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The map label for this gene is exsA [H]

Identifier: 146302145

GI number: 146302145

Start: 5323012

End: 5323830

Strand: Direct

Name: exsA [H]

Synonym: Fjoh_4411

Alternate gene names: 146302145

Gene position: 5323012-5323830 (Clockwise)

Preceding gene: 146302144

Following gene: 146302150

Centisome position: 87.31

GC content: 35.78

Gene sequence:

>819_bases
ATGGATTATCAGGTAAATTACATAAACCCAGACATTAAACTTTCTAATTATTCCGGTAAGCTGTTTAAAACAGAAGCTGC
GTTTAACGACCATCTGCTTGTGTGGTTAATTTCAGGTGAAACCAAAATTATCCAGGCAGATGAAAGTTTTGTATTTGGCC
CGGGCAGTACTTTTTTAATTCCAAGAAACCAATTGGCGGCAATCATTAATATTCCAAAAGATGGACTGCCCCACAAAGCA
GTTGCCATGCATCTAACGGCTAAAAGGCTCCGGGAATTTTACGATCGCCAAAATGCAAAAATAAAAACTGCCATACCAAA
AATTTTCAGTTTCCATAAACATCCTCTGCTGGAAAGCTGTCTGGCTTCGCTGATTCCCTATTTTGACATGCAGGAAAACT
TTCCCGAGAATATCGCTTCATTAAAAATTACTGAAGCAATTTCAATTCTTAGAAACATTGATGCCGATATTGACGATGTA
CTGGCCAGCTTTGAAGAACCTGATAAAATTGATTTAACTGCTTTTATGGAGAAAAACTTTATGTTTAATATGCCTTTGGA
AAAGTTTGGCTATTTAACAGGCCGGAGTCTTACTACTTTTAAACGGGATTTTCATAAGGCTTTCAATAGTACGCCACAAC
GCTGGCTAACCAAAAAAAGATTGGAATTAGCCCATTATCAGCTTAATGAAAAAAATAAAAAACCTGTCGAGATTTATTAT
GAAACAGGTTTTGAAAATTTATCGCATTTTTCCTTTGCGTTCAAAAAACAGTTTGGCTACTCCCCGACTGAATTGCAAAA
AATAAATAAAAATAGTTAA

Upstream 100 bases:

>100_bases
TGAAAAAAATGCAAAACGTTTATGGAAATTAAGCCAGGAGATGACCGGAATAAATTTCGATCTTAGTTAATATTTGTATC
TTTATACCACACAGGCAATT

Downstream 100 bases:

>100_bases
GCTTTGTTAATAATAGCCCTCCTTAAAAATGAGCTAGCATTAGCTATTCAGAGGCATTTTTAAAATTTAAAATTGGATTT
GCTTCTTATTTTACAGAAGT

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MDYQVNYINPDIKLSNYSGKLFKTEAAFNDHLLVWLISGETKIIQADESFVFGPGSTFLIPRNQLAAIINIPKDGLPHKA
VAMHLTAKRLREFYDRQNAKIKTAIPKIFSFHKHPLLESCLASLIPYFDMQENFPENIASLKITEAISILRNIDADIDDV
LASFEEPDKIDLTAFMEKNFMFNMPLEKFGYLTGRSLTTFKRDFHKAFNSTPQRWLTKKRLELAHYQLNEKNKKPVEIYY
ETGFENLSHFSFAFKKQFGYSPTELQKINKNS

Sequences:

>Translated_272_residues
MDYQVNYINPDIKLSNYSGKLFKTEAAFNDHLLVWLISGETKIIQADESFVFGPGSTFLIPRNQLAAIINIPKDGLPHKA
VAMHLTAKRLREFYDRQNAKIKTAIPKIFSFHKHPLLESCLASLIPYFDMQENFPENIASLKITEAISILRNIDADIDDV
LASFEEPDKIDLTAFMEKNFMFNMPLEKFGYLTGRSLTTFKRDFHKAFNSTPQRWLTKKRLELAHYQLNEKNKKPVEIYY
ETGFENLSHFSFAFKKQFGYSPTELQKINKNS
>Mature_272_residues
MDYQVNYINPDIKLSNYSGKLFKTEAAFNDHLLVWLISGETKIIQADESFVFGPGSTFLIPRNQLAAIINIPKDGLPHKA
VAMHLTAKRLREFYDRQNAKIKTAIPKIFSFHKHPLLESCLASLIPYFDMQENFPENIASLKITEAISILRNIDADIDDV
LASFEEPDKIDLTAFMEKNFMFNMPLEKFGYLTGRSLTTFKRDFHKAFNSTPQRWLTKKRLELAHYQLNEKNKKPVEIYY
ETGFENLSHFSFAFKKQFGYSPTELQKINKNS

Specific function: Appears to be required for induction of exoenzyme S synthesis above a low basal level [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 31535; Mature: 31535

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYQVNYINPDIKLSNYSGKLFKTEAAFNDHLLVWLISGETKIIQADESFVFGPGSTFLI
CCEEEEEECCCEEEECCCCCEEEECCCCCCCEEEEEECCCEEEEECCCCEEECCCCEEEE
PRNQLAAIINIPKDGLPHKAVAMHLTAKRLREFYDRQNAKIKTAIPKIFSFHKHPLLESC
ECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHH
LASLIPYFDMQENFPENIASLKITEAISILRNIDADIDDVLASFEEPDKIDLTAFMEKNF
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEHEEEECCCC
MFNMPLEKFGYLTGRSLTTFKRDFHKAFNSTPQRWLTKKRLELAHYQLNEKNKKPVEIYY
EEECCHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
ETGFENLSHFSFAFKKQFGYSPTELQKINKNS
ECCCCHHHHHHHHHHHHCCCCHHHHHHCCCCC
>Mature Secondary Structure
MDYQVNYINPDIKLSNYSGKLFKTEAAFNDHLLVWLISGETKIIQADESFVFGPGSTFLI
CCEEEEEECCCEEEECCCCCEEEECCCCCCCEEEEEECCCEEEEECCCCEEECCCCEEEE
PRNQLAAIINIPKDGLPHKAVAMHLTAKRLREFYDRQNAKIKTAIPKIFSFHKHPLLESC
ECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHH
LASLIPYFDMQENFPENIASLKITEAISILRNIDADIDDVLASFEEPDKIDLTAFMEKNF
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEHEEEECCCC
MFNMPLEKFGYLTGRSLTTFKRDFHKAFNSTPQRWLTKKRLELAHYQLNEKNKKPVEIYY
EEECCHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
ETGFENLSHFSFAFKKQFGYSPTELQKINKNS
ECCCCHHHHHHHHHHHHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1655713; 10984043 [H]