Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is yheT [H]

Identifier: 146302338

GI number: 146302338

Start: 5574882

End: 5575865

Strand: Reverse

Name: yheT [H]

Synonym: Fjoh_4611

Alternate gene names: 146302338

Gene position: 5575865-5574882 (Counterclockwise)

Preceding gene: 146302342

Following gene: 146302337

Centisome position: 91.45

GC content: 35.06

Gene sequence:

>984_bases
ATGCCGCTAATCGAACAGTCAGAATATACTTTCCCTTCTATTATTCATCGCAACAGGCATGTCTCAACTATTTATGCCGC
TTTGTTTAAAAAATTTGAAGTTCCGGAATATACAAGAGAGAAACATGAACTCAATGATGGAGATTTTATCAACATTGATT
TTGTTTTAAACGATTCGAAAAAAGCAGTTATTTTATGTCATGGTCTAGAAGGAGATTCCCGTAGAACTTATAATAACAGC
TGCGCAGCTTATTTTCTACAGAAAGAGTTTTCTGTTTTTGCCTGGAACAACCGCACTTGTGGAGGAGAAATGAACCGCCT
GCCAAGACTTTATCATCATGGTGCAGTTGATGATTTAGACGAAGTGGTTCAGTTTGTTTTGAGAAAAGGTTTTGATGATG
TTTATTTGATTGGTTATTCAATGGGAGGTGTTCAGCTTTTAAATTATTTTGGCTGGACTAAAATTGATAAGCGTATAAAA
GCAGGAGTTTCTATTTCTGTGCCTACACATATTGCAACAAGTGCTGCAGTACTCAAACAAGGTTTTAACAGGGTATATTT
AAAGAATTTTACGATTGATATAAAAAGAAAACTAAAATATAAAGCAGCTCAGTTTCCGGATTTTATAAATCGAGATCAAA
TTGACAAAATTTCATCTTTTGACGAAGTTGATCATTACTTTACAGCACCTCTGCATGGTTTTGCAAGTCGTGAGGATTAC
TACCAGCGTGTTTCTCCCGAATTTTCTCTTAAAAACATTACCACTCCGGTTTTAATTATTAATTCTCTTGATGATCCTTT
TTTAGGCGAAAGATGTTATCCAAGGGCTATTGCACAAGACAGTGAATATGTTTATCTTGAAACTCCAAAATATGGCGGAC
ATTGTGCTTTTCCGCTTCGTGATTCTATGTATTCTTATGCAGAGAAAAGAGCCTATGACTTTTTTGAATCTCGTGAAAAA
AATGCTCAGATTATCAAAGCTTAG

Upstream 100 bases:

>100_bases
GAGTGGCTTTTTTGTTTTTAAAAAGAAATAAAAAGACAGTTTTAAATTACATATTGATTGATTTATTAGATTTGTAGTGC
GCACCGTAAAACTTTTTGTT

Downstream 100 bases:

>100_bases
CAATAATTATTTCAACTGTTTTTTAAACAGCAGTTTTTTAATATATAATTATTAAAGTATAGCAGTAATAGATAAATTTT
GCAGAAGTTTTATCTAAATA

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MPLIEQSEYTFPSIIHRNRHVSTIYAALFKKFEVPEYTREKHELNDGDFINIDFVLNDSKKAVILCHGLEGDSRRTYNNS
CAAYFLQKEFSVFAWNNRTCGGEMNRLPRLYHHGAVDDLDEVVQFVLRKGFDDVYLIGYSMGGVQLLNYFGWTKIDKRIK
AGVSISVPTHIATSAAVLKQGFNRVYLKNFTIDIKRKLKYKAAQFPDFINRDQIDKISSFDEVDHYFTAPLHGFASREDY
YQRVSPEFSLKNITTPVLIINSLDDPFLGERCYPRAIAQDSEYVYLETPKYGGHCAFPLRDSMYSYAEKRAYDFFESREK
NAQIIKA

Sequences:

>Translated_327_residues
MPLIEQSEYTFPSIIHRNRHVSTIYAALFKKFEVPEYTREKHELNDGDFINIDFVLNDSKKAVILCHGLEGDSRRTYNNS
CAAYFLQKEFSVFAWNNRTCGGEMNRLPRLYHHGAVDDLDEVVQFVLRKGFDDVYLIGYSMGGVQLLNYFGWTKIDKRIK
AGVSISVPTHIATSAAVLKQGFNRVYLKNFTIDIKRKLKYKAAQFPDFINRDQIDKISSFDEVDHYFTAPLHGFASREDY
YQRVSPEFSLKNITTPVLIINSLDDPFLGERCYPRAIAQDSEYVYLETPKYGGHCAFPLRDSMYSYAEKRAYDFFESREK
NAQIIKA
>Mature_326_residues
PLIEQSEYTFPSIIHRNRHVSTIYAALFKKFEVPEYTREKHELNDGDFINIDFVLNDSKKAVILCHGLEGDSRRTYNNSC
AAYFLQKEFSVFAWNNRTCGGEMNRLPRLYHHGAVDDLDEVVQFVLRKGFDDVYLIGYSMGGVQLLNYFGWTKIDKRIKA
GVSISVPTHIATSAAVLKQGFNRVYLKNFTIDIKRKLKYKAAQFPDFINRDQIDKISSFDEVDHYFTAPLHGFASREDYY
QRVSPEFSLKNITTPVLIINSLDDPFLGERCYPRAIAQDSEYVYLETPKYGGHCAFPLRDSMYSYAEKRAYDFFESREKN
AQIIKA

Specific function: Unknown

COG id: COG0429

COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]

Homologues:

Organism=Homo sapiens, GI23397663, Length=273, Percent_Identity=27.8388278388278, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI194578891, Length=302, Percent_Identity=22.1854304635762, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI23397659, Length=324, Percent_Identity=20.9876543209877, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI23397661, Length=324, Percent_Identity=20.9876543209877, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1789752, Length=287, Percent_Identity=28.9198606271777, Blast_Score=127, Evalue=9e-31,
Organism=Caenorhabditis elegans, GI71985405, Length=289, Percent_Identity=25.9515570934256, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17566110, Length=289, Percent_Identity=25.6055363321799, Blast_Score=85, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6323866, Length=263, Percent_Identity=27.7566539923954, Blast_Score=91, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6325162, Length=286, Percent_Identity=26.2237762237762, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6319655, Length=278, Percent_Identity=25.5395683453237, Blast_Score=73, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24652003, Length=302, Percent_Identity=28.476821192053, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI281398151, Length=302, Percent_Identity=28.476821192053, Blast_Score=108, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012020
- InterPro:   IPR000073
- InterPro:   IPR000952 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 37906; Mature: 37775

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS00120 LIPASE_SER ; PS01133 UPF0017

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLIEQSEYTFPSIIHRNRHVSTIYAALFKKFEVPEYTREKHELNDGDFINIDFVLNDSK
CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEECCC
KAVILCHGLEGDSRRTYNNSCAAYFLQKEFSVFAWNNRTCGGEMNRLPRLYHHGAVDDLD
CEEEEEECCCCCCCCCCCCCHHHEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHH
EVVQFVLRKGFDDVYLIGYSMGGVQLLNYFGWTKIDKRIKAGVSISVPTHIATSAAVLKQ
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHCHHHHHHHHHCCEEEECCHHHHHHHHHHHH
GFNRVYLKNFTIDIKRKLKYKAAQFPDFINRDQIDKISSFDEVDHYFTAPLHGFASREDY
CCCEEEEEEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHCCCCHHCCCCHHHH
YQRVSPEFSLKNITTPVLIINSLDDPFLGERCYPRAIAQDSEYVYLETPKYGGHCAFPLR
HHHCCCCCCHHCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCEECCCHH
DSMYSYAEKRAYDFFESREKNAQIIKA
HHHHHHHHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure 
PLIEQSEYTFPSIIHRNRHVSTIYAALFKKFEVPEYTREKHELNDGDFINIDFVLNDSK
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEECCC
KAVILCHGLEGDSRRTYNNSCAAYFLQKEFSVFAWNNRTCGGEMNRLPRLYHHGAVDDLD
CEEEEEECCCCCCCCCCCCCHHHEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHH
EVVQFVLRKGFDDVYLIGYSMGGVQLLNYFGWTKIDKRIKAGVSISVPTHIATSAAVLKQ
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHCHHHHHHHHHCCEEEECCHHHHHHHHHHHH
GFNRVYLKNFTIDIKRKLKYKAAQFPDFINRDQIDKISSFDEVDHYFTAPLHGFASREDY
CCCEEEEEEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHCCCCHHCCCCHHHH
YQRVSPEFSLKNITTPVLIINSLDDPFLGERCYPRAIAQDSEYVYLETPKYGGHCAFPLR
HHHCCCCCCHHCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCEECCCHH
DSMYSYAEKRAYDFFESREKNAQIIKA
HHHHHHHHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]