Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302054

Identifier: 146302054

GI number: 146302054

Start: 5216904

End: 5217395

Strand: Direct

Name: 146302054

Synonym: Fjoh_4318

Alternate gene names: NA

Gene position: 5216904-5217395 (Clockwise)

Preceding gene: 146302053

Following gene: 146302055

Centisome position: 85.57

GC content: 36.99

Gene sequence:

>492_bases
ATGAAAAAGAAGAAACAAAATGGCGGAAGTGCATTTGAAAAATTTGCTTCAAAAGTTTCAAAAGCGGCCGGAAGCACTAC
TGCTTTTATAGGCGCTTTTGTTATTGTGGTTGCCTGGGCAGTTTCAGGACCTATTTTCAATTATTCTGAAACCTGGCAAT
TGGTTATCAATACCGGAACCACGATTATTACTTTTTTGATGGTTTTTCTAATTCAGAAAGCCCAGAATAAAGATTCTCTG
GCCATTCAATTAAAACTGAACGAATTGGTAGCTTCAGGCGAGCGCTCAAGCAATAGTCTGGTTGATATTGAAAATATGAC
AGAAGAAGAAATGGTTATCATTCAAAAATATTATCATCGTTTAGCTGAGCTGGCTAAAAAAGATGAAAGCATTAGAACCT
CACACTCTGTTGCCGAAGCACATTCGCAGCATGAGTACAAAGATAAAAACAGAACCAAACATCGTACTGCACGAAATACA
GATAAAAAATGA

Upstream 100 bases:

>100_bases
AAAACAGGCCAAAAAATTATTGGAGCGGTTTACGACGAAAAGAATAACAAAGTGGTAAAAAAAGAAAAAGTAAGCAAAAA
GAAATCCTAATTAAAATGCA

Downstream 100 bases:

>100_bases
AATTACGTTCGACAGAAACCTTTTGGCCTTTAAAAAATGCCATGAATATCAGTTATCCCTCAATTGATGCCGATATTAAA
ACCGAAATTTTAATTATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKKKKQNGGSAFEKFASKVSKAAGSTTAFIGAFVIVVAWAVSGPIFNYSETWQLVINTGTTIITFLMVFLIQKAQNKDSL
AIQLKLNELVASGERSSNSLVDIENMTEEEMVIIQKYYHRLAELAKKDESIRTSHSVAEAHSQHEYKDKNRTKHRTARNT
DKK

Sequences:

>Translated_163_residues
MKKKKQNGGSAFEKFASKVSKAAGSTTAFIGAFVIVVAWAVSGPIFNYSETWQLVINTGTTIITFLMVFLIQKAQNKDSL
AIQLKLNELVASGERSSNSLVDIENMTEEEMVIIQKYYHRLAELAKKDESIRTSHSVAEAHSQHEYKDKNRTKHRTARNT
DKK
>Mature_163_residues
MKKKKQNGGSAFEKFASKVSKAAGSTTAFIGAFVIVVAWAVSGPIFNYSETWQLVINTGTTIITFLMVFLIQKAQNKDSL
AIQLKLNELVASGERSSNSLVDIENMTEEEMVIIQKYYHRLAELAKKDESIRTSHSVAEAHSQHEYKDKNRTKHRTARNT
DKK

Specific function: Unknown

COG id: COG5478

COG function: function code S; Predicted small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18310; Mature: 18310

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKKQNGGSAFEKFASKVSKAAGSTTAFIGAFVIVVAWAVSGPIFNYSETWQLVINTGT
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCH
TIITFLMVFLIQKAQNKDSLAIQLKLNELVASGERSSNSLVDIENMTEEEMVIIQKYYHR
HHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCCCEEEHHHCCHHHHHHHHHHHHH
LAELAKKDESIRTSHSVAEAHSQHEYKDKNRTKHRTARNTDKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKKKQNGGSAFEKFASKVSKAAGSTTAFIGAFVIVVAWAVSGPIFNYSETWQLVINTGT
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCH
TIITFLMVFLIQKAQNKDSLAIQLKLNELVASGERSSNSLVDIENMTEEEMVIIQKYYHR
HHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCCCEEEHHHCCHHHHHHHHHHHHH
LAELAKKDESIRTSHSVAEAHSQHEYKDKNRTKHRTARNTDKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA