| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302335
Identifier: 146302335
GI number: 146302335
Start: 5572224
End: 5573000
Strand: Direct
Name: 146302335
Synonym: Fjoh_4608
Alternate gene names: NA
Gene position: 5572224-5573000 (Clockwise)
Preceding gene: 146302333
Following gene: 146302336
Centisome position: 91.39
GC content: 33.46
Gene sequence:
>777_bases ATGAAAAAATCAATTACGGCAATTGCATTATTTATCATAAGTTTTTTTCTTCACGAAAATTGTTTCAGTCAGGCATCGAA AAAAACAAAATTTAAAGTTTTAGTTTTATATGAAAACGGCGGACATCATCTGGCTTTTTCTAAAGCAGCAAAACCCTGGT TGAACAAACTGGCGGCCGAAAACAATTTTACAATAGATTATATTGAAAATACAAAGACAATTAATGAATCTCTTTTAAAC CAATACCGTCTTTTTATACAACTCGATTATCCGCCTTACACATGGAGTGAAGAATCTATGAAAGCTTTTCAAAAATATAT GAATGACGGCAAAGGAGGCTGGATAGGTCTGCATCATGCAACTTTATTAGGAGAATTTGATGGTTATCCTATCTGGAATT GGTTCTCTGATTTAATGGGCGGTATTAGATTCGTTAACTATATACCTGATTTTGCCAGTGCAAAAGTTATTGTTGAAGAT AAAGTGCATCCTGTAATGAAAGGAGTTCCCGCTGATTTTCTGGTACAAAAAGAAGAATGGTACACTTATGACAAAAGTCC GCGCAAAATTGTTCACGTTTTAGCTTCTGTAGATGAGTCGACTTATCAGCCGGATTCAAAAATAAAAATGGGAGATCACC CTGTTGTTTGGACAAATGAGCATTTTACATCCCGAAATGTTTATATTTTTATGGGACATTCTCCCAATTTATTTGATAAT AAAGCCTACACTGCTCTTTTTAAAAATGCAATTTTATGGGCTTCAAATAAAAAATAA
Upstream 100 bases:
>100_bases CTGTACTTAATACTACTTTATTAAGACACTATATTAATGATTGAAAAGTGAAAAGCATATTGTAAATTTGAAATTAAACA TTCATCTTTTGGGCAGCGAA
Downstream 100 bases:
>100_bases GTTCGCCGTTTTATCTATTTTCAGAATATCTATTTATTCATGAAACCTTATATTCGCAGAGAATTTAAACAAACAAAAAA GAAAAATGATCCAAAAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Glycosyl Hydrolase; PKD Domain Containing Protein; Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Sigma-70 Factor; Cytochrome C Class I; Crp/Fnr Family Transcriptional Regulator; YVTN Beta-Propeller Repeat-Containing Protein; Glucose/Sorbosone Dehydrogenase; LOW QUALITY PROTEIN Sigma-70 Factor; Endo-1 4-Beta-Xylanase A; Low Quality Protein; 40-Residue YVTN Beta-Propeller Repeat-Containing Protein; Glycoside Hydrolase Family; Pkd Domain Containing Protein; 40-Residue YVTN Beta-Propeller Repeat Protein
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKKSITAIALFIISFFLHENCFSQASKKTKFKVLVLYENGGHHLAFSKAAKPWLNKLAAENNFTIDYIENTKTINESLLN QYRLFIQLDYPPYTWSEESMKAFQKYMNDGKGGWIGLHHATLLGEFDGYPIWNWFSDLMGGIRFVNYIPDFASAKVIVED KVHPVMKGVPADFLVQKEEWYTYDKSPRKIVHVLASVDESTYQPDSKIKMGDHPVVWTNEHFTSRNVYIFMGHSPNLFDN KAYTALFKNAILWASNKK
Sequences:
>Translated_258_residues MKKSITAIALFIISFFLHENCFSQASKKTKFKVLVLYENGGHHLAFSKAAKPWLNKLAAENNFTIDYIENTKTINESLLN QYRLFIQLDYPPYTWSEESMKAFQKYMNDGKGGWIGLHHATLLGEFDGYPIWNWFSDLMGGIRFVNYIPDFASAKVIVED KVHPVMKGVPADFLVQKEEWYTYDKSPRKIVHVLASVDESTYQPDSKIKMGDHPVVWTNEHFTSRNVYIFMGHSPNLFDN KAYTALFKNAILWASNKK >Mature_258_residues MKKSITAIALFIISFFLHENCFSQASKKTKFKVLVLYENGGHHLAFSKAAKPWLNKLAAENNFTIDYIENTKTINESLLN QYRLFIQLDYPPYTWSEESMKAFQKYMNDGKGGWIGLHHATLLGEFDGYPIWNWFSDLMGGIRFVNYIPDFASAKVIVED KVHPVMKGVPADFLVQKEEWYTYDKSPRKIVHVLASVDESTYQPDSKIKMGDHPVVWTNEHFTSRNVYIFMGHSPNLFDN KAYTALFKNAILWASNKK
Specific function: Unknown
COG id: COG3828
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29840; Mature: 29840
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSITAIALFIISFFLHENCFSQASKKTKFKVLVLYENGGHHLAFSKAAKPWLNKLAAE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHHCC NNFTIDYIENTKTINESLLNQYRLFIQLDYPPYTWSEESMKAFQKYMNDGKGGWIGLHHA CCCEEEEECCCHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHH TLLGEFDGYPIWNWFSDLMGGIRFVNYIPDFASAKVIVEDKVHPVMKGVPADFLVQKEEW EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCCHHHEEEHHHH YTYDKSPRKIVHVLASVDESTYQPDSKIKMGDHPVVWTNEHFTSRNVYIFMGHSPNLFDN EECCCCHHHHHHHHHHCCHHCCCCCCCEEECCCCEEECCCCCCCCCEEEEECCCCCCCCC KAYTALFKNAILWASNKK HHHHHHHHHHEEEECCCC >Mature Secondary Structure MKKSITAIALFIISFFLHENCFSQASKKTKFKVLVLYENGGHHLAFSKAAKPWLNKLAAE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHHCC NNFTIDYIENTKTINESLLNQYRLFIQLDYPPYTWSEESMKAFQKYMNDGKGGWIGLHHA CCCEEEEECCCHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHH TLLGEFDGYPIWNWFSDLMGGIRFVNYIPDFASAKVIVEDKVHPVMKGVPADFLVQKEEW EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCCHHHEEEHHHH YTYDKSPRKIVHVLASVDESTYQPDSKIKMGDHPVVWTNEHFTSRNVYIFMGHSPNLFDN EECCCCHHHHHHHHHHCCHHCCCCCCCEEECCCCEEECCCCCCCCCEEEEECCCCCCCCC KAYTALFKNAILWASNKK HHHHHHHHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA