Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301981

Identifier: 146301981

GI number: 146301981

Start: 5117109

End: 5118275

Strand: Reverse

Name: 146301981

Synonym: Fjoh_4245

Alternate gene names: NA

Gene position: 5118275-5117109 (Counterclockwise)

Preceding gene: 146301982

Following gene: 146301980

Centisome position: 83.95

GC content: 28.45

Gene sequence:

>1167_bases
ATGCAGTATATGAAAACTCCTTCTTCAGAATCTGCTGGTGTTTTAAACGCAATTGGCAACTGTTATTTTAGAAACAAAGA
TTTAGCAAATGCCATGCATTATTTAAATAAATCTGAAGCAATGGCTTTAAAAGTTGGCGACAGTGCAAGATATGCAAAAA
TTTTAGGTGATAAAGCACTCATTTACGAAGAAAAAGGAAATCTAAAAGATGCCGTACATTTATTAAAACAAGATATTTTT
TACTCTCAAAAATTTAAAATTGATAAGAATGAGATGTATGCTTCTATATTATTGGCTAAAATTCTTTTAAAACTAAAAGA
TACCGATAAGGTTGAAGAAATATTAGACAGGGCCGGAAATATTGCGAGTTCAAAATCTTACTACAGAAGTTCTTTAAAAG
AAGTAATTGAATTAAAACTTAGTATTTTAAATGGTAGAAATCCAGAAAAAGAGCTTTTGTTAAGACGTCAGCTTAAACAA
ATTGATGAATATCTTCTTAGTACAAACGGCAATACCGTATTGCAAAGATCGCATTGGCTTATTCAGAAGAAGAAATATGA
AAATGATACTAATAAAATCCGGCTGGAATTAGAGCAGGGAGAAAGAATGAAAAAGATTTATATTCTAATTTTAATCTTAA
CCATTTCATTAAGTATTGTTTTGTACCATTCTTTAAATAAAAAATTAAAAGCAAAAAGAATAAAACTTGAAAATGACAGG
CTGCTTTTTGAACAAAAGCTTAACGATGCCAGTTCAGATATAGATGCGTATACAGAATATCTTGAAAATAAAAATAAACA
GATTTCTATTTTAGAAAATGAGCTTGAAGTAATTAAAACTACAACTTCCAGACATTTAAATGACGAGAAAAGGAAACTTC
AGGAAATGTTAAGCACTCATTTAATGACAGATGAAAATTGGAATGCATTTAAACGAGAGTTTATAAACCAGCATACCGAT
TTTTATAATGCGATAATGGAAAATTTTCCTGAACTAAAAGAATCCAATCTTAAAATAATAATGCTTCAAAAATTAGATTT
TAATAATTATGAAATGTCTAATCTATTGGGTGTTACAATCGATGCTGTCAAAAAAAGCAAACAGCGGTTAAAGAAAAAAT
TAGGGGATAAGTACGATCTGTTGTTTGAAATTATAGATTATAAATAG

Upstream 100 bases:

>100_bases
ATTTTTTTGAAGAGATGTCAGAATATGCAACTGAAATTGGGTTAAAACATTCTTTTGAAGAAGAATCTGCTTGTAGGTAT
TATTTTTTCTCGATAAATCT

Downstream 100 bases:

>100_bases
CCTGCTGTTCATTGCAAATCTTATTTTAATGCACATAGTTTACGAGAAAAATCGTAACTTTTGTTTTTAAAAAGATTCTT
GATTTTAAATATTTATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MQYMKTPSSESAGVLNAIGNCYFRNKDLANAMHYLNKSEAMALKVGDSARYAKILGDKALIYEEKGNLKDAVHLLKQDIF
YSQKFKIDKNEMYASILLAKILLKLKDTDKVEEILDRAGNIASSKSYYRSSLKEVIELKLSILNGRNPEKELLLRRQLKQ
IDEYLLSTNGNTVLQRSHWLIQKKKYENDTNKIRLELEQGERMKKIYILILILTISLSIVLYHSLNKKLKAKRIKLENDR
LLFEQKLNDASSDIDAYTEYLENKNKQISILENELEVIKTTTSRHLNDEKRKLQEMLSTHLMTDENWNAFKREFINQHTD
FYNAIMENFPELKESNLKIIMLQKLDFNNYEMSNLLGVTIDAVKKSKQRLKKKLGDKYDLLFEIIDYK

Sequences:

>Translated_388_residues
MQYMKTPSSESAGVLNAIGNCYFRNKDLANAMHYLNKSEAMALKVGDSARYAKILGDKALIYEEKGNLKDAVHLLKQDIF
YSQKFKIDKNEMYASILLAKILLKLKDTDKVEEILDRAGNIASSKSYYRSSLKEVIELKLSILNGRNPEKELLLRRQLKQ
IDEYLLSTNGNTVLQRSHWLIQKKKYENDTNKIRLELEQGERMKKIYILILILTISLSIVLYHSLNKKLKAKRIKLENDR
LLFEQKLNDASSDIDAYTEYLENKNKQISILENELEVIKTTTSRHLNDEKRKLQEMLSTHLMTDENWNAFKREFINQHTD
FYNAIMENFPELKESNLKIIMLQKLDFNNYEMSNLLGVTIDAVKKSKQRLKKKLGDKYDLLFEIIDYK
>Mature_388_residues
MQYMKTPSSESAGVLNAIGNCYFRNKDLANAMHYLNKSEAMALKVGDSARYAKILGDKALIYEEKGNLKDAVHLLKQDIF
YSQKFKIDKNEMYASILLAKILLKLKDTDKVEEILDRAGNIASSKSYYRSSLKEVIELKLSILNGRNPEKELLLRRQLKQ
IDEYLLSTNGNTVLQRSHWLIQKKKYENDTNKIRLELEQGERMKKIYILILILTISLSIVLYHSLNKKLKAKRIKLENDR
LLFEQKLNDASSDIDAYTEYLENKNKQISILENELEVIKTTTSRHLNDEKRKLQEMLSTHLMTDENWNAFKREFINQHTD
FYNAIMENFPELKESNLKIIMLQKLDFNNYEMSNLLGVTIDAVKKSKQRLKKKLGDKYDLLFEIIDYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45455; Mature: 45455

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYMKTPSSESAGVLNAIGNCYFRNKDLANAMHYLNKSEAMALKVGDSARYAKILGDKAL
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCEE
IYEEKGNLKDAVHLLKQDIFYSQKFKIDKNEMYASILLAKILLKLKDTDKVEEILDRAGN
EEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
IASSKSYYRSSLKEVIELKLSILNGRNPEKELLLRRQLKQIDEYLLSTNGNTVLQRSHWL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
IQKKKYENDTNKIRLELEQGERMKKIYILILILTISLSIVLYHSLNKKLKAKRIKLENDR
HHHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCH
LLFEQKLNDASSDIDAYTEYLENKNKQISILENELEVIKTTTSRHLNDEKRKLQEMLSTH
HHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LMTDENWNAFKREFINQHTDFYNAIMENFPELKESNLKIIMLQKLDFNNYEMSNLLGVTI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH
DAVKKSKQRLKKKLGDKYDLLFEIIDYK
HHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MQYMKTPSSESAGVLNAIGNCYFRNKDLANAMHYLNKSEAMALKVGDSARYAKILGDKAL
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCEE
IYEEKGNLKDAVHLLKQDIFYSQKFKIDKNEMYASILLAKILLKLKDTDKVEEILDRAGN
EEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
IASSKSYYRSSLKEVIELKLSILNGRNPEKELLLRRQLKQIDEYLLSTNGNTVLQRSHWL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
IQKKKYENDTNKIRLELEQGERMKKIYILILILTISLSIVLYHSLNKKLKAKRIKLENDR
HHHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCH
LLFEQKLNDASSDIDAYTEYLENKNKQISILENELEVIKTTTSRHLNDEKRKLQEMLSTH
HHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LMTDENWNAFKREFINQHTDFYNAIMENFPELKESNLKIIMLQKLDFNNYEMSNLLGVTI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH
DAVKKSKQRLKKKLGDKYDLLFEIIDYK
HHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA