| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302195
Identifier: 146302195
GI number: 146302195
Start: 5386736
End: 5387176
Strand: Direct
Name: 146302195
Synonym: Fjoh_4466
Alternate gene names: NA
Gene position: 5386736-5387176 (Clockwise)
Preceding gene: 146302194
Following gene: 146302196
Centisome position: 88.35
GC content: 39.46
Gene sequence:
>441_bases ATGAAAAAAATACTCTTAATTCTCCATGTGATGGTGATGTCCCACGCATTTGGGCAGACCGCGATAGAAAACGCAAAACA ACAAGCCAAAGAACAGCACCGATTGATTCTATTGAATTTTTCGGGTTCAGATTGGTGTGTACCCTGCATCAAAATGCACA AAACCATTTTTGAAAACGGAACCTACAAACAAATGGCCGACAGCCTTTTGGTGTATGTAAATGCGGATTTTCCGAGAAAA AAGAAAAACCAGCCCTTATCTCAAACCATAAAGGAAAATGAAGCTTTGGCAGATAAATATAATCCCGGCGGCGCTTTCCC TTTTACCCTTTTACTGGATGCGGATGGAAAAATAATAAAAACCTGGGAAGGCCTCCCGAAAGAAGGTGTTGATGGGTTTA CAAACGAAATCATAACCCTATACAAAAAAGTAAAAAAATGA
Upstream 100 bases:
>100_bases AAAGGACGAATGAAAGAAAAGCAGCATTAGACAGCATATTTTATCGGCAAAATTCAGCGCTAATAGTATCGTTAAAAAAC ATTTATAAAAATTAAAAACA
Downstream 100 bases:
>100_bases CAGCAAAGGAATTTCGCAAAACCGAAAAGCTGATGGGCAATGCCTTTGAAATCACGGTAGTGGGAGCAGATGAGGTTTTA GCCTATCAACAAATTGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKKILLILHVMVMSHAFGQTAIENAKQQAKEQHRLILLNFSGSDWCVPCIKMHKTIFENGTYKQMADSLLVYVNADFPRK KKNQPLSQTIKENEALADKYNPGGAFPFTLLLDADGKIIKTWEGLPKEGVDGFTNEIITLYKKVKK
Sequences:
>Translated_146_residues MKKILLILHVMVMSHAFGQTAIENAKQQAKEQHRLILLNFSGSDWCVPCIKMHKTIFENGTYKQMADSLLVYVNADFPRK KKNQPLSQTIKENEALADKYNPGGAFPFTLLLDADGKIIKTWEGLPKEGVDGFTNEIITLYKKVKK >Mature_146_residues MKKILLILHVMVMSHAFGQTAIENAKQQAKEQHRLILLNFSGSDWCVPCIKMHKTIFENGTYKQMADSLLVYVNADFPRK KKNQPLSQTIKENEALADKYNPGGAFPFTLLLDADGKIIKTWEGLPKEGVDGFTNEIITLYKKVKK
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16568; Mature: 16568
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLILHVMVMSHAFGQTAIENAKQQAKEQHRLILLNFSGSDWCVPCIKMHKTIFENG CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCC TYKQMADSLLVYVNADFPRKKKNQPLSQTIKENEALADKYNPGGAFPFTLLLDADGKIIK CHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEE TWEGLPKEGVDGFTNEIITLYKKVKK CCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKKILLILHVMVMSHAFGQTAIENAKQQAKEQHRLILLNFSGSDWCVPCIKMHKTIFENG CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCC TYKQMADSLLVYVNADFPRKKKNQPLSQTIKENEALADKYNPGGAFPFTLLLDADGKIIK CHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEE TWEGLPKEGVDGFTNEIITLYKKVKK CCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA