCAAACCT
TTATGGCAGGAATGGATTTCAGAAATAAATAAAATTGTTTCAAGCAGCAATGCCTATTACAATTTAACAGAAGGCATTTC
TACAGAAGATATTCAGGAACATATCGAACTTGAAGATGATATTAAAATACCGCCGGCCTTAATTAATTTTTACAAGGTTC
AAAATGTAGATTACGATCCTGTAACTGCTGCTTTTCAGTTTGGAATAAATAACTGGAGTTATGATTTAATTCCGTTTCAG
GACATTGCAGAAGAATGGAATTCGATACAAGATTTACAATTTGACGAAGACGATTTACCAGAACAGGAACTAGATTTCGA
AAAAATCAACACTAATAATTACACTAACCCAAAATGGATTCCGTTTGCTACAGGAAGAAATGGTGATTACTTATTGTACG
ATACAGATCCAGCTTCAAAAGGAAAATTCGGCCAAATCATCGAACTTCAAAACGAATCCTGGTCGCGCATCATTGTGGCA
GATTCATTAGAAGAATTAATCCAGAACGAAATCAACAATTTAAAAGCTGGTAAAAACGAGCATTTTGATTTTATTATTGG
TAAAGAAAATTAA

Upstream 100 bases:

>100_bases
TTTAGGAATTTACAATCCTGAACTAAAAAAACACACTCACAAACTGCGTGTTATCAAAAAAATCATATAAGCCTTTTCAT
TAACTCTAAAGTAATATACC

Downstream 100 bases:

>100_bases
AACACACAGATAAAACAGATTCGCTTTGCGAAAACTCGGATTTAAACGGATTTTTTGAAATAAATATGCAAAATCTACGA
GAGAAATTATTCAATTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MAKFSLSKTDFRINDTIVQLPAAIDVLKKALGDCRYIKKQYNHIYTWDDLGIMAFSKEGKQAESLAIEFEVKKYDYCAKS
IFTGEFIFDGQELFQYYENNKNQLVKLFKGDRSGAFILNGISIWFDKEDGKITSLSISPYEEKEKKISAPLDPEFKAFKP
LWQEWISEINKIVSSSNAYYNLTEGISTEDIQEHIELEDDIKIPPALINFYKVQNVDYDPVTAAFQFGINNWSYDLIPFQ
DIAEEWNSIQDLQFDEDDLPEQELDFEKINTNNYTNPKWIPFATGRNGDYLLYDTDPASKGKFGQIIELQNESWSRIIVA
DSLEELIQNEINNLKAGKNEHFDFIIGKEN

Sequences:

>Translated_350_residues
MAKFSLSKTDFRINDTIVQLPAAIDVLKKALGDCRYIKKQYNHIYTWDDLGIMAFSKEGKQAESLAIEFEVKKYDYCAKS
IFTGEFIFDGQELFQYYENNKNQLVKLFKGDRSGAFILNGISIWFDKEDGKITSLSISPYEEKEKKISAPLDPEFKAFKP
LWQEWISEINKIVSSSNAYYNLTEGISTEDIQEHIELEDDIKIPPALINFYKVQNVDYDPVTAAFQFGINNWSYDLIPFQ
DIAEEWNSIQDLQFDEDDLPEQELDFEKINTNNYTNPKWIPFATGRNGDYLLYDTDPASKGKFGQIIELQNESWSRIIVA
DSLEELIQNEINNLKAGKNEHFDFIIGKEN
>Mature_349_residues
AKFSLSKTDFRINDTIVQLPAAIDVLKKALGDCRYIKKQYNHIYTWDDLGIMAFSKEGKQAESLAIEFEVKKYDYCAKSI
FTGEFIFDGQELFQYYENNKNQLVKLFKGDRSGAFILNGISIWFDKEDGKITSLSISPYEEKEKKISAPLDPEFKAFKPL
WQEWISEINKIVSSSNAYYNLTEGISTEDIQEHIELEDDIKIPPALINFYKVQNVDYDPVTAAFQFGINNWSYDLIPFQD
IAEEWNSIQDLQFDEDDLPEQELDFEKINTNNYTNPKWIPFATGRNGDYLLYDTDPASKGKFGQIIELQNESWSRIIVAD
SLEELIQNEINNLKAGKNEHFDFIIGKEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40556; Mature: 40424

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKFSLSKTDFRINDTIVQLPAAIDVLKKALGDCRYIKKQYNHIYTWDDLGIMAFSKEGK
CCCCCCCCCCEEECCHHEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCC
QAESLAIEFEVKKYDYCAKSIFTGEFIFDGQELFQYYENNKNQLVKLFKGDRSGAFILNG
CCCEEEEEEEEHHHHHHHHHHCCCCEEECHHHHHHHHHCCHHHEEEEEECCCCCEEEEEE
ISIWFDKEDGKITSLSISPYEEKEKKISAPLDPEFKAFKPLWQEWISEINKIVSSSNAYY
EEEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
NLTEGISTEDIQEHIELEDDIKIPPALINFYKVQNVDYDPVTAAFQFGINNWSYDLIPFQ
EECCCCCHHHHHHHCCCCCCCCCCHHHHHEEEECCCCCCCHHHHEEECCCCCEEECCCHH
DIAEEWNSIQDLQFDEDDLPEQELDFEKINTNNYTNPKWIPFATGRNGDYLLYDTDPASK
HHHHHHCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCEEEEECCCCCCEEEEECCCCCC
GKFGQIIELQNESWSRIIVADSLEELIQNEINNLKAGKNEHFDFIIGKEN
CCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
AKFSLSKTDFRINDTIVQLPAAIDVLKKALGDCRYIKKQYNHIYTWDDLGIMAFSKEGK
CCCCCCCCCEEECCHHEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCC
QAESLAIEFEVKKYDYCAKSIFTGEFIFDGQELFQYYENNKNQLVKLFKGDRSGAFILNG
CCCEEEEEEEEHHHHHHHHHHCCCCEEECHHHHHHHHHCCHHHEEEEEECCCCCEEEEEE
ISIWFDKEDGKITSLSISPYEEKEKKISAPLDPEFKAFKPLWQEWISEINKIVSSSNAYY
EEEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
NLTEGISTEDIQEHIELEDDIKIPPALINFYKVQNVDYDPVTAAFQFGINNWSYDLIPFQ
EECCCCCHHHHHHHCCCCCCCCCCHHHHHEEEECCCCCCCHHHHEEECCCCCEEECCCHH
DIAEEWNSIQDLQFDEDDLPEQELDFEKINTNNYTNPKWIPFATGRNGDYLLYDTDPASK
HHHHHHCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCEEEEECCCCCCEEEEECCCCCC
GKFGQIIELQNESWSRIIVADSLEELIQNEINNLKAGKNEHFDFIIGKEN
CCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA