Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302255

Identifier: 146302255

GI number: 146302255

Start: 5467777

End: 5468256

Strand: Reverse

Name: 146302255

Synonym: Fjoh_4528

Alternate gene names: NA

Gene position: 5468256-5467777 (Counterclockwise)

Preceding gene: 146302256

Following gene: 146302254

Centisome position: 89.69

GC content: 35.83

Gene sequence:

>480_bases
ATGAAAATCAAATCAATTTTATTGGGAACGGGGCTTGCCTTTTCTTTATTGGCTTGCAGCGCTAAAGATGCTGATATTGA
AAAAGAAATCAATGCAAAACTAAATGATACACCAGGAATACATGTAACAGTGCATGAAGGTGTTGCGACCATTGTGGGAA
CTTGTGATGATGATGCTTTCAAGAAAAACATTGAGAGTTCTGTTAAATCAGTTAAAGGAGTCAAAACTGTAATAAACAAC
TGCCAGATTCCAGAGCCAAATGTAGAACCAGCGGCAGCAGCTGTTATAATTAATTCTGATGCTGATTTAGATAAATCGGT
ACATAAAATTGTGGATGCTTATGATGGTGTCAGCGCAACAGTTGTGGGTGGTGTAATTACCCTTTCAGGAGAAATAAAAA
GAGATAAACTACAGCCATTGATGCAGAGTTTACAAGAACTGAAACCCAAAAAAGTTGATAACAAATTAACTATTAAATAA

Upstream 100 bases:

>100_bases
TCTTTTACTGGAAAAGATATAAGAACCACAAGCATATCATATAAAGTTTTACTGGTTAATCTGGTTAATTTTAGATAGTT
AATTATTAAAACAAATTGTT

Downstream 100 bases:

>100_bases
AATTGTTATGAGTTTACAAGATAAATACAGAGAACTGACCAATTTAGCCGGCGATTTACAAATAGCCAATTTACAGGTTA
GAGAACAAGATAATGTGCTG

Product: transport-associated protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKIKSILLGTGLAFSLLACSAKDADIEKEINAKLNDTPGIHVTVHEGVATIVGTCDDDAFKKNIESSVKSVKGVKTVINN
CQIPEPNVEPAAAAVIINSDADLDKSVHKIVDAYDGVSATVVGGVITLSGEIKRDKLQPLMQSLQELKPKKVDNKLTIK

Sequences:

>Translated_159_residues
MKIKSILLGTGLAFSLLACSAKDADIEKEINAKLNDTPGIHVTVHEGVATIVGTCDDDAFKKNIESSVKSVKGVKTVINN
CQIPEPNVEPAAAAVIINSDADLDKSVHKIVDAYDGVSATVVGGVITLSGEIKRDKLQPLMQSLQELKPKKVDNKLTIK
>Mature_159_residues
MKIKSILLGTGLAFSLLACSAKDADIEKEINAKLNDTPGIHVTVHEGVATIVGTCDDDAFKKNIESSVKSVKGVKTVINN
CQIPEPNVEPAAAAVIINSDADLDKSVHKIVDAYDGVSATVVGGVITLSGEIKRDKLQPLMQSLQELKPKKVDNKLTIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16875; Mature: 16875

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKSILLGTGLAFSLLACSAKDADIEKEINAKLNDTPGIHVTVHEGVATIVGTCDDDAF
CCCHHHHHHCCHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEEECCCCEEEEECCCCHHH
KKNIESSVKSVKGVKTVINNCQIPEPNVEPAAAAVIINSDADLDKSVHKIVDAYDGVSAT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHH
VVGGVITLSGEIKRDKLQPLMQSLQELKPKKVDNKLTIK
HHCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEECC
>Mature Secondary Structure
MKIKSILLGTGLAFSLLACSAKDADIEKEINAKLNDTPGIHVTVHEGVATIVGTCDDDAF
CCCHHHHHHCCHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEEECCCCEEEEECCCCHHH
KKNIESSVKSVKGVKTVINNCQIPEPNVEPAAAAVIINSDADLDKSVHKIVDAYDGVSAT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHH
VVGGVITLSGEIKRDKLQPLMQSLQELKPKKVDNKLTIK
HHCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA