| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146301865
Identifier: 146301865
GI number: 146301865
Start: 4962341
End: 4962841
Strand: Reverse
Name: 146301865
Synonym: Fjoh_4129
Alternate gene names: NA
Gene position: 4962841-4962341 (Counterclockwise)
Preceding gene: 146301866
Following gene: 146301857
Centisome position: 81.4
GC content: 35.73
Gene sequence:
>501_bases ATGAAAAAGTTAGTATTCGCCTCAGTATTATTTATGAGTGTATTTTTTGCTCATGCACAAGTATCAATTAATGTAAATAT TGGAACACCTCCAAGCTGGGGACCACAAGGTTATGACGACGACAGATATTATTATTTACCAGACATCGATGTGTATTATG ATGTAAACCAAAGTGTGTTTATTTACGATAACGGAGGAAAATGGATGCGTGAAAAAAGACTTCCTTCAAGATACAGACAA TATGATTTGTATTCAGGTTATAAGGTGGTGTTAACAGATTATAGAGGAGATGCTCCTTATACTTATCACAGTAAACACAG AGCTAATTATCCAAAAGGTTACAAAGGACAGCCTCAGAAAAACAGAGGAGAAAAACCGGTAAAAAACAAATCTCAAGGAA AGCAAAAATCTGATAACAAAGAAAAAGGAAACAGCAGCGGAAAAAACAACAGCCACAAATCAGATAAAGACCACGATCAT TCACAAGGGAATCGCCGCTAA
Upstream 100 bases:
>100_bases GATTGGTTTGGCGGTTCTGTATAATGCATTCTGTAAACGCGAATATTGGCACTACTTTAGATTAGTTTCTAAATGAAATT AATCCCTAAATTCTAAAAAC
Downstream 100 bases:
>100_bases TTAATAAAAAAATAAAACGCCTCAATACGAGGCGTTTTTTATTTTTTTAAATTGTCAATTCACAATTCACAATTCAATTA TTTTTTACTTTATGACCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MKKLVFASVLFMSVFFAHAQVSINVNIGTPPSWGPQGYDDDRYYYLPDIDVYYDVNQSVFIYDNGGKWMREKRLPSRYRQ YDLYSGYKVVLTDYRGDAPYTYHSKHRANYPKGYKGQPQKNRGEKPVKNKSQGKQKSDNKEKGNSSGKNNSHKSDKDHDH SQGNRR
Sequences:
>Translated_166_residues MKKLVFASVLFMSVFFAHAQVSINVNIGTPPSWGPQGYDDDRYYYLPDIDVYYDVNQSVFIYDNGGKWMREKRLPSRYRQ YDLYSGYKVVLTDYRGDAPYTYHSKHRANYPKGYKGQPQKNRGEKPVKNKSQGKQKSDNKEKGNSSGKNNSHKSDKDHDH SQGNRR >Mature_166_residues MKKLVFASVLFMSVFFAHAQVSINVNIGTPPSWGPQGYDDDRYYYLPDIDVYYDVNQSVFIYDNGGKWMREKRLPSRYRQ YDLYSGYKVVLTDYRGDAPYTYHSKHRANYPKGYKGQPQKNRGEKPVKNKSQGKQKSDNKEKGNSSGKNNSHKSDKDHDH SQGNRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19332; Mature: 19332
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVFASVLFMSVFFAHAQVSINVNIGTPPSWGPQGYDDDRYYYLPDIDVYYDVNQSVF CCHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEECCCEEE IYDNGGKWMREKRLPSRYRQYDLYSGYKVVLTDYRGDAPYTYHSKHRANYPKGYKGQPQK EEECCCCHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCC NRGEKPVKNKSQGKQKSDNKEKGNSSGKNNSHKSDKDHDHSQGNRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKLVFASVLFMSVFFAHAQVSINVNIGTPPSWGPQGYDDDRYYYLPDIDVYYDVNQSVF CCHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEECCCEEE IYDNGGKWMREKRLPSRYRQYDLYSGYKVVLTDYRGDAPYTYHSKHRANYPKGYKGQPQK EEECCCCHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCC NRGEKPVKNKSQGKQKSDNKEKGNSSGKNNSHKSDKDHDHSQGNRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA