| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302137
Identifier: 146302137
GI number: 146302137
Start: 5310465
End: 5311517
Strand: Direct
Name: 146302137
Synonym: Fjoh_4403
Alternate gene names: NA
Gene position: 5310465-5311517 (Clockwise)
Preceding gene: 146302136
Following gene: 146302138
Centisome position: 87.1
GC content: 42.45
Gene sequence:
>1053_bases ATGAAAAATTTACTCTTTTTTTTATTTTCTATACTAATATTTCAAACAGCACAGTCTCAAAAAAATTCTTTAAAAAAGAT CTTAGTCCTGCAGCAGCCAGGTATCAAAGACACCATATTTCATTTAAGCACCCTGGATTCCATTAGGGCAGATCTACCCG CAACTCTAATTAAAGGCAGCCAGAGCGGTCCCACTTTTACAATAACGGCAGGTATTCACGGAATGGAATATCCCGCTATA GCCTCTTTGCTGCAGCTTCGCAGGGAAATAAATCCTCAAAAACTTAAAGGAAATTTAATCATTATTCCCATCATGAACCT GCAGTCCTTCTACCAAAGAACTCCTTTTGTAAACCCCTCTGACAACCTGAACTTAAACCGCGTTTTTCCAGGAAACAAAA CAGGAAGTATCACCGAGGTAATTGCTGATTTTATAACCACTCAGGTTTTTGACGCCACGGACGTGTTTCTGGATCTGCAT GGCGGGGATGTCAATGAAGATCTCATACCCTTTATCTGTTATTACGATAACAAGGAATTCAAAGAGCAGACCCGGCTGGT TTCCCGTCTTAGTGAAAACAGCGGTTTTTCCACCATTGTGAGTTATCCCTATGTCATCGCCGAAGGCCGGCCGGCGATGT ATGCCTTTAAGCAGGCCGTAAGGCTGGGCATCCCGGCGCTAAGCATTGAAATTGGAAAGCTTGGCAACTGCGAGAAGTCA GATGTTTCCTTTACTAAAAATGCAGTTTACCTCATGCTCAAAGAGCTGCAAATGTATGAAAGCAAAAAAGTGATACCAGG TGCTCCTGCAAAAAACAAATATAACAGGCAGGCCTACGTTCCAGGACCCGGCCAGGGATTATTTTACAGCAGTTTTAAAG CAGGAAGCAGAGTTATAAAAGAAGAGGAAATTGGCTATATCACAGATGTTTTTGGCCGTAATGTGAAAATAATCACCGCG CCCCAAAGCGGCACAATTCTCTATAAGGCAGGAAGACTGCCGGTAAACGAAGGCGAAACATTATTCTGTATCGGCTATAA GGCTGTGAATTAA
Upstream 100 bases:
>100_bases TGTTTTTCTCCCTGCAGCAAATTGAATCCCGGGCTATTATTTTGAATTTAAATCAACTAAAAAATAACCTATTAAGCGCC ATAGTCGCTTTAAGATACGC
Downstream 100 bases:
>100_bases TTTTATATCAATACCGAAAGCTCCAAGATCATGCCGCTTTGAAAAGTTTTTATCTTCATGAACAATACTGCCTGCTGTCA GCCGTTTACAATAGTTCGGT
Product: succinylglutamate desuccinylase/aspartoacylase
Products: NA
Alternate protein names: Ectoine Utilization Protein EutE; Succinylglutamate Desuccinylase / Aspartoacylase Family; Deacylase; Succinylglutamate Desuccinylase/Aspartoacylase Family; Succinate Dehydrogenase Subunit; Deacylase-Like; Succinylglutamate Desuccinylase; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKNLLFFLFSILIFQTAQSQKNSLKKILVLQQPGIKDTIFHLSTLDSIRADLPATLIKGSQSGPTFTITAGIHGMEYPAI ASLLQLRREINPQKLKGNLIIIPIMNLQSFYQRTPFVNPSDNLNLNRVFPGNKTGSITEVIADFITTQVFDATDVFLDLH GGDVNEDLIPFICYYDNKEFKEQTRLVSRLSENSGFSTIVSYPYVIAEGRPAMYAFKQAVRLGIPALSIEIGKLGNCEKS DVSFTKNAVYLMLKELQMYESKKVIPGAPAKNKYNRQAYVPGPGQGLFYSSFKAGSRVIKEEEIGYITDVFGRNVKIITA PQSGTILYKAGRLPVNEGETLFCIGYKAVN
Sequences:
>Translated_350_residues MKNLLFFLFSILIFQTAQSQKNSLKKILVLQQPGIKDTIFHLSTLDSIRADLPATLIKGSQSGPTFTITAGIHGMEYPAI ASLLQLRREINPQKLKGNLIIIPIMNLQSFYQRTPFVNPSDNLNLNRVFPGNKTGSITEVIADFITTQVFDATDVFLDLH GGDVNEDLIPFICYYDNKEFKEQTRLVSRLSENSGFSTIVSYPYVIAEGRPAMYAFKQAVRLGIPALSIEIGKLGNCEKS DVSFTKNAVYLMLKELQMYESKKVIPGAPAKNKYNRQAYVPGPGQGLFYSSFKAGSRVIKEEEIGYITDVFGRNVKIITA PQSGTILYKAGRLPVNEGETLFCIGYKAVN >Mature_350_residues MKNLLFFLFSILIFQTAQSQKNSLKKILVLQQPGIKDTIFHLSTLDSIRADLPATLIKGSQSGPTFTITAGIHGMEYPAI ASLLQLRREINPQKLKGNLIIIPIMNLQSFYQRTPFVNPSDNLNLNRVFPGNKTGSITEVIADFITTQVFDATDVFLDLH GGDVNEDLIPFICYYDNKEFKEQTRLVSRLSENSGFSTIVSYPYVIAEGRPAMYAFKQAVRLGIPALSIEIGKLGNCEKS DVSFTKNAVYLMLKELQMYESKKVIPGAPAKNKYNRQAYVPGPGQGLFYSSFKAGSRVIKEEEIGYITDVFGRNVKIITA PQSGTILYKAGRLPVNEGETLFCIGYKAVN
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38949; Mature: 38949
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLFFLFSILIFQTAQSQKNSLKKILVLQQPGIKDTIFHLSTLDSIRADLPATLIKGS CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCCC QSGPTFTITAGIHGMEYPAIASLLQLRREINPQKLKGNLIIIPIMNLQSFYQRTPFVNPS CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCCCEEEEECCCHHHHHHHCCCCCCC DNLNLNRVFPGNKTGSITEVIADFITTQVFDATDVFLDLHGGDVNEDLIPFICYYDNKEF CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCHHH KEQTRLVSRLSENSGFSTIVSYPYVIAEGRPAMYAFKQAVRLGIPALSIEIGKLGNCEKS HHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC DVSFTKNAVYLMLKELQMYESKKVIPGAPAKNKYNRQAYVPGPGQGLFYSSFKAGSRVIK CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEECCHHHCHHHHH EEEIGYITDVFGRNVKIITAPQSGTILYKAGRLPVNEGETLFCIGYKAVN HHCCCHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MKNLLFFLFSILIFQTAQSQKNSLKKILVLQQPGIKDTIFHLSTLDSIRADLPATLIKGS CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHCCC QSGPTFTITAGIHGMEYPAIASLLQLRREINPQKLKGNLIIIPIMNLQSFYQRTPFVNPS CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCCCEEEEECCCHHHHHHHCCCCCCC DNLNLNRVFPGNKTGSITEVIADFITTQVFDATDVFLDLHGGDVNEDLIPFICYYDNKEF CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCHHH KEQTRLVSRLSENSGFSTIVSYPYVIAEGRPAMYAFKQAVRLGIPALSIEIGKLGNCEKS HHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC DVSFTKNAVYLMLKELQMYESKKVIPGAPAKNKYNRQAYVPGPGQGLFYSSFKAGSRVIK CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEECCHHHCHHHHH EEEIGYITDVFGRNVKIITAPQSGTILYKAGRLPVNEGETLFCIGYKAVN HHCCCHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA