Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302266

Identifier: 146302266

GI number: 146302266

Start: 5484836

End: 5485753

Strand: Direct

Name: 146302266

Synonym: Fjoh_4539

Alternate gene names: NA

Gene position: 5484836-5485753 (Clockwise)

Preceding gene: 146302265

Following gene: 146302267

Centisome position: 89.96

GC content: 36.38

Gene sequence:

>918_bases
ATGAGAACAAAATTATTTTTTTTCGTCATTATGTTTGTAACCATTGCGGGTTATGCACAGCAAGATGCACAGTTTACGCA
ATATATGTACAATACGATTAATATAAATCCCGCTTATGCAGGATCCAGAGGCGCTCTAAGTATTTTTGGTTTATACCGTA
CACAATGGATAGGACTTGACGGCGCTCCAGAAACAAGCAGTTTTTCTATCAACACTCCAATCAACAACAGTAATTTAGGA
GTCGGCCTTTCACTTGTAAATGATAAAATTGGGCCAACAAACGAAAACAATATATCAGCAGATATATCGTATACCGTTCA
GACTTCTGCCGATTTTAAACTGTCGTTTGGTATCAAAGGAACTGCTAATATATTCAATCTCGATGTCAACAAACTAAATC
CGTCAGAACAAGGAGATCCACAGTTTCAGGATTTAAACAACAAATTTAGTCCAAATGTGGGAGCTGGAGTTTACTGGCAT
TCAGATAAAGCCTATATCGGTTTATCAGTTCCCAATTTCATCGAAACTAATAGATACAGTGATAACGACATTGCTATTTA
CAAAGACAAAATCAATTATTATTTAATGGCCGGTTATGTTTTTGATTTGGATAAATTACAATATATCAAATTCAAACCCG
CAGTTTTAACCAAAATGGTTGAAGGAGCACCGCTGCAAGTCGATGTTTCTGCCAACTTTATGTTTATTGACAAACTTGTT
TTGGGTGTTGCTTACAGATGGAGTGCTTCTCTAAGCGCTATGGCAGGATTTCAAATCACCGACGGACTTTATATAGGATA
TGGATACGACCGCGAAACCACAAACCTAAATAATTATAATTCAGGATCGCATGAAATATTCCTGCGTTACGAATTCTTCA
AAAACAATGGTAAAATGACAACTCCTCGTTTCTTCTAA

Upstream 100 bases:

>100_bases
AGGGTATTTATATCTGTCTAAATAGGAACAAAAAAGTAATGCGTTATACAACGCACGAAGTATAGCGCATTACATATTCA
CTAAACAATACACATCTATT

Downstream 100 bases:

>100_bases
AAAATAGGTATTATGAAAAATTATAGACTTCTCTGCTTAATAATTCTAAATGTTTTTTATGGTTATTCTCAGCAGTCAAA
GCTGAACTCAGCCGATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MRTKLFFFVIMFVTIAGYAQQDAQFTQYMYNTININPAYAGSRGALSIFGLYRTQWIGLDGAPETSSFSINTPINNSNLG
VGLSLVNDKIGPTNENNISADISYTVQTSADFKLSFGIKGTANIFNLDVNKLNPSEQGDPQFQDLNNKFSPNVGAGVYWH
SDKAYIGLSVPNFIETNRYSDNDIAIYKDKINYYLMAGYVFDLDKLQYIKFKPAVLTKMVEGAPLQVDVSANFMFIDKLV
LGVAYRWSASLSAMAGFQITDGLYIGYGYDRETTNLNNYNSGSHEIFLRYEFFKNNGKMTTPRFF

Sequences:

>Translated_305_residues
MRTKLFFFVIMFVTIAGYAQQDAQFTQYMYNTININPAYAGSRGALSIFGLYRTQWIGLDGAPETSSFSINTPINNSNLG
VGLSLVNDKIGPTNENNISADISYTVQTSADFKLSFGIKGTANIFNLDVNKLNPSEQGDPQFQDLNNKFSPNVGAGVYWH
SDKAYIGLSVPNFIETNRYSDNDIAIYKDKINYYLMAGYVFDLDKLQYIKFKPAVLTKMVEGAPLQVDVSANFMFIDKLV
LGVAYRWSASLSAMAGFQITDGLYIGYGYDRETTNLNNYNSGSHEIFLRYEFFKNNGKMTTPRFF
>Mature_305_residues
MRTKLFFFVIMFVTIAGYAQQDAQFTQYMYNTININPAYAGSRGALSIFGLYRTQWIGLDGAPETSSFSINTPINNSNLG
VGLSLVNDKIGPTNENNISADISYTVQTSADFKLSFGIKGTANIFNLDVNKLNPSEQGDPQFQDLNNKFSPNVGAGVYWH
SDKAYIGLSVPNFIETNRYSDNDIAIYKDKINYYLMAGYVFDLDKLQYIKFKPAVLTKMVEGAPLQVDVSANFMFIDKLV
LGVAYRWSASLSAMAGFQITDGLYIGYGYDRETTNLNNYNSGSHEIFLRYEFFKNNGKMTTPRFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34258; Mature: 34258

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTKLFFFVIMFVTIAGYAQQDAQFTQYMYNTININPAYAGSRGALSIFGLYRTQWIGLD
CCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCCCCEEEEEEEEEEEECCC
GAPETSSFSINTPINNSNLGVGLSLVNDKIGPTNENNISADISYTVQTSADFKLSFGIKG
CCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEECCCC
TANIFNLDVNKLNPSEQGDPQFQDLNNKFSPNVGAGVYWHSDKAYIGLSVPNFIETNRYS
CCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCC
DNDIAIYKDKINYYLMAGYVFDLDKLQYIKFKPAVLTKMVEGAPLQVDVSANFMFIDKLV
CCCEEEEEECCCEEEEEEEEEECCCEEEEEECHHHHHHHHCCCCEEEEECCCEEEEHHHH
LGVAYRWSASLSAMAGFQITDGLYIGYGYDRETTNLNNYNSGSHEIFLRYEFFKNNGKMT
HHHHEECCCCHHHHCCEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC
TPRFF
CCCCC
>Mature Secondary Structure
MRTKLFFFVIMFVTIAGYAQQDAQFTQYMYNTININPAYAGSRGALSIFGLYRTQWIGLD
CCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCCCCEEEEEEEEEEEECCC
GAPETSSFSINTPINNSNLGVGLSLVNDKIGPTNENNISADISYTVQTSADFKLSFGIKG
CCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEECCCC
TANIFNLDVNKLNPSEQGDPQFQDLNNKFSPNVGAGVYWHSDKAYIGLSVPNFIETNRYS
CCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCC
DNDIAIYKDKINYYLMAGYVFDLDKLQYIKFKPAVLTKMVEGAPLQVDVSANFMFIDKLV
CCCEEEEEECCCEEEEEEEEEECCCEEEEEECHHHHHHHHCCCCEEEEECCCEEEEHHHH
LGVAYRWSASLSAMAGFQITDGLYIGYGYDRETTNLNNYNSGSHEIFLRYEFFKNNGKMT
HHHHEECCCCHHHHCCEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC
TPRFF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA