| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302061
Identifier: 146302061
GI number: 146302061
Start: 5223994
End: 5224908
Strand: Direct
Name: 146302061
Synonym: Fjoh_4325
Alternate gene names: NA
Gene position: 5223994-5224908 (Clockwise)
Preceding gene: 146302059
Following gene: 146302068
Centisome position: 85.68
GC content: 35.3
Gene sequence:
>915_bases ATGAAAAAATTAGTTTATTTTTTGATAATTCCCCTTTCCTATTTTTCGGCTCAAGCGCAAACTACTGCCGAAATAACTAA AGAAAATACTTTAACTGAAACTCAAAACGACGACAGAAAAATTCAGGATTATCAGCCTGATGATCTGCCGTGGCACGGAA GAAGGTTTAAAGCTACAGCAGGTGCTTTTTTTCCTGTAAACAATACCGAAGTTGAAGTGAATGGAACAAACGGCAGAATT GGAACTGATATTGATTTTGAACGTGATTTAGGTTTTCAAAACAATACGGTTTCCTTTTTTGGAACTTTTGAATGGCGTGC TTCCCGCAGATCCCGTTTTAATCTGGAATATTTTTATTTAAAAAGAAATTCAACAAAAACGCTTCAAAAAGAAATTGAAT TTAAAGATCATGTGTATCCTGTTAACGCCGAGGTTGCGGCTTTTATGGATAATCAGATGATTCGGTTTGCTTATGGATAT GCTATTGTTTCTAAACCGAAATATGAACTGGGTTTATTAATAGGTGCTCACATAATGCTTGCCGATGTTGGAATTGGACT GGCAGGAAACACAATACAGGCACAATATAGAGACAACGTTGATTTTACTGCTCCGCTGCCTGATATTGGAATCTGGGGCG AATTTGTACTCGGAAGAAAAGTGGGTTTATATGCCAACCTAAATTATTTTGCCTTAAAAATAGATGATATAGACGGCCGA ATTGTGAGTTATAATTTATCGGTTTTGTATAATGTATATCAAAATTTTAGTTTAACTGCCGGATACACCGGATTAAATTT TAGAGTTGATGTTGCCAGACCAAAAATTGACGGTTTTTTTAAATGGGGTTATAACGGACCAACTATTGCTGCAACATATA GTTTTGGAAATCATGTGAAGTTTTATAAACACTAA
Upstream 100 bases:
>100_bases TGAATATCAAAATAATAAACCAGTACAAAATTAATTTGAATGATTTTTTTTGTTAACTTTAATTGTTAAAATTTCATTAA TAAACCTAAACATCAATCTC
Downstream 100 bases:
>100_bases AAAAAATTAATGGTGAATTGTGAATTGTGAATTATATGATGAAACTTCAAAATTAGATATGAATATATGCCGCTCCTACG GAGCTTTTATTATCTACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKKLVYFLIIPLSYFSAQAQTTAEITKENTLTETQNDDRKIQDYQPDDLPWHGRRFKATAGAFFPVNNTEVEVNGTNGRI GTDIDFERDLGFQNNTVSFFGTFEWRASRRSRFNLEYFYLKRNSTKTLQKEIEFKDHVYPVNAEVAAFMDNQMIRFAYGY AIVSKPKYELGLLIGAHIMLADVGIGLAGNTIQAQYRDNVDFTAPLPDIGIWGEFVLGRKVGLYANLNYFALKIDDIDGR IVSYNLSVLYNVYQNFSLTAGYTGLNFRVDVARPKIDGFFKWGYNGPTIAATYSFGNHVKFYKH
Sequences:
>Translated_304_residues MKKLVYFLIIPLSYFSAQAQTTAEITKENTLTETQNDDRKIQDYQPDDLPWHGRRFKATAGAFFPVNNTEVEVNGTNGRI GTDIDFERDLGFQNNTVSFFGTFEWRASRRSRFNLEYFYLKRNSTKTLQKEIEFKDHVYPVNAEVAAFMDNQMIRFAYGY AIVSKPKYELGLLIGAHIMLADVGIGLAGNTIQAQYRDNVDFTAPLPDIGIWGEFVLGRKVGLYANLNYFALKIDDIDGR IVSYNLSVLYNVYQNFSLTAGYTGLNFRVDVARPKIDGFFKWGYNGPTIAATYSFGNHVKFYKH >Mature_304_residues MKKLVYFLIIPLSYFSAQAQTTAEITKENTLTETQNDDRKIQDYQPDDLPWHGRRFKATAGAFFPVNNTEVEVNGTNGRI GTDIDFERDLGFQNNTVSFFGTFEWRASRRSRFNLEYFYLKRNSTKTLQKEIEFKDHVYPVNAEVAAFMDNQMIRFAYGY AIVSKPKYELGLLIGAHIMLADVGIGLAGNTIQAQYRDNVDFTAPLPDIGIWGEFVLGRKVGLYANLNYFALKIDDIDGR IVSYNLSVLYNVYQNFSLTAGYTGLNFRVDVARPKIDGFFKWGYNGPTIAATYSFGNHVKFYKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34774; Mature: 34774
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVYFLIIPLSYFSAQAQTTAEITKENTLTETQNDDRKIQDYQPDDLPWHGRRFKATA CCCEEEEEEEEHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC GAFFPVNNTEVEVNGTNGRIGTDIDFERDLGFQNNTVSFFGTFEWRASRRSRFNLEYFYL CEEEECCCCEEEEECCCCEECCCCCCHHCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEE KRNSTKTLQKEIEFKDHVYPVNAEVAAFMDNQMIRFAYGYAIVSKPKYELGLLIGAHIML ECCCCHHHHHHCCCCCCEEECCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEECCEEEE ADVGIGLAGNTIQAQYRDNVDFTAPLPDIGIWGEFVLGRKVGLYANLNYFALKIDDIDGR EECCCCCCCCEEEEEECCCCEEECCCCCCCCCCCEEECCEEEEEEECEEEEEEEECCCCE IVSYNLSVLYNVYQNFSLTAGYTGLNFRVDVARPKIDGFFKWGYNGPTIAATYSFGNHVK EEEEEHHEEEEHHHCCEEEECCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCEEE FYKH EEEC >Mature Secondary Structure MKKLVYFLIIPLSYFSAQAQTTAEITKENTLTETQNDDRKIQDYQPDDLPWHGRRFKATA CCCEEEEEEEEHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC GAFFPVNNTEVEVNGTNGRIGTDIDFERDLGFQNNTVSFFGTFEWRASRRSRFNLEYFYL CEEEECCCCEEEEECCCCEECCCCCCHHCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEE KRNSTKTLQKEIEFKDHVYPVNAEVAAFMDNQMIRFAYGYAIVSKPKYELGLLIGAHIML ECCCCHHHHHHCCCCCCEEECCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEECCEEEE ADVGIGLAGNTIQAQYRDNVDFTAPLPDIGIWGEFVLGRKVGLYANLNYFALKIDDIDGR EECCCCCCCCEEEEEECCCCEEECCCCCCCCCCCEEECCEEEEEEECEEEEEEEECCCCE IVSYNLSVLYNVYQNFSLTAGYTGLNFRVDVARPKIDGFFKWGYNGPTIAATYSFGNHVK EEEEEHHEEEEHHHCCEEEECCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCEEE FYKH EEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA