Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is foxA [H]

Identifier: 146301957

GI number: 146301957

Start: 5074699

End: 5077086

Strand: Reverse

Name: foxA [H]

Synonym: Fjoh_4221

Alternate gene names: 146301957

Gene position: 5077086-5074699 (Counterclockwise)

Preceding gene: 146301958

Following gene: 146301955

Centisome position: 83.27

GC content: 34.55

Gene sequence:

>2388_bases
ATGAAAGTAAAAATATTACTTCCGTTGTTAAGCTTTTGCTTAATGCTGCTTACAAGTGTAACTTCGTTCGCACAAACGGC
TACCATTAAAGGTATGATTTCATTATCGACTAATGAAGCTGCAGATAATGTTTCAGTAACTCTAAAAGGAACACGTGTTG
GAACTACAACTGATGCGCAGGGAAATTACGAAATAAAAAATGTTAAGCCTGGAACTTATACTATAAGAGTTTCGGCAGTA
GGATTTTCATCAAAAGAAAAAAGCATTACCGTTAGTTCAGCTAATGAAATTGTAGAAAATTTTACATTAATTACTACATC
AGAAAACCTTACTGAAGTATTTGTAAAAGGAAATGCAAACAAATACACAAAATCAGAAAGTGAGTACGTATCAAGAATGC
AGGTTAAAAACCTTGAAAACTCACAAGTTTACAACGTAGTTACTAAAGAGTTAATGAAAGACCAATTGGTAACGAACCAA
GACGAAGCGTTGAAAAACGTTCCGGGTTTATACCAATTATGGGGAGCTACTAACCGTGCAGGTGATGGAGGTTCTTGGTA
TTCATTACGTGGATTTACAACTCAAAGTTTAGTAAGAAATGGTATTGCAGGAAAAGTAAACAGTAATTCTGATGCTGCAA
ACCTTGAAAGAATTGAGGTTATCAAAGGACCTTCTGCTACATTATTTGGAAACGTACTTTCTTCTTACGGAGGTTTAATT
AACCGTGTAACTAAAAAACCGTATGAAACTTTTGGAGGAGAGATTGCTTATCAGGCAGGAAGCTACGGATTTAACCGTGT
TTCTGCTGACATCAATACACCATTAAACGATGACAATACAGCATTATTTAGATTAAACACTTCTTATAACAATACGAATA
CTTTTCAGGATTATGGATCTTCAAGAAGTTTCTTTGTGGCGCCATCATTCTCTTATAAAGTAAACGATAAATTGACTTTA
TCTCTTGATGCAGAAATTGGTGACCAAAATAACTCTGGAATGCCATTAATTTATCTTCCTTTTGATGTATCTGTTGCTGC
CTTAGGGTTTAACAATGCAAAGGATCTTAATATGAACTTTAAAAGATCATTTTGGGGAGACGAATTCATAACCAATACAA
AAACATTCAACGTTTTTGCTCAGGCAAATTATAAAATTTCTGATGAATGGACTTCTCAGTCTGTATTCAGCAGTACTTCT
AACAGAGCTTCTGGGCTGCAGACTTGGTTCTATCTTTACCCAAATGAAGAAATATCTAGAAATGCATGGAATGCTAACGG
AAAAGACAATGCAATTGAATTCCAGCAAAACTTTAATGGTGATTTCTTACTTTTCGGAAAAATGAGAAACCGTTTCTTAA
TTGGTGGTGATTTATTCCACTCTACAAACAGATTAGGATACAGACTTTTACCAAATGGTGAATTTGATAAGATAGGATAT
ACAGGAACTACGGCAGCTTATAATAACTTTAATCCAACAACTGTAAATGCTGAATTGGTAAATGGATTTGATTATAAAAC
AAACAGCGCGCTTTCAACCTATAGTGCTTATGTTGCAGATGCTATTAACATTACAGAAAGTTTAATTGTTTCTGCAGCGG
TACGTTTTGATCATTATGATAACCAAGGAACTACAGATGATACTACAGGTCAAAAAGCAGGTGATTTTTCACAAAATGCA
TTTTCTCCAAAATTTGGTGTAGTGTATCAAGTAATAAAAGATCAGGTTTCTGTTTTTGGTAACTACCAAAATAGTTTTAC
AAATATTGGATACATCAATGCAAATGTTGGAGGTGCTCTTCAAATGCAAAAATTTGATCCGGAAAGAGCAAACCAGTTTG
AAGGAGGTATTAAAGTAAATGCTTTCCAAAACAAAGTAAGCGCTACGCTTAGCTACTACGATATTAAAGTAAAAGATATT
GTAACTGCAGATCCAAGTTTACCAAACGCAAGTGTACAAAACGGAACTCAATACAGTAAAGGTTTTGAATTAGAAGTTAC
AGCAAACCCAATTCCAGGATTAAACCTTCTTGTAGGTTACTCAAACAACGATTCTAAATTAAACGGATTAAGACCTGTAA
CTGCAGGACCAGAAAACTTAATCAACTACTGGATCAGCTATAATTTACAAAATGCTACATTCAAAGGTTTAGGTTTAGGA
TTTGGAGGTAACTACGGAGACGCTACGTATATCTACAACAACGGAACTGAAACTTTCGAACTTCCATCTTACGCTGTAAT
CAATGCTGCTTTGTACTACGATCAGCCTAAATACAGAGTTTCATTAAAAGTAAACAACCTTACAGACGAATTGTACTTTA
ATGGTTATACAACAATCAACGTTCAGGCACCTCGTACTTTTATGGGAAGCGTAACGTATAAATTCTAA

Upstream 100 bases:

>100_bases
AACTTAATGAAATGCATTATTATCTGGAATAAATAAAAATAATTTGGTATAGTTTAACACAACCTATAAATTTGCCTTAT
TCAAAATAAATCTAAATAAA

Downstream 100 bases:

>100_bases
TAGGATTTAAGATTAAGAAATAAAAAAAGCCCGAACAAATCAATGTTCGGGTTTTTTTATTATAAAAGGTCAGTACTTAA
AACCTTAGCAGCTTAGCATC

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 795; Mature: 795

Protein sequence:

>795_residues
MKVKILLPLLSFCLMLLTSVTSFAQTATIKGMISLSTNEAADNVSVTLKGTRVGTTTDAQGNYEIKNVKPGTYTIRVSAV
GFSSKEKSITVSSANEIVENFTLITTSENLTEVFVKGNANKYTKSESEYVSRMQVKNLENSQVYNVVTKELMKDQLVTNQ
DEALKNVPGLYQLWGATNRAGDGGSWYSLRGFTTQSLVRNGIAGKVNSNSDAANLERIEVIKGPSATLFGNVLSSYGGLI
NRVTKKPYETFGGEIAYQAGSYGFNRVSADINTPLNDDNTALFRLNTSYNNTNTFQDYGSSRSFFVAPSFSYKVNDKLTL
SLDAEIGDQNNSGMPLIYLPFDVSVAALGFNNAKDLNMNFKRSFWGDEFITNTKTFNVFAQANYKISDEWTSQSVFSSTS
NRASGLQTWFYLYPNEEISRNAWNANGKDNAIEFQQNFNGDFLLFGKMRNRFLIGGDLFHSTNRLGYRLLPNGEFDKIGY
TGTTAAYNNFNPTTVNAELVNGFDYKTNSALSTYSAYVADAINITESLIVSAAVRFDHYDNQGTTDDTTGQKAGDFSQNA
FSPKFGVVYQVIKDQVSVFGNYQNSFTNIGYINANVGGALQMQKFDPERANQFEGGIKVNAFQNKVSATLSYYDIKVKDI
VTADPSLPNASVQNGTQYSKGFELEVTANPIPGLNLLVGYSNNDSKLNGLRPVTAGPENLINYWISYNLQNATFKGLGLG
FGGNYGDATYIYNNGTETFELPSYAVINAALYYDQPKYRVSLKVNNLTDELYFNGYTTINVQAPRTFMGSVTYKF

Sequences:

>Translated_795_residues
MKVKILLPLLSFCLMLLTSVTSFAQTATIKGMISLSTNEAADNVSVTLKGTRVGTTTDAQGNYEIKNVKPGTYTIRVSAV
GFSSKEKSITVSSANEIVENFTLITTSENLTEVFVKGNANKYTKSESEYVSRMQVKNLENSQVYNVVTKELMKDQLVTNQ
DEALKNVPGLYQLWGATNRAGDGGSWYSLRGFTTQSLVRNGIAGKVNSNSDAANLERIEVIKGPSATLFGNVLSSYGGLI
NRVTKKPYETFGGEIAYQAGSYGFNRVSADINTPLNDDNTALFRLNTSYNNTNTFQDYGSSRSFFVAPSFSYKVNDKLTL
SLDAEIGDQNNSGMPLIYLPFDVSVAALGFNNAKDLNMNFKRSFWGDEFITNTKTFNVFAQANYKISDEWTSQSVFSSTS
NRASGLQTWFYLYPNEEISRNAWNANGKDNAIEFQQNFNGDFLLFGKMRNRFLIGGDLFHSTNRLGYRLLPNGEFDKIGY
TGTTAAYNNFNPTTVNAELVNGFDYKTNSALSTYSAYVADAINITESLIVSAAVRFDHYDNQGTTDDTTGQKAGDFSQNA
FSPKFGVVYQVIKDQVSVFGNYQNSFTNIGYINANVGGALQMQKFDPERANQFEGGIKVNAFQNKVSATLSYYDIKVKDI
VTADPSLPNASVQNGTQYSKGFELEVTANPIPGLNLLVGYSNNDSKLNGLRPVTAGPENLINYWISYNLQNATFKGLGLG
FGGNYGDATYIYNNGTETFELPSYAVINAALYYDQPKYRVSLKVNNLTDELYFNGYTTINVQAPRTFMGSVTYKF
>Mature_795_residues
MKVKILLPLLSFCLMLLTSVTSFAQTATIKGMISLSTNEAADNVSVTLKGTRVGTTTDAQGNYEIKNVKPGTYTIRVSAV
GFSSKEKSITVSSANEIVENFTLITTSENLTEVFVKGNANKYTKSESEYVSRMQVKNLENSQVYNVVTKELMKDQLVTNQ
DEALKNVPGLYQLWGATNRAGDGGSWYSLRGFTTQSLVRNGIAGKVNSNSDAANLERIEVIKGPSATLFGNVLSSYGGLI
NRVTKKPYETFGGEIAYQAGSYGFNRVSADINTPLNDDNTALFRLNTSYNNTNTFQDYGSSRSFFVAPSFSYKVNDKLTL
SLDAEIGDQNNSGMPLIYLPFDVSVAALGFNNAKDLNMNFKRSFWGDEFITNTKTFNVFAQANYKISDEWTSQSVFSSTS
NRASGLQTWFYLYPNEEISRNAWNANGKDNAIEFQQNFNGDFLLFGKMRNRFLIGGDLFHSTNRLGYRLLPNGEFDKIGY
TGTTAAYNNFNPTTVNAELVNGFDYKTNSALSTYSAYVADAINITESLIVSAAVRFDHYDNQGTTDDTTGQKAGDFSQNA
FSPKFGVVYQVIKDQVSVFGNYQNSFTNIGYINANVGGALQMQKFDPERANQFEGGIKVNAFQNKVSATLSYYDIKVKDI
VTADPSLPNASVQNGTQYSKGFELEVTANPIPGLNLLVGYSNNDSKLNGLRPVTAGPENLINYWISYNLQNATFKGLGLG
FGGNYGDATYIYNNGTETFELPSYAVINAALYYDQPKYRVSLKVNNLTDELYFNGYTTINVQAPRTFMGSVTYKF

Specific function: Ferrioxamine binding and uptake, in association with the tonB protein. May play a role in intestinal colonization [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=711, Percent_Identity=24.4725738396624, Blast_Score=111, Evalue=2e-25,
Organism=Escherichia coli, GI1787024, Length=741, Percent_Identity=22.6720647773279, Blast_Score=94, Evalue=4e-20,
Organism=Escherichia coli, GI1787344, Length=741, Percent_Identity=23.6167341430499, Blast_Score=92, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 87717; Mature: 87717

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKILLPLLSFCLMLLTSVTSFAQTATIKGMISLSTNEAADNVSVTLKGTRVGTTTDAQ
CEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCC
GNYEIKNVKPGTYTIRVSAVGFSSKEKSITVSSANEIVENFTLITTSENLTEVFVKGNAN
CCEEEEEECCCEEEEEEEEECCCCCCCEEEEECHHHHHHCEEEEEECCCEEEEEEECCCC
KYTKSESEYVSRMQVKNLENSQVYNVVTKELMKDQLVTNQDEALKNVPGLYQLWGATNRA
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCC
GDGGSWYSLRGFTTQSLVRNGIAGKVNSNSDAANLERIEVIKGPSATLFGNVLSSYGGLI
CCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
NRVTKKPYETFGGEIAYQAGSYGFNRVSADINTPLNDDNTALFRLNTSYNNTNTFQDYGS
HHHHCCHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHCCC
SRSFFVAPSFSYKVNDKLTLSLDAEIGDQNNSGMPLIYLPFDVSVAALGFNNAKDLNMNF
CCEEEEECCCEEEECCEEEEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCC
KRSFWGDEFITNTKTFNVFAQANYKISDEWTSQSVFSSTSNRASGLQTWFYLYPNEEISR
CCCCCCCHHHCCCEEEEEEEEECEEECCCCCCHHHHHCCCCCCCCCEEEEEEECCCHHCC
NAWNANGKDNAIEFQQNFNGDFLLFGKMRNRFLIGGDLFHSTNRLGYRLLPNGEFDKIGY
CCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEECHHCCCCCCCCEEECCCCCCCCCCC
TGTTAAYNNFNPTTVNAELVNGFDYKTNSALSTYSAYVADAINITESLIVSAAVRFDHYD
CCCCCEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
NQGTTDDTTGQKAGDFSQNAFSPKFGVVYQVIKDQVSVFGNYQNSFTNIGYINANVGGAL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEE
QMQKFDPERANQFEGGIKVNAFQNKVSATLSYYDIKVKDIVTADPSLPNASVQNGTQYSK
EEECCCCHHHHHCCCCEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCC
GFELEVTANPIPGLNLLVGYSNNDSKLNGLRPVTAGPENLINYWISYNLQNATFKGLGLG
CEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHEEEEEEEECCCCEEEEEEEC
FGGNYGDATYIYNNGTETFELPSYAVINAALYYDQPKYRVSLKVNNLTDELYFNGYTTIN
CCCCCCCEEEEECCCCCEEECCCEEEEEEEEEECCCCEEEEEEEECCCCEEEECCEEEEE
VQAPRTFMGSVTYKF
EECCCEEECCEEECC
>Mature Secondary Structure
MKVKILLPLLSFCLMLLTSVTSFAQTATIKGMISLSTNEAADNVSVTLKGTRVGTTTDAQ
CEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCC
GNYEIKNVKPGTYTIRVSAVGFSSKEKSITVSSANEIVENFTLITTSENLTEVFVKGNAN
CCEEEEEECCCEEEEEEEEECCCCCCCEEEEECHHHHHHCEEEEEECCCEEEEEEECCCC
KYTKSESEYVSRMQVKNLENSQVYNVVTKELMKDQLVTNQDEALKNVPGLYQLWGATNRA
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCC
GDGGSWYSLRGFTTQSLVRNGIAGKVNSNSDAANLERIEVIKGPSATLFGNVLSSYGGLI
CCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
NRVTKKPYETFGGEIAYQAGSYGFNRVSADINTPLNDDNTALFRLNTSYNNTNTFQDYGS
HHHHCCHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHCCC
SRSFFVAPSFSYKVNDKLTLSLDAEIGDQNNSGMPLIYLPFDVSVAALGFNNAKDLNMNF
CCEEEEECCCEEEECCEEEEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCC
KRSFWGDEFITNTKTFNVFAQANYKISDEWTSQSVFSSTSNRASGLQTWFYLYPNEEISR
CCCCCCCHHHCCCEEEEEEEEECEEECCCCCCHHHHHCCCCCCCCCEEEEEEECCCHHCC
NAWNANGKDNAIEFQQNFNGDFLLFGKMRNRFLIGGDLFHSTNRLGYRLLPNGEFDKIGY
CCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEECHHCCCCCCCCEEECCCCCCCCCCC
TGTTAAYNNFNPTTVNAELVNGFDYKTNSALSTYSAYVADAINITESLIVSAAVRFDHYD
CCCCCEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
NQGTTDDTTGQKAGDFSQNAFSPKFGVVYQVIKDQVSVFGNYQNSFTNIGYINANVGGAL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEE
QMQKFDPERANQFEGGIKVNAFQNKVSATLSYYDIKVKDIVTADPSLPNASVQNGTQYSK
EEECCCCHHHHHCCCCEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCC
GFELEVTANPIPGLNLLVGYSNNDSKLNGLRPVTAGPENLINYWISYNLQNATFKGLGLG
CEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHEEEEEEEECCCCEEEEEEEC
FGGNYGDATYIYNNGTETFELPSYAVINAALYYDQPKYRVSLKVNNLTDELYFNGYTTIN
CCCCCCCEEEEECCCCCEEECCCEEEEEEEEEECCCCEEEEEEEECCCCEEEECCEEEEE
VQAPRTFMGSVTYKF
EECCCEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609; 10103258; 7642488 [H]