| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302150
Identifier: 146302150
GI number: 146302150
Start: 5330180
End: 5330596
Strand: Direct
Name: 146302150
Synonym: Fjoh_4418
Alternate gene names: NA
Gene position: 5330180-5330596 (Clockwise)
Preceding gene: 146302145
Following gene: 146302151
Centisome position: 87.42
GC content: 37.65
Gene sequence:
>417_bases ATGCATCTTACACTGCAAAAGAAAAACATAAAATCTTTTTTCTTTAAATTTTATATCGTAATATTGCAATATAAATATAA AACGATGGGAGCAACAAAAACAGATCACTTTACAGAAAGCCAGAATGAGCTGGCTGTTTTATCCAAAGCATTAGGCCATC CTGCGCGTATTGCTATTATGGAATATTTATTAAAAGTGGATGCCTGCATCTGCGGAGATATTGTAAACGAACTTCCCCTT TCACAGCCGACAGTTTCACAGCATTTGAAAGAGTTGAAAAATGCAGGGCTCATTAAAGGAAGCATTGAAGGAAACTCGAT CTGCTACTGCATCAACGAGCCTGGTCTGGAAAAGATAAAAGGCTTCTTTGAGCACATATCAGATCATCTGGCAAAAAAGC GAAGCGAATGCTGCTAA
Upstream 100 bases:
>100_bases AGGAGAATTGAAATTTAATTTTTCATTAGGCTATTAAAAGAGCAATATTTTTTTTTCACTGCTATTTTTGCATCTGCTAT TTTTATGCAATGATTACCTA
Downstream 100 bases:
>100_bases TCTATAAAAATATGGAAATCAGAAAACTTTCAGACAAACACTGGGATCAGGTAAAAATAATCTACCAAAAAGGAATAGAT ACCGGCAATGCCACTTTCCA
Product: regulatory protein ArsR
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator; Regulatory Protein ArsR; ArsR Family Regulatory Protein; Transcriptional Regulator; Transcriptional Regulator Arsr Family; Transcriptional Regulator ArsR Family Protein; Transcription Regulator ArsR; Regulatory Protein Arsr; Regulatory Protein
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MHLTLQKKNIKSFFFKFYIVILQYKYKTMGATKTDHFTESQNELAVLSKALGHPARIAIMEYLLKVDACICGDIVNELPL SQPTVSQHLKELKNAGLIKGSIEGNSICYCINEPGLEKIKGFFEHISDHLAKKRSECC
Sequences:
>Translated_138_residues MHLTLQKKNIKSFFFKFYIVILQYKYKTMGATKTDHFTESQNELAVLSKALGHPARIAIMEYLLKVDACICGDIVNELPL SQPTVSQHLKELKNAGLIKGSIEGNSICYCINEPGLEKIKGFFEHISDHLAKKRSECC >Mature_138_residues MHLTLQKKNIKSFFFKFYIVILQYKYKTMGATKTDHFTESQNELAVLSKALGHPARIAIMEYLLKVDACICGDIVNELPL SQPTVSQHLKELKNAGLIKGSIEGNSICYCINEPGLEKIKGFFEHISDHLAKKRSECC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15607; Mature: 15607
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLTLQKKNIKSFFFKFYIVILQYKYKTMGATKTDHFTESQNELAVLSKALGHPARIAIM CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH EYLLKVDACICGDIVNELPLSQPTVSQHLKELKNAGLIKGSIEGNSICYCINEPGLEKIK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCHHHHH GFFEHISDHLAKKRSECC HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHLTLQKKNIKSFFFKFYIVILQYKYKTMGATKTDHFTESQNELAVLSKALGHPARIAIM CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH EYLLKVDACICGDIVNELPLSQPTVSQHLKELKNAGLIKGSIEGNSICYCINEPGLEKIK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCHHHHH GFFEHISDHLAKKRSECC HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA