Click here to switch to the map view.

The map label for this gene is yneN [H]

Identifier: 146302278

GI number: 146302278

Start: 5496672

End: 5497442

Strand: Reverse

Name: yneN [H]

Synonym: Fjoh_4551

Alternate gene names: 146302278

Gene position: 5497442-5496672 (Counterclockwise)

Preceding gene: 146302279

Following gene: 146302277

Centisome position: 90.17

GC content: 31.91

Gene sequence:

>771_bases
ATGCAGAAATTCATCAGCCTAATTACTCTTCTTTTAATTTTTACAATAAGTACAGCTCAAAATAAATTCGGAAATCCAGA
AGTTGATCCAATTCAAATTCAAAAAACTTTCCAAGATTGGTCTGCTTACAATAAAAAAATAATGCTTTCCAGAGATTTTA
CTGCTTTAGACGCATCTTCAAAAGAAATTTCAAAAGAATCTTTTTTAGATCAGCTGGCTAATGGAAATTTCATCCCGGTT
AGATTAAAATCAGAAGCTGCTATTTACATTTATAAGTTATTTAAAATTCAGCCAAAATCAGATACGAGTATAAAAGCAAC
AATTAATCAAATAGGTTTTGATGCTTACAAAAACTATAAAATGGAAGGAACAGCATTTCCAAAATTCTCTTTTAAAGATT
TAGACGGAAATCTGGTAACCAATGAATCCATGAAAGGAAAAATTATCGTTATAAAATGCTGGTACATTCATTGCACGCCA
TGCATTAGAGAATTTCCGCAAGTAAACAAACTGGTTTCAGCATATAAAGACCGAAAAGATATTGTTTTTATGAGTTTGGC
CGAAGATTCACCAGAACAATTAAAAACATTCTTAGCCAGAAAACCTCTCTTGTATTCTGTAATTCCAAACATGAAAGATT
ACATGAACGAAGCCTTACAGCTCAATTCATTTCCAACACATTTTATTTTAAACAAAGAAGGAATGATTGCAAAAGTGCTC
CCAAACTTTGAGAGTCTTGAAGTGGCGCTTGCGAAAGAAAGTAAGCTCTAG

Upstream 100 bases:

>100_bases
ATTGGGAGCGAGAAACCCTTTGCGAACTTTGCGAATACCTTCGCGTCTTTGCGGTTAAAAAACTTTCACTATTTTTGAGA
TCAAATACAATTGTTTCATA

Downstream 100 bases:

>100_bases
CTAAATTAATCTCGCAAAGTAACCCCATTTTTGTCATTTCGACTGAAAGGAGAAATCTCACTAGTTAATCGATAAAGTAA
CCCCATTTTTGTCATTTCGA

Product: redoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MQKFISLITLLLIFTISTAQNKFGNPEVDPIQIQKTFQDWSAYNKKIMLSRDFTALDASSKEISKESFLDQLANGNFIPV
RLKSEAAIYIYKLFKIQPKSDTSIKATINQIGFDAYKNYKMEGTAFPKFSFKDLDGNLVTNESMKGKIIVIKCWYIHCTP
CIREFPQVNKLVSAYKDRKDIVFMSLAEDSPEQLKTFLARKPLLYSVIPNMKDYMNEALQLNSFPTHFILNKEGMIAKVL
PNFESLEVALAKESKL

Sequences:

>Translated_256_residues
MQKFISLITLLLIFTISTAQNKFGNPEVDPIQIQKTFQDWSAYNKKIMLSRDFTALDASSKEISKESFLDQLANGNFIPV
RLKSEAAIYIYKLFKIQPKSDTSIKATINQIGFDAYKNYKMEGTAFPKFSFKDLDGNLVTNESMKGKIIVIKCWYIHCTP
CIREFPQVNKLVSAYKDRKDIVFMSLAEDSPEQLKTFLARKPLLYSVIPNMKDYMNEALQLNSFPTHFILNKEGMIAKVL
PNFESLEVALAKESKL
>Mature_256_residues
MQKFISLITLLLIFTISTAQNKFGNPEVDPIQIQKTFQDWSAYNKKIMLSRDFTALDASSKEISKESFLDQLANGNFIPV
RLKSEAAIYIYKLFKIQPKSDTSIKATINQIGFDAYKNYKMEGTAFPKFSFKDLDGNLVTNESMKGKIIVIKCWYIHCTP
CIREFPQVNKLVSAYKDRKDIVFMSLAEDSPEQLKTFLARKPLLYSVIPNMKDYMNEALQLNSFPTHFILNKEGMIAKVL
PNFESLEVALAKESKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 29329; Mature: 29329

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFISLITLLLIFTISTAQNKFGNPEVDPIQIQKTFQDWSAYNKKIMLSRDFTALDASS
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCEEEEECCCEEECCCH
KEISKESFLDQLANGNFIPVRLKSEAAIYIYKLFKIQPKSDTSIKATINQIGFDAYKNYK
HHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHCHHHHHCCC
MEGTAFPKFSFKDLDGNLVTNESMKGKIIVIKCWYIHCTPCIREFPQVNKLVSAYKDRKD
CCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCHHHHHCHHHHHHHHHHCCCCC
IVFMSLAEDSPEQLKTFLARKPLLYSVIPNMKDYMNEALQLNSFPTHFILNKEGMIAKVL
EEEEEECCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEC
PNFESLEVALAKESKL
CCCCHHEEEEECCCCC
>Mature Secondary Structure
MQKFISLITLLLIFTISTAQNKFGNPEVDPIQIQKTFQDWSAYNKKIMLSRDFTALDASS
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCEEEEECCCEEECCCH
KEISKESFLDQLANGNFIPVRLKSEAAIYIYKLFKIQPKSDTSIKATINQIGFDAYKNYK
HHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHCHHHHHCCC
MEGTAFPKFSFKDLDGNLVTNESMKGKIIVIKCWYIHCTPCIREFPQVNKLVSAYKDRKD
CCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCHHHHHCHHHHHHHHHHCCCCC
IVFMSLAEDSPEQLKTFLARKPLLYSVIPNMKDYMNEALQLNSFPTHFILNKEGMIAKVL
EEEEEECCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEC
PNFESLEVALAKESKL
CCCCHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]