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The map label for this gene is 146302034

Identifier: 146302034

GI number: 146302034

Start: 5193827

End: 5194420

Strand: Direct

Name: 146302034

Synonym: Fjoh_4298

Alternate gene names: NA

Gene position: 5193827-5194420 (Clockwise)

Preceding gene: 146302032

Following gene: 146302035

Centisome position: 85.19

GC content: 33.84

Gene sequence:

>594_bases
ATGGCTAGCAAAGATCGAATTTTAAGACAAAAAGAAGAAACAAGGAATAATATCCTTGGCGCTGCTTATGATATCGTAAA
AGATGAAGGCTGGAATGGTTTGAGTATGCGTAAAATTGCCGACAGAATCGAATATACTGCTCCTATTATTTATGAATATT
TCTCGAATAAAGAAGCAATATTAGAAGAACTGACAGGCAAAGGTTTTATTAAACTGGCAAAAGAGTTACAGACTGCAAAA
GGCAAGTTTGAAAAACCCGAAGATCAGTTAGAAGCCATGTGGATGACTTACTGGGATTTCGCTTTTACTAATACTGAAAT
GTATCAACTTATGTTTGGTGTTCAAATGACCTGCTGTGCACAGCGATGTTCGGCTCAGGAAGCACCTTACAAATTGTTTA
CTGGTGTTATTGCTGAAATTATGAAAGACAGCAATCCTAGTGAAGATATCATTAAACAAAAATATTTTACTTTCTTTTCT
GTTATTCATGGTTTAATCGCCATCAACATCATTAACAAAAGTGATATTTTAGAAACAATAAATGCCCAGATTTTGAAAGA
TGCTATTACTGGTATCATCAAATCTATACAATAA

Upstream 100 bases:

>100_bases
TATTGCACGATAAGAAAATATTATGATAAAAATATTTTGAAATTCGAAAATCCGCCATACATTTGCCTAACAGTGTTAAA
CGATTTAATACTTGAATACA

Downstream 100 bases:

>100_bases
AAAAATTTTCAATTTTACTTAACAGTGTAAAATGATTTAAACGGGATAATATAAAATCCTTTTTTTTTATAACTTTCGCT
TAACACTGTTAGAAAATTTA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein; TetR-Family Protein Transcriptional Regulator

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MASKDRILRQKEETRNNILGAAYDIVKDEGWNGLSMRKIADRIEYTAPIIYEYFSNKEAILEELTGKGFIKLAKELQTAK
GKFEKPEDQLEAMWMTYWDFAFTNTEMYQLMFGVQMTCCAQRCSAQEAPYKLFTGVIAEIMKDSNPSEDIIKQKYFTFFS
VIHGLIAINIINKSDILETINAQILKDAITGIIKSIQ

Sequences:

>Translated_197_residues
MASKDRILRQKEETRNNILGAAYDIVKDEGWNGLSMRKIADRIEYTAPIIYEYFSNKEAILEELTGKGFIKLAKELQTAK
GKFEKPEDQLEAMWMTYWDFAFTNTEMYQLMFGVQMTCCAQRCSAQEAPYKLFTGVIAEIMKDSNPSEDIIKQKYFTFFS
VIHGLIAINIINKSDILETINAQILKDAITGIIKSIQ
>Mature_196_residues
ASKDRILRQKEETRNNILGAAYDIVKDEGWNGLSMRKIADRIEYTAPIIYEYFSNKEAILEELTGKGFIKLAKELQTAKG
KFEKPEDQLEAMWMTYWDFAFTNTEMYQLMFGVQMTCCAQRCSAQEAPYKLFTGVIAEIMKDSNPSEDIIKQKYFTFFSV
IHGLIAINIINKSDILETINAQILKDAITGIIKSIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22609; Mature: 22478

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKDRILRQKEETRNNILGAAYDIVKDEGWNGLSMRKIADRIEYTAPIIYEYFSNKEAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
LEELTGKGFIKLAKELQTAKGKFEKPEDQLEAMWMTYWDFAFTNTEMYQLMFGVQMTCCA
HHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QRCSAQEAPYKLFTGVIAEIMKDSNPSEDIIKQKYFTFFSVIHGLIAINIINKSDILETI
HHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NAQILKDAITGIIKSIQ
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASKDRILRQKEETRNNILGAAYDIVKDEGWNGLSMRKIADRIEYTAPIIYEYFSNKEAI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
LEELTGKGFIKLAKELQTAKGKFEKPEDQLEAMWMTYWDFAFTNTEMYQLMFGVQMTCCA
HHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QRCSAQEAPYKLFTGVIAEIMKDSNPSEDIIKQKYFTFFSVIHGLIAINIINKSDILETI
HHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NAQILKDAITGIIKSIQ
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA