| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302266
Identifier: 146302266
GI number: 146302266
Start: 5484836
End: 5485753
Strand: Direct
Name: 146302266
Synonym: Fjoh_4539
Alternate gene names: NA
Gene position: 5484836-5485753 (Clockwise)
Preceding gene: 146302265
Following gene: 146302267
Centisome position: 89.96
GC content: 36.38
Gene sequence:
>918_bases ATGAGAACAAAATTATTTTTTTTCGTCATTATGTTTGTAACCATTGCGGGTTATGCACAGCAAGATGCACAGTTTACGCA ATATATGTACAATACGATTAATATAAATCCCGCTTATGCAGGATCCAGAGGCGCTCTAAGTATTTTTGGTTTATACCGTA CACAATGGATAGGACTTGACGGCGCTCCAGAAACAAGCAGTTTTTCTATCAACACTCCAATCAACAACAGTAATTTAGGA GTCGGCCTTTCACTTGTAAATGATAAAATTGGGCCAACAAACGAAAACAATATATCAGCAGATATATCGTATACCGTTCA GACTTCTGCCGATTTTAAACTGTCGTTTGGTATCAAAGGAACTGCTAATATATTCAATCTCGATGTCAACAAACTAAATC CGTCAGAACAAGGAGATCCACAGTTTCAGGATTTAAACAACAAATTTAGTCCAAATGTGGGAGCTGGAGTTTACTGGCAT TCAGATAAAGCCTATATCGGTTTATCAGTTCCCAATTTCATCGAAACTAATAGATACAGTGATAACGACATTGCTATTTA CAAAGACAAAATCAATTATTATTTAATGGCCGGTTATGTTTTTGATTTGGATAAATTACAATATATCAAATTCAAACCCG CAGTTTTAACCAAAATGGTTGAAGGAGCACCGCTGCAAGTCGATGTTTCTGCCAACTTTATGTTTATTGACAAACTTGTT TTGGGTGTTGCTTACAGATGGAGTGCTTCTCTAAGCGCTATGGCAGGATTTCAAATCACCGACGGACTTTATATAGGATA TGGATACGACCGCGAAACCACAAACCTAAATAATTATAATTCAGGATCGCATGAAATATTCCTGCGTTACGAATTCTTCA AAAACAATGGTAAAATGACAACTCCTCGTTTCTTCTAA
Upstream 100 bases:
>100_bases AGGGTATTTATATCTGTCTAAATAGGAACAAAAAAGTAATGCGTTATACAACGCACGAAGTATAGCGCATTACATATTCA CTAAACAATACACATCTATT
Downstream 100 bases:
>100_bases AAAATAGGTATTATGAAAAATTATAGACTTCTCTGCTTAATAATTCTAAATGTTTTTTATGGTTATTCTCAGCAGTCAAA GCTGAACTCAGCCGATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MRTKLFFFVIMFVTIAGYAQQDAQFTQYMYNTININPAYAGSRGALSIFGLYRTQWIGLDGAPETSSFSINTPINNSNLG VGLSLVNDKIGPTNENNISADISYTVQTSADFKLSFGIKGTANIFNLDVNKLNPSEQGDPQFQDLNNKFSPNVGAGVYWH SDKAYIGLSVPNFIETNRYSDNDIAIYKDKINYYLMAGYVFDLDKLQYIKFKPAVLTKMVEGAPLQVDVSANFMFIDKLV LGVAYRWSASLSAMAGFQITDGLYIGYGYDRETTNLNNYNSGSHEIFLRYEFFKNNGKMTTPRFF
Sequences:
>Translated_305_residues MRTKLFFFVIMFVTIAGYAQQDAQFTQYMYNTININPAYAGSRGALSIFGLYRTQWIGLDGAPETSSFSINTPINNSNLG VGLSLVNDKIGPTNENNISADISYTVQTSADFKLSFGIKGTANIFNLDVNKLNPSEQGDPQFQDLNNKFSPNVGAGVYWH SDKAYIGLSVPNFIETNRYSDNDIAIYKDKINYYLMAGYVFDLDKLQYIKFKPAVLTKMVEGAPLQVDVSANFMFIDKLV LGVAYRWSASLSAMAGFQITDGLYIGYGYDRETTNLNNYNSGSHEIFLRYEFFKNNGKMTTPRFF >Mature_305_residues MRTKLFFFVIMFVTIAGYAQQDAQFTQYMYNTININPAYAGSRGALSIFGLYRTQWIGLDGAPETSSFSINTPINNSNLG VGLSLVNDKIGPTNENNISADISYTVQTSADFKLSFGIKGTANIFNLDVNKLNPSEQGDPQFQDLNNKFSPNVGAGVYWH SDKAYIGLSVPNFIETNRYSDNDIAIYKDKINYYLMAGYVFDLDKLQYIKFKPAVLTKMVEGAPLQVDVSANFMFIDKLV LGVAYRWSASLSAMAGFQITDGLYIGYGYDRETTNLNNYNSGSHEIFLRYEFFKNNGKMTTPRFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34258; Mature: 34258
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTKLFFFVIMFVTIAGYAQQDAQFTQYMYNTININPAYAGSRGALSIFGLYRTQWIGLD CCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCCCCEEEEEEEEEEEECCC GAPETSSFSINTPINNSNLGVGLSLVNDKIGPTNENNISADISYTVQTSADFKLSFGIKG CCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEECCCC TANIFNLDVNKLNPSEQGDPQFQDLNNKFSPNVGAGVYWHSDKAYIGLSVPNFIETNRYS CCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCC DNDIAIYKDKINYYLMAGYVFDLDKLQYIKFKPAVLTKMVEGAPLQVDVSANFMFIDKLV CCCEEEEEECCCEEEEEEEEEECCCEEEEEECHHHHHHHHCCCCEEEEECCCEEEEHHHH LGVAYRWSASLSAMAGFQITDGLYIGYGYDRETTNLNNYNSGSHEIFLRYEFFKNNGKMT HHHHEECCCCHHHHCCEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC TPRFF CCCCC >Mature Secondary Structure MRTKLFFFVIMFVTIAGYAQQDAQFTQYMYNTININPAYAGSRGALSIFGLYRTQWIGLD CCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCCCCEEEEEEEEEEEECCC GAPETSSFSINTPINNSNLGVGLSLVNDKIGPTNENNISADISYTVQTSADFKLSFGIKG CCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEEEECCCC TANIFNLDVNKLNPSEQGDPQFQDLNNKFSPNVGAGVYWHSDKAYIGLSVPNFIETNRYS CCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCC DNDIAIYKDKINYYLMAGYVFDLDKLQYIKFKPAVLTKMVEGAPLQVDVSANFMFIDKLV CCCEEEEEECCCEEEEEEEEEECCCEEEEEECHHHHHHHHCCCCEEEEECCCEEEEHHHH LGVAYRWSASLSAMAGFQITDGLYIGYGYDRETTNLNNYNSGSHEIFLRYEFFKNNGKMT HHHHEECCCCHHHHCCEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC TPRFF CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA