| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146302185
Identifier: 146302185
GI number: 146302185
Start: 5372318
End: 5372728
Strand: Reverse
Name: 146302185
Synonym: Fjoh_4454
Alternate gene names: NA
Gene position: 5372728-5372318 (Counterclockwise)
Preceding gene: 146302186
Following gene: 146302179
Centisome position: 88.12
GC content: 30.9
Gene sequence:
>411_bases GTGCTTAAAATCGATTATCAGCAGATGAAAAAAGGATCTAAATTAAATAGCATTTTAACAGGGAACTGTCCTAAATGCCA GAATGAGAACATGTATTTGGATAAAAATCTATTGCATTTAGGTTCGGTTTTAAAAATGCACGAGAAATGCAGCCATTGTG GGCTAAGGTACCAAATAGAGCCTTCTTTCTTTTTTGGCGCAATGTATGTAAGTTATGGATTGAATGTTGGGGTAGGAATT GCAACTTTCATTATTTCATATGTTATCTTTGAATCGAGTATAAAAACATCCTTTATTGCAATTATTGCAGTACTGATTAT TTTATTTCCAGTATTATTGAGATTATCCAGAAATATTTACATAAATATGTTTATCTCCTATGATCCAAAAACAGCTATAA AAGAGAATTAG
Upstream 100 bases:
>100_bases TTTATGGTTCTGCTTAAAATTCCTTCGTCTTTTAAGATAAGCCTTGCAGGTTTATTTGGTATATACATAATTTTTAAACT AAACCACAGCTCATGGACTT
Downstream 100 bases:
>100_bases TAAAAAAAACACCTAACTTAGAAAAGGGAGAGTCTTTATTACTCTTCCCTCTTAAAAATTAGCCATCAGAACATTGGGGA TATTCTTTAGTTTTTCTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MLKIDYQQMKKGSKLNSILTGNCPKCQNENMYLDKNLLHLGSVLKMHEKCSHCGLRYQIEPSFFFGAMYVSYGLNVGVGI ATFIISYVIFESSIKTSFIAIIAVLIILFPVLLRLSRNIYINMFISYDPKTAIKEN
Sequences:
>Translated_136_residues MLKIDYQQMKKGSKLNSILTGNCPKCQNENMYLDKNLLHLGSVLKMHEKCSHCGLRYQIEPSFFFGAMYVSYGLNVGVGI ATFIISYVIFESSIKTSFIAIIAVLIILFPVLLRLSRNIYINMFISYDPKTAIKEN >Mature_136_residues MLKIDYQQMKKGSKLNSILTGNCPKCQNENMYLDKNLLHLGSVLKMHEKCSHCGLRYQIEPSFFFGAMYVSYGLNVGVGI ATFIISYVIFESSIKTSFIAIIAVLIILFPVLLRLSRNIYINMFISYDPKTAIKEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15486; Mature: 15486
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIDYQQMKKGSKLNSILTGNCPKCQNENMYLDKNLLHLGSVLKMHEKCSHCGLRYQIE CCCCCHHHHHCCCCCCCEECCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCEEEEC PSFFFGAMYVSYGLNVGVGIATFIISYVIFESSIKTSFIAIIAVLIILFPVLLRLSRNIY CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE INMFISYDPKTAIKEN EEEEEEECCCCCCCCC >Mature Secondary Structure MLKIDYQQMKKGSKLNSILTGNCPKCQNENMYLDKNLLHLGSVLKMHEKCSHCGLRYQIE CCCCCHHHHHCCCCCCCEECCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCEEEEC PSFFFGAMYVSYGLNVGVGIATFIISYVIFESSIKTSFIAIIAVLIILFPVLLRLSRNIY CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE INMFISYDPKTAIKEN EEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA