Click here to switch to the map view.

The map label for this gene is cpsA1 [H]

Identifier: 146302330

GI number: 146302330

Start: 5566678

End: 5567961

Strand: Direct

Name: cpsA1 [H]

Synonym: Fjoh_4603

Alternate gene names: 146302330

Gene position: 5566678-5567961 (Clockwise)

Preceding gene: 146302329

Following gene: 146302332

Centisome position: 91.3

GC content: 33.64

Gene sequence:

>1284_bases
ATGAAACAAATCCTATTGGCATTACTTATTCTGATATTTTCTACACAGCAAATTCTTTACGGGCAAAAAGCAAAAAGCAA
CATTAATATTCAGGAATCGATTAAGCTTGAAACTGATAAAATCTTTGACAAACTTGTTCAGATTAGAAGAGATTTTCATG
AAAACCCTGAACTGGCCGGCAAAGAAAAAAGAACTCAGGAAGTTGTCAAACAACATTTACTGGATTTAGGTCTTCAAGTC
GAAACTGATATTTACGGCTACGGACTTTTAGGTATTTTAAAAGGTGATAAAAAGGGAAAAAATATAGCATGGAGAACTGA
TATGGATGCTCTGCCAAACGATTTTCCTGATAAATCTGATTTTAAATCTAAAGTAAAAGGTGTTCAGCATGGCTGTGGAC
ATGACGTACACTTGGCAGTTGCATTAGGGATTGCAGAAGTTTTAGCAAAACACAAAAAATCACTTCAAGGCACGGTTTAT
TTTATTTTTCAGCCCGAAGAAGAAACCTTTAAAGGAGCAAAAGCGATTGTTGAAAATAAAAAATTCGCACAATTTAAACT
CGATGAAATTTATGCCCTTCATGTAACAGCTTTGCCTGCCGGACAGATAATGGTAAAACCAAATGAAATGTATGCCTACC
AAAAAGAAATAGGAATACAGTTTAAAAATGTATTATCAAAGGAGGAAGTAAAAGATCTGTCTGCCAAAATCCGTAAATCA
TTAGTCAGAACTATTAATGGCAGTAAACCGTGGGAAATTCAATCTATTTTAGATCCTAAAATTGGATTAAGAAATCCAAA
CACCATATTCAAAGATTACTTAATTGCCGATGAAAATTTTAGAAGTTATTCTAAAAACGACACATTCCGTATAAATGCAG
AAATCTATGAAACCGATGCTTCCAGAGTAAAAAATATTATTCCTGCTGTTGAACAGGTAATTAAAGACAATAATTTTGGT
TCGCAGCTGCTTTCTGTTTCGTTTATAAAAGAAAATCCAACCGTTTTAAACCATCCAGATTTAACACGCAATTCTGTAAA
TACACTGGAGAATATTTACGGAAAAGGATTTGTCACTGCTGACTACGGACAAATTCCTTATTTTAATGATGACTTCGCTT
ATTTTCAGCAAAAAGTCCCAGGAGTGTATTTCCTTCTTGGAGGTTCTAATTTTGAAAAAGGAAATATAGCCATGAATCAC
GCTCCCAATTTTGAAGTTGATGAAGAATGCATTAGAAGCGGAGTTAAAACATTTTCTTCGTTACTGTTTCAAAGAGGTAA
ATAA

Upstream 100 bases:

>100_bases
CAATGACAGCTTTGTAAAAATTCCAGTTTTGAAATAGTTCTCTTTTCAGCTAAAAACATATTCTCTAAATAAATTAACTC
CCATTTTAACAAACCATAAA

Downstream 100 bases:

>100_bases
AACTTAGAATATTAAAATATAAAAAAAGCGGTTTCAAATGAAATCGCTTTTTTATGTTGTGACCATGGAGGGATTCGAAC
CTTAAATCTCACCCGTCATT

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MKQILLALLILIFSTQQILYGQKAKSNINIQESIKLETDKIFDKLVQIRRDFHENPELAGKEKRTQEVVKQHLLDLGLQV
ETDIYGYGLLGILKGDKKGKNIAWRTDMDALPNDFPDKSDFKSKVKGVQHGCGHDVHLAVALGIAEVLAKHKKSLQGTVY
FIFQPEEETFKGAKAIVENKKFAQFKLDEIYALHVTALPAGQIMVKPNEMYAYQKEIGIQFKNVLSKEEVKDLSAKIRKS
LVRTINGSKPWEIQSILDPKIGLRNPNTIFKDYLIADENFRSYSKNDTFRINAEIYETDASRVKNIIPAVEQVIKDNNFG
SQLLSVSFIKENPTVLNHPDLTRNSVNTLENIYGKGFVTADYGQIPYFNDDFAYFQQKVPGVYFLLGGSNFEKGNIAMNH
APNFEVDEECIRSGVKTFSSLLFQRGK

Sequences:

>Translated_427_residues
MKQILLALLILIFSTQQILYGQKAKSNINIQESIKLETDKIFDKLVQIRRDFHENPELAGKEKRTQEVVKQHLLDLGLQV
ETDIYGYGLLGILKGDKKGKNIAWRTDMDALPNDFPDKSDFKSKVKGVQHGCGHDVHLAVALGIAEVLAKHKKSLQGTVY
FIFQPEEETFKGAKAIVENKKFAQFKLDEIYALHVTALPAGQIMVKPNEMYAYQKEIGIQFKNVLSKEEVKDLSAKIRKS
LVRTINGSKPWEIQSILDPKIGLRNPNTIFKDYLIADENFRSYSKNDTFRINAEIYETDASRVKNIIPAVEQVIKDNNFG
SQLLSVSFIKENPTVLNHPDLTRNSVNTLENIYGKGFVTADYGQIPYFNDDFAYFQQKVPGVYFLLGGSNFEKGNIAMNH
APNFEVDEECIRSGVKTFSSLLFQRGK
>Mature_427_residues
MKQILLALLILIFSTQQILYGQKAKSNINIQESIKLETDKIFDKLVQIRRDFHENPELAGKEKRTQEVVKQHLLDLGLQV
ETDIYGYGLLGILKGDKKGKNIAWRTDMDALPNDFPDKSDFKSKVKGVQHGCGHDVHLAVALGIAEVLAKHKKSLQGTVY
FIFQPEEETFKGAKAIVENKKFAQFKLDEIYALHVTALPAGQIMVKPNEMYAYQKEIGIQFKNVLSKEEVKDLSAKIRKS
LVRTINGSKPWEIQSILDPKIGLRNPNTIFKDYLIADENFRSYSKNDTFRINAEIYETDASRVKNIIPAVEQVIKDNNFG
SQLLSVSFIKENPTVLNHPDLTRNSVNTLENIYGKGFVTADYGQIPYFNDDFAYFQQKVPGVYFLLGGSNFEKGNIAMNH
APNFEVDEECIRSGVKTFSSLLFQRGK

Specific function: Can release basic, acidic, aromatic, and, to a lesser extent, aliphatic amino acids [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=231, Percent_Identity=27.7056277056277, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 48434; Mature: 48434

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQILLALLILIFSTQQILYGQKAKSNINIQESIKLETDKIFDKLVQIRRDFHENPELAG
CHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
KEKRTQEVVKQHLLDLGLQVETDIYGYGLLGILKGDKKGKNIAWRTDMDALPNDFPDKSD
CHHHHHHHHHHHHHHCCCEEECCEECCEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHH
FKSKVKGVQHGCGHDVHLAVALGIAEVLAKHKKSLQGTVYFIFQPEEETFKGAKAIVENK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCC
KFAQFKLDEIYALHVTALPAGQIMVKPNEMYAYQKEIGIQFKNVLSKEEVKDLSAKIRKS
HHHHEECCCEEEEEEEECCCCCEEECCHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHH
LVRTINGSKPWEIQSILDPKIGLRNPNTIFKDYLIADENFRSYSKNDTFRINAEIYETDA
HHHHHCCCCCEEHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCH
SRVKNIIPAVEQVIKDNNFGSQLLSVSFIKENPTVLNHPDLTRNSVNTLENIYGKGFVTA
HHHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE
DYGQIPYFNDDFAYFQQKVPGVYFLLGGSNFEKGNIAMNHAPNFEVDEECIRSGVKTFSS
CCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHH
LLFQRGK
HHHHCCC
>Mature Secondary Structure
MKQILLALLILIFSTQQILYGQKAKSNINIQESIKLETDKIFDKLVQIRRDFHENPELAG
CHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
KEKRTQEVVKQHLLDLGLQVETDIYGYGLLGILKGDKKGKNIAWRTDMDALPNDFPDKSD
CHHHHHHHHHHHHHHCCCEEECCEECCEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHH
FKSKVKGVQHGCGHDVHLAVALGIAEVLAKHKKSLQGTVYFIFQPEEETFKGAKAIVENK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCC
KFAQFKLDEIYALHVTALPAGQIMVKPNEMYAYQKEIGIQFKNVLSKEEVKDLSAKIRKS
HHHHEECCCEEEEEEEECCCCCEEECCHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHH
LVRTINGSKPWEIQSILDPKIGLRNPNTIFKDYLIADENFRSYSKNDTFRINAEIYETDA
HHHHHCCCCCEEHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCH
SRVKNIIPAVEQVIKDNNFGSQLLSVSFIKENPTVLNHPDLTRNSVNTLENIYGKGFVTA
HHHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE
DYGQIPYFNDDFAYFQQKVPGVYFLLGGSNFEKGNIAMNHAPNFEVDEECIRSGVKTFSS
CCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHH
LLFQRGK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559343; 11427726; 1597179 [H]