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The map label for this gene is yesW [H]

Identifier: 146301958

GI number: 146301958

Start: 5077340

End: 5079190

Strand: Reverse

Name: yesW [H]

Synonym: Fjoh_4222

Alternate gene names: 146301958

Gene position: 5079190-5077340 (Counterclockwise)

Preceding gene: 146301959

Following gene: 146301957

Centisome position: 83.31

GC content: 39.65

Gene sequence:

>1851_bases
ATGAAAAAATATATTCTCTTTTTATTGCTTTTTGTGAGTTTGAAAGCTTTGAGCCAAAGACAAATGGAAAACTTAGACCG
CGGTATCATCGCCATAAAAGACAAAGGACAGTTTTTTATCAGCTGGCGGGTTTTAGGAACCGATCCTGATGATCTTGCTT
TTAATCTGTATCGAAAAAGCGGTACTCAAAAAGCAGTTTTATTAAATGAAAACCCTATTACCGGAGCGACTAATTTTATT
GATGCCAAAGCCAATGCCAAAGAAGAAAATACCTGGTTTGTAAAAACGGTTTTAAAAGGAAAAGAAGCTGCAGCTTCAGG
AAGTTTTACAATTCCGGCGAATGCCTCAGATAAACAATATTTATCTATTAAATTAAAAGAAATTGAAGGCTATATGGCAA
ATGATGTTTCTGTTGGCGATTTAAACGGAGACGGAAAATATGAATTAATAGTTCACATGACCGGAAAAGGACATGATAAT
TCTCAAACCGGAATTACAGATCCGCCTATATTTCAGGCGTATACTTTAGACGGAACGTTTTTATGGCAGATTAATCTTGG
GAAAAACATTCGCGAAGGCGCACATTATACGCAGTTTATGGTGTATGATTTAGACGGTGACGGTTTTGCTGAACTGGTCT
GTAAAACTGCCGACGGAACAACGGACAGTGAAGGAAATGTGGTTGGAGACGCTTCAAAAGACTGGGTTGACCGTGATCCT
GATTCTAAAACGTATGGCAAGATTTTAAAAGGCCCGGAATATCTTTCGGTTTTTGACGGAAGAACAGGAAAATTGATTAT
TACTGTAGATTATATTCCGCAGCGAGGCGATTTAGCAGGCTGGGGCGGAAGAGGAGGAAGCGGAGGAAACGATACAAAAG
GAAACCGAATGGATCGTTTTCTTGCCTGTATTGCGTATCTCGACGGCGTTCATCCAAGTGTTGTAATGTGCCGTGGTTAT
TATGGCAGAACAGTTTTGGCAGCCTGGGATTTTAAAAATAAAAAACTGACTTCAAAATGGGTTTTCGACAGTAAAGATGC
TGAAAATCCCTATTCGGGAATGGGAAATCATAATTTGACGGTTACCGATGTTGACAATGATGGAAAAGATGAAATAATCT
ATGGATCGATGTGTGTTGACGACAACGGACAAGGTTTGTACACAACGGGTTTCAGGCACGGAGACGCGATTCATGTTTCT
GATCTTGATCTGGATATTCCGGGTCTGGAAGTTTTTGGCATTCATGAAATCGAAAATGGTACAACGGGACCTGGTGTCAC
TCTATTTTCGGCCAAAGACGGAAAAGTATTGTTTACAGGTTCTCTTAATGAAGATGTAGGCCGGGGCGTTGCAGATAATA
TTGATGCGACCCGAAAAGGTGCGCAGTGCTGGTGGTCTGGCTCGCCTTATCTGCATGATATGAAAGGAAATAACATTGGT
AAAGCACCAAGTTCGACTAATTTTTTAATTTATTGGGACGGCGATACTTCTAGAGAACTTTTAAATTCTAACTATATTGA
CAAATACAATTCAGGAAGATTGTTTACAGCAGAAGGAGCAGTTTCTAATAACGGAACTAAATCGACTCCGGCACTTTCGG
CAGATATTCTGGGAGATTGGCGGGAAGAATTAATTTTAAGATCGGAAGATAATAAAGAACTTAGGATTTATTCTACGATA
ATTCCAACAAATGTAAAACAGTATACTTTAATGCACGATCCTCAATATCGATTAAGTGTTGCCTGGCAGAATGTTGGTTA
TAACCAGCCGCCACACACCAGTTTTTATATGGGAGCAGCTATGGATCCGGCTCCAAAGCCTAATATAGTTTTAGTGCCGT
CAAAAAAATAA

Upstream 100 bases:

>100_bases
CGTAAAGCTTTTATTTAAAAAAAATCTTTGCGTCTTCGCGACTTTGCGAGATTAATAAAAATCTGTGTGAAACAACTAAC
CACAATTCGATATCAATTCT

Downstream 100 bases:

>100_bases
CTGTAAATAGTACCTTTTTAGGAAAAAATACTTCTTTAGAGATGCCAGAAAGCTGTTTTTGGCATCTCTTTTTATTATGC
TCACATAGTAAAATCTGTAA

Product: FG-GAP repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MKKYILFLLLFVSLKALSQRQMENLDRGIIAIKDKGQFFISWRVLGTDPDDLAFNLYRKSGTQKAVLLNENPITGATNFI
DAKANAKEENTWFVKTVLKGKEAAASGSFTIPANASDKQYLSIKLKEIEGYMANDVSVGDLNGDGKYELIVHMTGKGHDN
SQTGITDPPIFQAYTLDGTFLWQINLGKNIREGAHYTQFMVYDLDGDGFAELVCKTADGTTDSEGNVVGDASKDWVDRDP
DSKTYGKILKGPEYLSVFDGRTGKLIITVDYIPQRGDLAGWGGRGGSGGNDTKGNRMDRFLACIAYLDGVHPSVVMCRGY
YGRTVLAAWDFKNKKLTSKWVFDSKDAENPYSGMGNHNLTVTDVDNDGKDEIIYGSMCVDDNGQGLYTTGFRHGDAIHVS
DLDLDIPGLEVFGIHEIENGTTGPGVTLFSAKDGKVLFTGSLNEDVGRGVADNIDATRKGAQCWWSGSPYLHDMKGNNIG
KAPSSTNFLIYWDGDTSRELLNSNYIDKYNSGRLFTAEGAVSNNGTKSTPALSADILGDWREELILRSEDNKELRIYSTI
IPTNVKQYTLMHDPQYRLSVAWQNVGYNQPPHTSFYMGAAMDPAPKPNIVLVPSKK

Sequences:

>Translated_616_residues
MKKYILFLLLFVSLKALSQRQMENLDRGIIAIKDKGQFFISWRVLGTDPDDLAFNLYRKSGTQKAVLLNENPITGATNFI
DAKANAKEENTWFVKTVLKGKEAAASGSFTIPANASDKQYLSIKLKEIEGYMANDVSVGDLNGDGKYELIVHMTGKGHDN
SQTGITDPPIFQAYTLDGTFLWQINLGKNIREGAHYTQFMVYDLDGDGFAELVCKTADGTTDSEGNVVGDASKDWVDRDP
DSKTYGKILKGPEYLSVFDGRTGKLIITVDYIPQRGDLAGWGGRGGSGGNDTKGNRMDRFLACIAYLDGVHPSVVMCRGY
YGRTVLAAWDFKNKKLTSKWVFDSKDAENPYSGMGNHNLTVTDVDNDGKDEIIYGSMCVDDNGQGLYTTGFRHGDAIHVS
DLDLDIPGLEVFGIHEIENGTTGPGVTLFSAKDGKVLFTGSLNEDVGRGVADNIDATRKGAQCWWSGSPYLHDMKGNNIG
KAPSSTNFLIYWDGDTSRELLNSNYIDKYNSGRLFTAEGAVSNNGTKSTPALSADILGDWREELILRSEDNKELRIYSTI
IPTNVKQYTLMHDPQYRLSVAWQNVGYNQPPHTSFYMGAAMDPAPKPNIVLVPSKK
>Mature_616_residues
MKKYILFLLLFVSLKALSQRQMENLDRGIIAIKDKGQFFISWRVLGTDPDDLAFNLYRKSGTQKAVLLNENPITGATNFI
DAKANAKEENTWFVKTVLKGKEAAASGSFTIPANASDKQYLSIKLKEIEGYMANDVSVGDLNGDGKYELIVHMTGKGHDN
SQTGITDPPIFQAYTLDGTFLWQINLGKNIREGAHYTQFMVYDLDGDGFAELVCKTADGTTDSEGNVVGDASKDWVDRDP
DSKTYGKILKGPEYLSVFDGRTGKLIITVDYIPQRGDLAGWGGRGGSGGNDTKGNRMDRFLACIAYLDGVHPSVVMCRGY
YGRTVLAAWDFKNKKLTSKWVFDSKDAENPYSGMGNHNLTVTDVDNDGKDEIIYGSMCVDDNGQGLYTTGFRHGDAIHVS
DLDLDIPGLEVFGIHEIENGTTGPGVTLFSAKDGKVLFTGSLNEDVGRGVADNIDATRKGAQCWWSGSPYLHDMKGNNIG
KAPSSTNFLIYWDGDTSRELLNSNYIDKYNSGRLFTAEGAVSNNGTKSTPALSADILGDWREELILRSEDNKELRIYSTI
IPTNVKQYTLMHDPQYRLSVAWQNVGYNQPPHTSFYMGAAMDPAPKPNIVLVPSKK

Specific function: Pectinolytic enzyme that degrades type I rhamnogalacturonan from plant cell walls and releases oligosaccharide products. Degrades rhamnogalacturonan, polygalacturonic acid, pectic acid and pectin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide lyase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67812; Mature: 67812

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYILFLLLFVSLKALSQRQMENLDRGIIAIKDKGQFFISWRVLGTDPDDLAFNLYRKS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEECCCCCHHEEEEEECC
GTQKAVLLNENPITGATNFIDAKANAKEENTWFVKTVLKGKEAAASGSFTIPANASDKQY
CCCEEEEECCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCEE
LSIKLKEIEGYMANDVSVGDLNGDGKYELIVHMTGKGHDNSQTGITDPPIFQAYTLDGTF
EEEEEEEECCEEECCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCEE
LWQINLGKNIREGAHYTQFMVYDLDGDGFAELVCKTADGTTDSEGNVVGDASKDWVDRDP
EEEEECCCCCCCCCCEEEEEEEEECCCCHHHEEEECCCCCCCCCCCEECCCCCCCCCCCC
DSKTYGKILKGPEYLSVFDGRTGKLIITVDYIPQRGDLAGWGGRGGSGGNDTKGNRMDRF
CCHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LACIAYLDGVHPSVVMCRGYYGRTVLAAWDFKNKKLTSKWVFDSKDAENPYSGMGNHNLT
HHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEE
VTDVDNDGKDEIIYGSMCVDDNGQGLYTTGFRHGDAIHVSDLDLDIPGLEVFGIHEIENG
EEECCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCEEEEEEEEECCC
TTGPGVTLFSAKDGKVLFTGSLNEDVGRGVADNIDATRKGAQCWWSGSPYLHDMKGNNIG
CCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCC
KAPSSTNFLIYWDGDTSRELLNSNYIDKYNSGRLFTAEGAVSNNGTKSTPALSADILGDW
CCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEHHHHHCC
REELILRSEDNKELRIYSTIIPTNVKQYTLMHDPQYRLSVAWQNVGYNQPPHTSFYMGAA
HHHHEEECCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCEEEECCC
MDPAPKPNIVLVPSKK
CCCCCCCCEEEEECCC
>Mature Secondary Structure
MKKYILFLLLFVSLKALSQRQMENLDRGIIAIKDKGQFFISWRVLGTDPDDLAFNLYRKS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEECCCCCHHEEEEEECC
GTQKAVLLNENPITGATNFIDAKANAKEENTWFVKTVLKGKEAAASGSFTIPANASDKQY
CCCEEEEECCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCEE
LSIKLKEIEGYMANDVSVGDLNGDGKYELIVHMTGKGHDNSQTGITDPPIFQAYTLDGTF
EEEEEEEECCEEECCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCEE
LWQINLGKNIREGAHYTQFMVYDLDGDGFAELVCKTADGTTDSEGNVVGDASKDWVDRDP
EEEEECCCCCCCCCCEEEEEEEEECCCCHHHEEEECCCCCCCCCCCEECCCCCCCCCCCC
DSKTYGKILKGPEYLSVFDGRTGKLIITVDYIPQRGDLAGWGGRGGSGGNDTKGNRMDRF
CCHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LACIAYLDGVHPSVVMCRGYYGRTVLAAWDFKNKKLTSKWVFDSKDAENPYSGMGNHNLT
HHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEE
VTDVDNDGKDEIIYGSMCVDDNGQGLYTTGFRHGDAIHVSDLDLDIPGLEVFGIHEIENG
EEECCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCEEEEEEEEECCC
TTGPGVTLFSAKDGKVLFTGSLNEDVGRGVADNIDATRKGAQCWWSGSPYLHDMKGNNIG
CCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCC
KAPSSTNFLIYWDGDTSRELLNSNYIDKYNSGRLFTAEGAVSNNGTKSTPALSADILGDW
CCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEHHHHHCC
REELILRSEDNKELRIYSTIIPTNVKQYTLMHDPQYRLSVAWQNVGYNQPPHTSFYMGAA
HHHHEEECCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCEEEECCC
MDPAPKPNIVLVPSKK
CCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]