Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302053

Identifier: 146302053

GI number: 146302053

Start: 5214074

End: 5216893

Strand: Direct

Name: 146302053

Synonym: Fjoh_4317

Alternate gene names: NA

Gene position: 5214074-5216893 (Clockwise)

Preceding gene: 146302052

Following gene: 146302054

Centisome position: 85.52

GC content: 34.36

Gene sequence:

>2820_bases
ATGAAAACTTCATATAAAAATATAAGCCTTAAAATACTCAAATGGACAGGAATAGTAATAGCGGGAATACTGCTGTTACT
TTTTTTGATTCCGCTGTTATTTCCCGGAAAAGTAGCCTCAGAAGTTAAAAAAATTGCAAACGAACGTTTAGATACCAAAT
TAGAATTTTCGAAGTCTAAACTTTCATTTTTTACCCATTTCCCTTCATTGACTGTCTCACTTGACGATATCTCTATGACG
GGTTCAAAACCATTTGGAAATGATACTTTATTAAAAGCAGATCAGGTGGCTTTTGGAATAAACCTGAAAAGACTCATTTT
TGACAGCGAAGTTAAAATCAATAAATTATACGTTTCAAACGCATTAATTAATGTAATGGTCAACGAAAAAGGACAAGCTA
ATTATAATATTTATGTAGCACCCGAAGACCGAAAAAACGAAAAAGAAGATCCAAATGCTCCCGAAGAAGGAACAGCAATA
AAATTAGAACGAATTGATTTAGAAAACTGCCATGTAAAATACAACGACCGATCTGCTAAAGTTTTAGTCGATGCCAAAGG
TTTCAATTACATTGGAAAAGGAAACCTGAGCGATGATATTTTCGATTTAAATACCGATGCCAAAATCGATACGCTGGATT
TCTACTATAACCGAACTGCATATCTAAGAAAAAAAGCCGTTCGTGCTGATTTAATTACCAGAATCAATACGCACGCACTT
TCATTCATTCTTCAAAAAAATGAACTACAGATTAACAAACTGCCTTTAAAGTTTACCGGTCTATTTACCATTTTAAGAGA
CGGGTATAAAATCAATATCAAAGCAGCATCAGAAAACACAACCGTAAAAGATTTACTTTCTGTTATGCCTCCGGAATATT
TAACCTGGCTGGAAAAAACCGAAATTTCAGGAAAAAGTGATTTGGTGCTTTCTTTTAAAGGAGATTATAATGTTTCGAAA
AAACAAAAACCCAATTTAGCTTTCAACCTAAAGATAAAAGACGGAGCCGTTAGTTATCAAAATGCGCCCGTTCCGCTTAC
CGATTTCCAAATGGATTTAAATGCCATGCTGCCTTCTCTTGATACCGAACAATTATTGGTAAACCTTAGAACTTTACGAT
TTAAAGTAGGCGAAAAAGATTATTTCAACGCTTATCTGCATAGTAAAGGTTTAAGCGAAATGAATGTAGATGCCAGTATA
AAAGGTGCTTTGGATCTGGCTGTTGTAGACGCTGCAATTGGTTTGGAAAAAATTGATTTAAAAGGAATTTTAAAAACCAA
TATTCAGGCAAAAGGGCTTTTCAGCACCTCAAAAAAACTTTTTCCTAAAACAATCGGCGGTATTTCGCTTCGAAACGGAT
GGCTGAAAACAGACTACTACCCTAACCCAATTAAAGATATAACTTTTGTAGCCAACGTGCTTAATAAAGCCGGAACTTAT
GAGGATCTAATTGTGGCTGTTTCTCCCGCTTCTTTTGTTTTTGAAGGAAATCCGATGTATGTAAATATGGCATTATCAGA
TTTCAGCGATCTGGCTTATAATGCTAAAATTAAAGGAGAACTCAATGTGGGTAGAATATACCAGGTATTTTCACAAAAAG
GTCTTGATGTAACCGGTTATGCAAAAGCCGATTTATCTCTTAAAGGAAAACAAAGCTACGCCACGACGGGACAATATAGC
AAACTGGATAATCGAGGCACAATTCTGCTTAAAAATATCAAAGCTACTTCAGAATTATTCCCAAAAGCTTTTTTTATAAA
ACAAGGAAACTTCCGTTTTCAGAACGAGAAAATGTGGTTTGAAAAATTCTATGCTTCTTACGGAAAATCTGATTTTGATA
TTAACGGATATCTTTTAAATACTATAAATTATTTTCTGGAATCGCACGGAACTCTAAGCGGTGACTTTAATATGAAATCT
AAACTCATCAATGTAGATGAATTTATGGCGCTTGAAAAAGGTGAAAATAAAGACCGAAAACTCGAAGTTGATTATGCCAA
AGAAGACCATCCAAAAATGAGCGGTGTAGTAATGATTCCTAAAAACTTAAATGTTTCGCTTACTGCAAATGCCGATAAAG
TAGAATATAACGGATTGAACCTAAACAAACTTTCAGGAAAAGTGGGCATTACAAAAGGTAGTTTCTATTTAGAAAATACT
TCTTTAAATATTATTGACTGTATTCTTGGAGTTAATGCGGCATATAAAGACGAATCACCGACTTCTGCACATTTTGACGC
ACATTTCACTGCAAAAGATTTCAGTGTTCAGCGTGCTTACAAAGAAATTCCGATGTTTCATGATATGGTAACTGTTGCCG
AAAAAGCACAGGGAATTATTTCTGTTGATTACAAAATAAAAGGTGATTTAAACGGAAATATGGGGCCAATTTACGAATCG
CTTGAAGGAGGCGGAACAATCAATCTTCGTGATGTAAAAATTAAAGGTTTAAAATTATTTGAAGGCGTGAGTTCGCAAAC
CGGACAAAAAGGTTTGGATGATCCAAAAATGGAAGGAATCGAAATAAAATCGAATATTAATAATAATCTTATTTCTATAG
AGCCTTTTACGTTTAGTGTAGCAAGTTTTAGACCCACAATTAAAGGAACCACAAGTTTTGACGGTCTTTTAGATTTAAGA
ATGCGTTTAGGATTGCCGCCGGGCGGTATTATTGGTTTTCCAATCGTAATTACCGGAACGCACGAAAATCCTAAAATTAA
AATTTTCAGTAAAACAGGCCAAAAAATTATTGGAGCGGTTTACGACGAAAAGAATAACAAAGTGGTAAAAAAAGAAAAAG
TAAGCAAAAAGAAATCCTAA

Upstream 100 bases:

>100_bases
AGAAAAAGAAAAACAGGAAAAAGCCAAAGAAGAGAAAGAAAAGCAAAAAGCCGAAGAAGCTAAGAAAGAGGCTGAAAAGA
AATAATTAAAACTCTGCGCC

Downstream 100 bases:

>100_bases
TTAAAATGCAATGAAAAAGAAGAAACAAAATGGCGGAAGTGCATTTGAAAAATTTGCTTCAAAAGTTTCAAAAGCGGCCG
GAAGCACTACTGCTTTTATA

Product: AsmA family protein

Products: NA

Alternate protein names: Outer Membrane Assembly Protein; Outer Membrane Protein; Asma Family Protein

Number of amino acids: Translated: 939; Mature: 939

Protein sequence:

>939_residues
MKTSYKNISLKILKWTGIVIAGILLLLFLIPLLFPGKVASEVKKIANERLDTKLEFSKSKLSFFTHFPSLTVSLDDISMT
GSKPFGNDTLLKADQVAFGINLKRLIFDSEVKINKLYVSNALINVMVNEKGQANYNIYVAPEDRKNEKEDPNAPEEGTAI
KLERIDLENCHVKYNDRSAKVLVDAKGFNYIGKGNLSDDIFDLNTDAKIDTLDFYYNRTAYLRKKAVRADLITRINTHAL
SFILQKNELQINKLPLKFTGLFTILRDGYKINIKAASENTTVKDLLSVMPPEYLTWLEKTEISGKSDLVLSFKGDYNVSK
KQKPNLAFNLKIKDGAVSYQNAPVPLTDFQMDLNAMLPSLDTEQLLVNLRTLRFKVGEKDYFNAYLHSKGLSEMNVDASI
KGALDLAVVDAAIGLEKIDLKGILKTNIQAKGLFSTSKKLFPKTIGGISLRNGWLKTDYYPNPIKDITFVANVLNKAGTY
EDLIVAVSPASFVFEGNPMYVNMALSDFSDLAYNAKIKGELNVGRIYQVFSQKGLDVTGYAKADLSLKGKQSYATTGQYS
KLDNRGTILLKNIKATSELFPKAFFIKQGNFRFQNEKMWFEKFYASYGKSDFDINGYLLNTINYFLESHGTLSGDFNMKS
KLINVDEFMALEKGENKDRKLEVDYAKEDHPKMSGVVMIPKNLNVSLTANADKVEYNGLNLNKLSGKVGITKGSFYLENT
SLNIIDCILGVNAAYKDESPTSAHFDAHFTAKDFSVQRAYKEIPMFHDMVTVAEKAQGIISVDYKIKGDLNGNMGPIYES
LEGGGTINLRDVKIKGLKLFEGVSSQTGQKGLDDPKMEGIEIKSNINNNLISIEPFTFSVASFRPTIKGTTSFDGLLDLR
MRLGLPPGGIIGFPIVITGTHENPKIKIFSKTGQKIIGAVYDEKNNKVVKKEKVSKKKS

Sequences:

>Translated_939_residues
MKTSYKNISLKILKWTGIVIAGILLLLFLIPLLFPGKVASEVKKIANERLDTKLEFSKSKLSFFTHFPSLTVSLDDISMT
GSKPFGNDTLLKADQVAFGINLKRLIFDSEVKINKLYVSNALINVMVNEKGQANYNIYVAPEDRKNEKEDPNAPEEGTAI
KLERIDLENCHVKYNDRSAKVLVDAKGFNYIGKGNLSDDIFDLNTDAKIDTLDFYYNRTAYLRKKAVRADLITRINTHAL
SFILQKNELQINKLPLKFTGLFTILRDGYKINIKAASENTTVKDLLSVMPPEYLTWLEKTEISGKSDLVLSFKGDYNVSK
KQKPNLAFNLKIKDGAVSYQNAPVPLTDFQMDLNAMLPSLDTEQLLVNLRTLRFKVGEKDYFNAYLHSKGLSEMNVDASI
KGALDLAVVDAAIGLEKIDLKGILKTNIQAKGLFSTSKKLFPKTIGGISLRNGWLKTDYYPNPIKDITFVANVLNKAGTY
EDLIVAVSPASFVFEGNPMYVNMALSDFSDLAYNAKIKGELNVGRIYQVFSQKGLDVTGYAKADLSLKGKQSYATTGQYS
KLDNRGTILLKNIKATSELFPKAFFIKQGNFRFQNEKMWFEKFYASYGKSDFDINGYLLNTINYFLESHGTLSGDFNMKS
KLINVDEFMALEKGENKDRKLEVDYAKEDHPKMSGVVMIPKNLNVSLTANADKVEYNGLNLNKLSGKVGITKGSFYLENT
SLNIIDCILGVNAAYKDESPTSAHFDAHFTAKDFSVQRAYKEIPMFHDMVTVAEKAQGIISVDYKIKGDLNGNMGPIYES
LEGGGTINLRDVKIKGLKLFEGVSSQTGQKGLDDPKMEGIEIKSNINNNLISIEPFTFSVASFRPTIKGTTSFDGLLDLR
MRLGLPPGGIIGFPIVITGTHENPKIKIFSKTGQKIIGAVYDEKNNKVVKKEKVSKKKS
>Mature_939_residues
MKTSYKNISLKILKWTGIVIAGILLLLFLIPLLFPGKVASEVKKIANERLDTKLEFSKSKLSFFTHFPSLTVSLDDISMT
GSKPFGNDTLLKADQVAFGINLKRLIFDSEVKINKLYVSNALINVMVNEKGQANYNIYVAPEDRKNEKEDPNAPEEGTAI
KLERIDLENCHVKYNDRSAKVLVDAKGFNYIGKGNLSDDIFDLNTDAKIDTLDFYYNRTAYLRKKAVRADLITRINTHAL
SFILQKNELQINKLPLKFTGLFTILRDGYKINIKAASENTTVKDLLSVMPPEYLTWLEKTEISGKSDLVLSFKGDYNVSK
KQKPNLAFNLKIKDGAVSYQNAPVPLTDFQMDLNAMLPSLDTEQLLVNLRTLRFKVGEKDYFNAYLHSKGLSEMNVDASI
KGALDLAVVDAAIGLEKIDLKGILKTNIQAKGLFSTSKKLFPKTIGGISLRNGWLKTDYYPNPIKDITFVANVLNKAGTY
EDLIVAVSPASFVFEGNPMYVNMALSDFSDLAYNAKIKGELNVGRIYQVFSQKGLDVTGYAKADLSLKGKQSYATTGQYS
KLDNRGTILLKNIKATSELFPKAFFIKQGNFRFQNEKMWFEKFYASYGKSDFDINGYLLNTINYFLESHGTLSGDFNMKS
KLINVDEFMALEKGENKDRKLEVDYAKEDHPKMSGVVMIPKNLNVSLTANADKVEYNGLNLNKLSGKVGITKGSFYLENT
SLNIIDCILGVNAAYKDESPTSAHFDAHFTAKDFSVQRAYKEIPMFHDMVTVAEKAQGIISVDYKIKGDLNGNMGPIYES
LEGGGTINLRDVKIKGLKLFEGVSSQTGQKGLDDPKMEGIEIKSNINNNLISIEPFTFSVASFRPTIKGTTSFDGLLDLR
MRLGLPPGGIIGFPIVITGTHENPKIKIFSKTGQKIIGAVYDEKNNKVVKKEKVSKKKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104711; Mature: 104711

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSYKNISLKILKWTGIVIAGILLLLFLIPLLFPGKVASEVKKIANERLDTKLEFSKSK
CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECHHH
LSFFTHFPSLTVSLDDISMTGSKPFGNDTLLKADQVAFGINLKRLIFDSEVKINKLYVSN
EEEEEECCCEEEEEECEEECCCCCCCCCCEEEECCEEECCCEEEEEECCCCEEEEEEEEC
ALINVMVNEKGQANYNIYVAPEDRKNEKEDPNAPEEGTAIKLERIDLENCHVKYNDRSAK
EEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCEE
VLVDAKGFNYIGKGNLSDDIFDLNTDAKIDTLDFYYNRTAYLRKKAVRADLITRINTHAL
EEEEECCCCEEECCCCCCCEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHE
SFILQKNELQINKLPLKFTGLFTILRDGYKINIKAASENTTVKDLLSVMPPEYLTWLEKT
EEEEECCCEEEEECCEEHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHH
EISGKSDLVLSFKGDYNVSKKQKPNLAFNLKIKDGAVSYQNAPVPLTDFQMDLNAMLPSL
CCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCEEECCCCCCCHHHHHEEHHHHCCCC
DTEQLLVNLRTLRFKVGEKDYFNAYLHSKGLSEMNVDASIKGALDLAVVDAAIGLEKIDL
CHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEECCCEEEEEEHHHCCCEEECC
KGILKTNIQAKGLFSTSKKLFPKTIGGISLRNGWLKTDYYPNPIKDITFVANVLNKAGTY
CCCEECCCEECEEECCCHHHCHHHCCCCEECCCEEECCCCCCCHHHHHHHHHHHHHCCCC
EDLIVAVSPASFVFEGNPMYVNMALSDFSDLAYNAKIKGELNVGRIYQVFSQKGLDVTGY
CEEEEEECCCEEEEECCCEEEEEEECCCCCCEECEEEECCCCHHHHHHHHHHCCCCEEEE
AKADLSLKGKQSYATTGQYSKLDNRGTILLKNIKATSELFPKAFFIKQGNFRFQNEKMWF
EEECEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCEEEEEECCCEEEECCHHHH
EKFYASYGKSDFDINGYLLNTINYFLESHGTLSGDFNMKSKLINVDEFMALEKGENKDRK
HHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCHHEEECHHHHHHCCCCCCCCCE
LEVDYAKEDHPKMSGVVMIPKNLNVSLTANADKVEYNGLNLNKLSGKVGITKGSFYLENT
EEEECCCCCCCCCCCEEEECCCCCEEEEECCCEEEECCCCEEECCCEEEEEECCEEEECC
SLNIIDCILGVNAAYKDESPTSAHFDAHFTAKDFSVQRAYKEIPMFHDMVTVAEKAQGII
CCEEEEHHHCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCHHHHHHHHHHHCCCEE
SVDYKIKGDLNGNMGPIYESLEGGGTINLRDVKIKGLKLFEGVSSQTGQKGLDDPKMEGI
EEEEEEEECCCCCCCHHHHHHCCCCEEEEEEEEEECEEEECCCCCCCCCCCCCCCCCCCE
EIKSNINNNLISIEPFTFSVASFRPTIKGTTSFDGLLDLRMRLGLPPGGIIGFPIVITGT
EEECCCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEEC
HENPKIKIFSKTGQKIIGAVYDEKNNKVVKKEKVSKKKS
CCCCCEEEEECCCCEEEEEEEECCCCCEEHHHHHHCCCC
>Mature Secondary Structure
MKTSYKNISLKILKWTGIVIAGILLLLFLIPLLFPGKVASEVKKIANERLDTKLEFSKSK
CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECHHH
LSFFTHFPSLTVSLDDISMTGSKPFGNDTLLKADQVAFGINLKRLIFDSEVKINKLYVSN
EEEEEECCCEEEEEECEEECCCCCCCCCCEEEECCEEECCCEEEEEECCCCEEEEEEEEC
ALINVMVNEKGQANYNIYVAPEDRKNEKEDPNAPEEGTAIKLERIDLENCHVKYNDRSAK
EEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCEE
VLVDAKGFNYIGKGNLSDDIFDLNTDAKIDTLDFYYNRTAYLRKKAVRADLITRINTHAL
EEEEECCCCEEECCCCCCCEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHE
SFILQKNELQINKLPLKFTGLFTILRDGYKINIKAASENTTVKDLLSVMPPEYLTWLEKT
EEEEECCCEEEEECCEEHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHH
EISGKSDLVLSFKGDYNVSKKQKPNLAFNLKIKDGAVSYQNAPVPLTDFQMDLNAMLPSL
CCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCEEECCCCCCCHHHHHEEHHHHCCCC
DTEQLLVNLRTLRFKVGEKDYFNAYLHSKGLSEMNVDASIKGALDLAVVDAAIGLEKIDL
CHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEECCCEEEEEEHHHCCCEEECC
KGILKTNIQAKGLFSTSKKLFPKTIGGISLRNGWLKTDYYPNPIKDITFVANVLNKAGTY
CCCEECCCEECEEECCCHHHCHHHCCCCEECCCEEECCCCCCCHHHHHHHHHHHHHCCCC
EDLIVAVSPASFVFEGNPMYVNMALSDFSDLAYNAKIKGELNVGRIYQVFSQKGLDVTGY
CEEEEEECCCEEEEECCCEEEEEEECCCCCCEECEEEECCCCHHHHHHHHHHCCCCEEEE
AKADLSLKGKQSYATTGQYSKLDNRGTILLKNIKATSELFPKAFFIKQGNFRFQNEKMWF
EEECEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCEEEEEECCCEEEECCHHHH
EKFYASYGKSDFDINGYLLNTINYFLESHGTLSGDFNMKSKLINVDEFMALEKGENKDRK
HHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCHHEEECHHHHHHCCCCCCCCCE
LEVDYAKEDHPKMSGVVMIPKNLNVSLTANADKVEYNGLNLNKLSGKVGITKGSFYLENT
EEEECCCCCCCCCCCEEEECCCCCEEEEECCCEEEECCCCEEECCCEEEEEECCEEEECC
SLNIIDCILGVNAAYKDESPTSAHFDAHFTAKDFSVQRAYKEIPMFHDMVTVAEKAQGII
CCEEEEHHHCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCHHHHHHHHHHHCCCEE
SVDYKIKGDLNGNMGPIYESLEGGGTINLRDVKIKGLKLFEGVSSQTGQKGLDDPKMEGI
EEEEEEEECCCCCCCHHHHHHCCCCEEEEEEEEEECEEEECCCCCCCCCCCCCCCCCCCE
EIKSNINNNLISIEPFTFSVASFRPTIKGTTSFDGLLDLRMRLGLPPGGIIGFPIVITGT
EEECCCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEEC
HENPKIKIFSKTGQKIIGAVYDEKNNKVVKKEKVSKKKS
CCCCCEEEEECCCCEEEEEEEECCCCCEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA