Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301954

Identifier: 146301954

GI number: 146301954

Start: 5070937

End: 5072340

Strand: Direct

Name: 146301954

Synonym: Fjoh_4218

Alternate gene names: NA

Gene position: 5070937-5072340 (Clockwise)

Preceding gene: 146301953

Following gene: 146301956

Centisome position: 83.17

GC content: 35.11

Gene sequence:

>1404_bases
ATGAAAAAAATCATTTTCCTGGCAGTAATCGTATTTTTAATCACTACGGCCTGCAAAAAAGAAACTCCTTTAGATAAAAC
AAATACGGCAGATAACTCTGTTTCACCCGATTCTGTAACAGCCATTGCAAAAGAAGCATGGATTTACGGTTATCCTGTTT
TTTACAATTATAAAATGATTTATGCTACTGCCCTCAATAAACAATCCGGAGAATTTGTTGGTTTTAATAAATTCAAAAAC
ATTGCTATGAGTGCTACACCATCTGACACATTGGTTGTTACGATAAATAATGATACCCCTTATTCGATGGCGTCATTAAA
TGTTTCTGATGAGCCAGTTGTAATTGAGCTTCCAAAAGTTGAGGAAAACAGATATTATGTTATGCAGTTTGTAGATCTTT
ATACCTTTAATTTTGAATATCTTGGGTCGCGCGTGTCAGGAAATAATCCAGGAAAATATCTTATCGCTGGTCCTGACTGG
AAAGGTGAAACTCCAAAAGGCATTAATAAAGTATTAAAATCTGAAACCAACTTAATTTTTCTTGTCGGCCGTACACAGCT
TCATTCTCCAGAGGATGTGTCAAATCTAAAAAAAATACAAGAACAGTATAAATTAATGCCGCTTCATGAATATACAAAAC
AGCCGGTCCCACAAGTTAAAAAGTATGATTTACCGCTTCCTGTCTGGAAAGAAGATGATTACAGTACGCCTGAGTTTATC
AATGTTTTAAACGCATTATTACAATATGCAAACGTAGACAGCAGTGAAACGAAACTTCGGGAACGTTTTGCTAAAATTGG
GATTATTCCGGGCAAACGTTTTGACAGTTCAAAATATTCTCCTGAGACTATAATAGCTATCGAAAAAGGAATTATCGAAG
CCAAAAAAGAACTAGAATCCGGAGTTACTAATCTTAGAGATTTCGGAAATCTGTTTGGTACAAGAAAAGCTCTTGAAAAC
AATTATATGAACCGTGCCATTGCCGCTGCAGCCGGAATTTACGGAAACACGAAAGAAGAAGCTGTTTATACCGGAAGCGC
TGTTGATAAAGATAACCAGCCTTTAGCCGGAAATAAAAATTATATTTTAAAATTCAGTAAAAACCAGCTTCCTGAGGCGA
AATATTTTTGGAGCATAACCATGTATAATCTTCCTAAACGCTTATTGGTTCGAAATCCAATTTCGAGATATTCGATAGGC
AACAAATCAAAAGGCTTAAAATATGAGTCAAATGGAGATTTAATTATTTACCTGCAGGCTTCTTCACCGGGAAAAGATAA
AGAGAGTAACTGGCTTCCGACTCCTAAAAATGAAAACTTTAATTTTGTTATTCGAATTTACGGTCCAAATGAAAAAGTAA
TAAATGGTTCATGGAAAATGCCATTGCCAGAAATTGTCAAATAA

Upstream 100 bases:

>100_bases
ATATTTGCTCTTTGTAAAGCATAAGTTTTTTCTTAAAAAGTTAATTTTAAGCCCTTTAAAAATACCAGACGATTCTTTTG
TACAATTAATCCATTGAATT

Downstream 100 bases:

>100_bases
TATATGTCCATAAAAAAGCCTGAAATATTAAAATTTCAGGCTTTTTACTTTTTTAAAAGCTCTTATTTAATCACTTTATC
ATAAGGAATATACTGATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MKKIIFLAVIVFLITTACKKETPLDKTNTADNSVSPDSVTAIAKEAWIYGYPVFYNYKMIYATALNKQSGEFVGFNKFKN
IAMSATPSDTLVVTINNDTPYSMASLNVSDEPVVIELPKVEENRYYVMQFVDLYTFNFEYLGSRVSGNNPGKYLIAGPDW
KGETPKGINKVLKSETNLIFLVGRTQLHSPEDVSNLKKIQEQYKLMPLHEYTKQPVPQVKKYDLPLPVWKEDDYSTPEFI
NVLNALLQYANVDSSETKLRERFAKIGIIPGKRFDSSKYSPETIIAIEKGIIEAKKELESGVTNLRDFGNLFGTRKALEN
NYMNRAIAAAAGIYGNTKEEAVYTGSAVDKDNQPLAGNKNYILKFSKNQLPEAKYFWSITMYNLPKRLLVRNPISRYSIG
NKSKGLKYESNGDLIIYLQASSPGKDKESNWLPTPKNENFNFVIRIYGPNEKVINGSWKMPLPEIVK

Sequences:

>Translated_467_residues
MKKIIFLAVIVFLITTACKKETPLDKTNTADNSVSPDSVTAIAKEAWIYGYPVFYNYKMIYATALNKQSGEFVGFNKFKN
IAMSATPSDTLVVTINNDTPYSMASLNVSDEPVVIELPKVEENRYYVMQFVDLYTFNFEYLGSRVSGNNPGKYLIAGPDW
KGETPKGINKVLKSETNLIFLVGRTQLHSPEDVSNLKKIQEQYKLMPLHEYTKQPVPQVKKYDLPLPVWKEDDYSTPEFI
NVLNALLQYANVDSSETKLRERFAKIGIIPGKRFDSSKYSPETIIAIEKGIIEAKKELESGVTNLRDFGNLFGTRKALEN
NYMNRAIAAAAGIYGNTKEEAVYTGSAVDKDNQPLAGNKNYILKFSKNQLPEAKYFWSITMYNLPKRLLVRNPISRYSIG
NKSKGLKYESNGDLIIYLQASSPGKDKESNWLPTPKNENFNFVIRIYGPNEKVINGSWKMPLPEIVK
>Mature_467_residues
MKKIIFLAVIVFLITTACKKETPLDKTNTADNSVSPDSVTAIAKEAWIYGYPVFYNYKMIYATALNKQSGEFVGFNKFKN
IAMSATPSDTLVVTINNDTPYSMASLNVSDEPVVIELPKVEENRYYVMQFVDLYTFNFEYLGSRVSGNNPGKYLIAGPDW
KGETPKGINKVLKSETNLIFLVGRTQLHSPEDVSNLKKIQEQYKLMPLHEYTKQPVPQVKKYDLPLPVWKEDDYSTPEFI
NVLNALLQYANVDSSETKLRERFAKIGIIPGKRFDSSKYSPETIIAIEKGIIEAKKELESGVTNLRDFGNLFGTRKALEN
NYMNRAIAAAAGIYGNTKEEAVYTGSAVDKDNQPLAGNKNYILKFSKNQLPEAKYFWSITMYNLPKRLLVRNPISRYSIG
NKSKGLKYESNGDLIIYLQASSPGKDKESNWLPTPKNENFNFVIRIYGPNEKVINGSWKMPLPEIVK

Specific function: Unknown

COG id: COG5361

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52838; Mature: 52838

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIFLAVIVFLITTACKKETPLDKTNTADNSVSPDSVTAIAKEAWIYGYPVFYNYKMI
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCEEEEEEEE
YATALNKQSGEFVGFNKFKNIAMSATPSDTLVVTINNDTPYSMASLNVSDEPVVIELPKV
EEEEECCCCCCEEEHHHHCCEEEECCCCCEEEEEECCCCCCEEEEECCCCCCEEEECCCC
EENRYYVMQFVDLYTFNFEYLGSRVSGNNPGKYLIAGPDWKGETPKGINKVLKSETNLIF
CCCCEEEEEEEHHHEECHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEE
LVGRTQLHSPEDVSNLKKIQEQYKLMPLHEYTKQPVPQVKKYDLPLPVWKEDDYSTPEFI
EEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHH
NVLNALLQYANVDSSETKLRERFAKIGIIPGKRFDSSKYSPETIIAIEKGIIEAKKELES
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHH
GVTNLRDFGNLFGTRKALENNYMNRAIAAAAGIYGNTKEEAVYTGSAVDKDNQPLAGNKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCC
YILKFSKNQLPEAKYFWSITMYNLPKRLLVRNPISRYSIGNKSKGLKYESNGDLIIYLQA
EEEEECCCCCCCCEEEEEEEEHHCCHHHHHCCCHHHCCCCCCCCCCEEECCCCEEEEEEC
SSPGKDKESNWLPTPKNENFNFVIRIYGPNEKVINGSWKMPLPEIVK
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCHHHCC
>Mature Secondary Structure
MKKIIFLAVIVFLITTACKKETPLDKTNTADNSVSPDSVTAIAKEAWIYGYPVFYNYKMI
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCEEEEEEEE
YATALNKQSGEFVGFNKFKNIAMSATPSDTLVVTINNDTPYSMASLNVSDEPVVIELPKV
EEEEECCCCCCEEEHHHHCCEEEECCCCCEEEEEECCCCCCEEEEECCCCCCEEEECCCC
EENRYYVMQFVDLYTFNFEYLGSRVSGNNPGKYLIAGPDWKGETPKGINKVLKSETNLIF
CCCCEEEEEEEHHHEECHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEE
LVGRTQLHSPEDVSNLKKIQEQYKLMPLHEYTKQPVPQVKKYDLPLPVWKEDDYSTPEFI
EEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHH
NVLNALLQYANVDSSETKLRERFAKIGIIPGKRFDSSKYSPETIIAIEKGIIEAKKELES
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHH
GVTNLRDFGNLFGTRKALENNYMNRAIAAAAGIYGNTKEEAVYTGSAVDKDNQPLAGNKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCC
YILKFSKNQLPEAKYFWSITMYNLPKRLLVRNPISRYSIGNKSKGLKYESNGDLIIYLQA
EEEEECCCCCCCCEEEEEEEEHHCCHHHHHCCCHHHCCCCCCCCCCEEECCCCEEEEEEC
SSPGKDKESNWLPTPKNENFNFVIRIYGPNEKVINGSWKMPLPEIVK
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA