| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is cocE [H]
Identifier: 146302329
GI number: 146302329
Start: 5564866
End: 5566614
Strand: Direct
Name: cocE [H]
Synonym: Fjoh_4602
Alternate gene names: 146302329
Gene position: 5564866-5566614 (Clockwise)
Preceding gene: 146302327
Following gene: 146302330
Centisome position: 91.27
GC content: 34.88
Gene sequence:
>1749_bases ATGATTCATAAAGTAACATTATTATTTCTGAGTTTATTTTTCATGGTAATTTCTGTATCTGCACAGCAGACTAAAGCAGC AAAACTGGCAGATCAGGAAAACGCTTATGATATTCAGGACAGCATATCTATCAAAACGCGTGACGGAGCAATATTATCTG CCATGATTGCCCGCAAAAAGAACGATAATGAACCGCAGCCTGTAATTCTCCAATATACAATTTATGTTAGAGATAAAGGC AGAGACCTAAAATCGATCAAAGAATCTGTAGATAAAGGCTATATCGGGATTATAGTTTATTCGAGAGGAAAACGTTTCAG CCCAGACGAGATTAATCCGTATGAAGATGAAGCTAATGATGTTTACGACGCCATAGACTGGATCAGCAAACAAAAATGGT GCAATGGAAAAACGGCTATGTATGGCGGCAGTTATAACGGATTTACGCAATGGGCTGCCTGCAAAAAAATGCATCCGGCA CTTAAAACAATTGTTCCTTCTGTTGCAAACAGACCCGGAATGGGACTGCCAATGGAAAACAATGTTTTTATAAATCCAAA TTACGAATGGGCGTTTTATGTAGGAAACAATAAATATCTGGATACAGTAACGAATAATAACAGACCTCGTTTTAGAGCTT TAAAATTTAGATGGTGGGAATCTGGAACAGCGTACAAAAAACTAGACAGTATAGACGGCGAACCAAACAGATGGTTTCAA AAATGGATAAGCCATCCTTCATTTGACTCTTACTGGCAGAAAATGGCGCCTTATAAAACTGATTTTTCACAGATTAATAT TCCTGTTTTAGCATTTGACGGTTATTATAACGATTCTCAAAATTCAAGTTTGTATTATTTAAAAGAACTTCAAAAATACA GCCCGAAAACCCCTTTTTATCTGGTAATTGGACCTTACGGACATTTTGGAACTCAAATTGGCGGTGAAGCTGTTTTAAAC GATTACAAAGTCGATCCTGTTTCTTTGTTTGATATCAAAAAAATCACTTACGAATGGTTTGATTATATTTTGAAAAACGG CGCTAAACCAGAAATTTTAAAAGATAAAATTAATTATGAAGTCATGGGAGCAAATGAATGGAAAAGCGCTCCTTCATTTG AAAAAATGCATAACAACTATCTAACCTTTTATTTGACTTCTGCCGTTTCACAAGATTTTCGTCTCGCAGATACTAAGAAG CCCAAAAAGAAAGAATTCTTAACACAAGAAGTTGATTTTGCTAACAGAGAAATCAGCAATAACAATTATTATCCTAGTCC GATTATTCAAAAAGAAGTCAACAAAAATGACGGTTATTTTTTTATAAGTGAGCCTCTAACTGAACCTTTAATTGTAAACG GTTCTTTTTTGGGAGAAATTAAACTGAGCATCAATAAAAAAGATTTGGATTTGGGCGTAACCCTGTATGAAGTAACTCCA AACGGAGAATATTTTCATCTCTCCTACTACATTGGACGCGTCAGTTATGCAAAAGATATTGAAAAAAGACAGCTTTTAGA ACCTAATAAAATAGAAACAATTGCTTTTTCTAATACGCATTTTGTAAGCCGGCAGCTGAGCAAAGGAAGCCGATTATTGA TTGCATTAAATGTTAATAAAAATCCTTTTTCGCAATTGAATTACGGAACAGGAAAAGAGGTCAGCGATGAAACAATTCTC GATGCCAAAGAGCCTTTAAAAATTAAATGGTACAATGACAGCTTTGTAAAAATTCCAGTTTTGAAATAG
Upstream 100 bases:
>100_bases ATTCTAAAAAAATGTAACATATAGTTATAATTTACGTCTATCATAAAAAGTAAATATAGAAATAATAATTAAATTCGTTT AACCCAAAAACTTAGTAATT
Downstream 100 bases:
>100_bases TTCTCTTTTCAGCTAAAAACATATTCTCTAAATAAATTAACTCCCATTTTAACAAACCATAAAATGAAACAAATCCTATT GGCATTACTTATTCTGATAT
Product: peptidase S15
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 582; Mature: 582
Protein sequence:
>582_residues MIHKVTLLFLSLFFMVISVSAQQTKAAKLADQENAYDIQDSISIKTRDGAILSAMIARKKNDNEPQPVILQYTIYVRDKG RDLKSIKESVDKGYIGIIVYSRGKRFSPDEINPYEDEANDVYDAIDWISKQKWCNGKTAMYGGSYNGFTQWAACKKMHPA LKTIVPSVANRPGMGLPMENNVFINPNYEWAFYVGNNKYLDTVTNNNRPRFRALKFRWWESGTAYKKLDSIDGEPNRWFQ KWISHPSFDSYWQKMAPYKTDFSQINIPVLAFDGYYNDSQNSSLYYLKELQKYSPKTPFYLVIGPYGHFGTQIGGEAVLN DYKVDPVSLFDIKKITYEWFDYILKNGAKPEILKDKINYEVMGANEWKSAPSFEKMHNNYLTFYLTSAVSQDFRLADTKK PKKKEFLTQEVDFANREISNNNYYPSPIIQKEVNKNDGYFFISEPLTEPLIVNGSFLGEIKLSINKKDLDLGVTLYEVTP NGEYFHLSYYIGRVSYAKDIEKRQLLEPNKIETIAFSNTHFVSRQLSKGSRLLIALNVNKNPFSQLNYGTGKEVSDETIL DAKEPLKIKWYNDSFVKIPVLK
Sequences:
>Translated_582_residues MIHKVTLLFLSLFFMVISVSAQQTKAAKLADQENAYDIQDSISIKTRDGAILSAMIARKKNDNEPQPVILQYTIYVRDKG RDLKSIKESVDKGYIGIIVYSRGKRFSPDEINPYEDEANDVYDAIDWISKQKWCNGKTAMYGGSYNGFTQWAACKKMHPA LKTIVPSVANRPGMGLPMENNVFINPNYEWAFYVGNNKYLDTVTNNNRPRFRALKFRWWESGTAYKKLDSIDGEPNRWFQ KWISHPSFDSYWQKMAPYKTDFSQINIPVLAFDGYYNDSQNSSLYYLKELQKYSPKTPFYLVIGPYGHFGTQIGGEAVLN DYKVDPVSLFDIKKITYEWFDYILKNGAKPEILKDKINYEVMGANEWKSAPSFEKMHNNYLTFYLTSAVSQDFRLADTKK PKKKEFLTQEVDFANREISNNNYYPSPIIQKEVNKNDGYFFISEPLTEPLIVNGSFLGEIKLSINKKDLDLGVTLYEVTP NGEYFHLSYYIGRVSYAKDIEKRQLLEPNKIETIAFSNTHFVSRQLSKGSRLLIALNVNKNPFSQLNYGTGKEVSDETIL DAKEPLKIKWYNDSFVKIPVLK >Mature_582_residues MIHKVTLLFLSLFFMVISVSAQQTKAAKLADQENAYDIQDSISIKTRDGAILSAMIARKKNDNEPQPVILQYTIYVRDKG RDLKSIKESVDKGYIGIIVYSRGKRFSPDEINPYEDEANDVYDAIDWISKQKWCNGKTAMYGGSYNGFTQWAACKKMHPA LKTIVPSVANRPGMGLPMENNVFINPNYEWAFYVGNNKYLDTVTNNNRPRFRALKFRWWESGTAYKKLDSIDGEPNRWFQ KWISHPSFDSYWQKMAPYKTDFSQINIPVLAFDGYYNDSQNSSLYYLKELQKYSPKTPFYLVIGPYGHFGTQIGGEAVLN DYKVDPVSLFDIKKITYEWFDYILKNGAKPEILKDKINYEVMGANEWKSAPSFEKMHNNYLTFYLTSAVSQDFRLADTKK PKKKEFLTQEVDFANREISNNNYYPSPIIQKEVNKNDGYFFISEPLTEPLIVNGSFLGEIKLSINKKDLDLGVTLYEVTP NGEYFHLSYYIGRVSYAKDIEKRQLLEPNKIETIAFSNTHFVSRQLSKGSRLLIALNVNKNPFSQLNYGTGKEVSDETIL DAKEPLKIKWYNDSFVKIPVLK
Specific function: Hydrolyzes cocaine to benzoate and ecgonine methyl ester, endowing the bacteria with the ability to utilize cocaine as a sole source of carbon and energy for growth, as this bacterium lives in the rhizosphere of coca plants [H]
COG id: COG2936
COG function: function code R; Predicted acyl esterases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta hydrolase family. Carboxylesterase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005674 - InterPro: IPR008979 - InterPro: IPR013736 - InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15; PF08530 PepX_C [H]
EC number: NA
Molecular weight: Translated: 67195; Mature: 67195
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHKVTLLFLSLFFMVISVSAQQTKAAKLADQENAYDIQDSISIKTRDGAILSAMIARKK CCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCEEEEECCCHHHHHHHHHCC NDNEPQPVILQYTIYVRDKGRDLKSIKESVDKGYIGIIVYSRGKRFSPDEINPYEDEAND CCCCCCCEEEEEEEEEEECCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHH VYDAIDWISKQKWCNGKTAMYGGSYNGFTQWAACKKMHPALKTIVPSVANRPGMGLPMEN HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NVFINPNYEWAFYVGNNKYLDTVTNNNRPRFRALKFRWWESGTAYKKLDSIDGEPNRWFQ CEEECCCCEEEEEECCCEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHCCCCCHHHHHH KWISHPSFDSYWQKMAPYKTDFSQINIPVLAFDGYYNDSQNSSLYYLKELQKYSPKTPFY HHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEE LVIGPYGHFGTQIGGEAVLNDYKVDPVSLFDIKKITYEWFDYILKNGAKPEILKDKINYE EEECCCCCCCCCCCCHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCEE VMGANEWKSAPSFEKMHNNYLTFYLTSAVSQDFRLADTKKPKKKEFLTQEVDFANREISN EECCCCCCCCCCHHHHCCCEEEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCC NNYYPSPIIQKEVNKNDGYFFISEPLTEPLIVNGSFLGEIKLSINKKDLDLGVTLYEVTP CCCCCCCHHHHHCCCCCCEEEEECCCCCCEEECCCEEEEEEEEEECCCCEEEEEEEEECC NGEYFHLSYYIGRVSYAKDIEKRQLLEPNKIETIAFSNTHFVSRQLSKGSRLLIALNVNK CCCEEEEEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCEEEEEEECCC NPFSQLNYGTGKEVSDETILDAKEPLKIKWYNDSFVKIPVLK CCHHHCCCCCCCCCCCCHHCCCCCCEEEEEECCCEEEEECCC >Mature Secondary Structure MIHKVTLLFLSLFFMVISVSAQQTKAAKLADQENAYDIQDSISIKTRDGAILSAMIARKK CCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCEEEEECCCHHHHHHHHHCC NDNEPQPVILQYTIYVRDKGRDLKSIKESVDKGYIGIIVYSRGKRFSPDEINPYEDEAND CCCCCCCEEEEEEEEEEECCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHH VYDAIDWISKQKWCNGKTAMYGGSYNGFTQWAACKKMHPALKTIVPSVANRPGMGLPMEN HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NVFINPNYEWAFYVGNNKYLDTVTNNNRPRFRALKFRWWESGTAYKKLDSIDGEPNRWFQ CEEECCCCEEEEEECCCEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHCCCCCHHHHHH KWISHPSFDSYWQKMAPYKTDFSQINIPVLAFDGYYNDSQNSSLYYLKELQKYSPKTPFY HHHCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEE LVIGPYGHFGTQIGGEAVLNDYKVDPVSLFDIKKITYEWFDYILKNGAKPEILKDKINYE EEECCCCCCCCCCCCHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCEE VMGANEWKSAPSFEKMHNNYLTFYLTSAVSQDFRLADTKKPKKKEFLTQEVDFANREISN EECCCCCCCCCCHHHHCCCEEEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCC NNYYPSPIIQKEVNKNDGYFFISEPLTEPLIVNGSFLGEIKLSINKKDLDLGVTLYEVTP CCCCCCCHHHHHCCCCCCEEEEECCCCCCEEECCCEEEEEEEEEECCCCEEEEEEEEECC NGEYFHLSYYIGRVSYAKDIEKRQLLEPNKIETIAFSNTHFVSRQLSKGSRLLIALNVNK CCCEEEEEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCEEEEEEECCC NPFSQLNYGTGKEVSDETILDAKEPLKIKWYNDSFVKIPVLK CCHHHCCCCCCCCCCCCHHCCCCCCEEEEEECCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10698749; 11742345; 12369817 [H]