Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is yjdJ [C]

Identifier: 146301916

GI number: 146301916

Start: 5022729

End: 5023025

Strand: Direct

Name: yjdJ [C]

Synonym: Fjoh_4180

Alternate gene names: 146301916

Gene position: 5022729-5023025 (Clockwise)

Preceding gene: 146301915

Following gene: 146301917

Centisome position: 82.38

GC content: 34.01

Gene sequence:

>297_bases
ATGGAAATAATAAAATTAGAATTAAACGAAAAAAACCACGGCAGTTTTAATTTGTATGTTGATGATAAAAAATTAGGCGA
AATGACAGTAAGCATTAAACCCGGCCTGCTGACAGTTTACCATACAGGAGTTGAACCCGAAGGTGAAGGAAAAGGTTATG
CTAAGAAACTTTTAGAAGAAATGGTTTCTTATGTTCGTGCCAATAATTTAAAAGTTTTACCGCTTTGTCCTTACGTTCAC
GCTCAATTTAAAAGACATCCGGATGAATATGAAGATATCTGGCAGAAACAATCTTAA

Upstream 100 bases:

>100_bases
TATAAAATAAATCAATACAGACTGCCTGTAAAGAATTATAATTACAGGCAGTTTAATTTTCTCTCTTAAAAATTACAAAC
AAGCACACATTCAAAATACT

Downstream 100 bases:

>100_bases
AAACAGAATAGTTATGAATACAGAAATTTTAACAGACGGTGTACCTTTAAATGAAGCTAAAAAAGCTTTAATTATGATTC
ACGGCCGTGGTGCCGGTGCT

Product: acetyltransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MEIIKLELNEKNHGSFNLYVDDKKLGEMTVSIKPGLLTVYHTGVEPEGEGKGYAKKLLEEMVSYVRANNLKVLPLCPYVH
AQFKRHPDEYEDIWQKQS

Sequences:

>Translated_98_residues
MEIIKLELNEKNHGSFNLYVDDKKLGEMTVSIKPGLLTVYHTGVEPEGEGKGYAKKLLEEMVSYVRANNLKVLPLCPYVH
AQFKRHPDEYEDIWQKQS
>Mature_98_residues
MEIIKLELNEKNHGSFNLYVDDKKLGEMTVSIKPGLLTVYHTGVEPEGEGKGYAKKLLEEMVSYVRANNLKVLPLCPYVH
AQFKRHPDEYEDIWQKQS

Specific function: Unknown

COG id: COG2388

COG function: function code R; Predicted acetyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11321; Mature: 11321

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIKLELNEKNHGSFNLYVDDKKLGEMTVSIKPGLLTVYHTGVEPEGEGKGYAKKLLEE
CEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHH
MVSYVRANNLKVLPLCPYVHAQFKRHPDEYEDIWQKQS
HHHHHHCCCEEEEEECHHHHHHHHCCCCHHHHHHCCCC
>Mature Secondary Structure
MEIIKLELNEKNHGSFNLYVDDKKLGEMTVSIKPGLLTVYHTGVEPEGEGKGYAKKLLEE
CEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHH
MVSYVRANNLKVLPLCPYVHAQFKRHPDEYEDIWQKQS
HHHHHHCCCEEEEEECHHHHHHHHCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA