| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301833
Identifier: 146301833
GI number: 146301833
Start: 4912791
End: 4914809
Strand: Reverse
Name: 146301833
Synonym: Fjoh_4097
Alternate gene names: NA
Gene position: 4914809-4912791 (Counterclockwise)
Preceding gene: 146301834
Following gene: 146301832
Centisome position: 80.61
GC content: 35.56
Gene sequence:
>2019_bases ATGAAAAAGAACATCATCATATCCTCTTTATTTCTTTCAACCGTAATCTTTGCGCAGAACAAAGGTTTGGTTGCCAATTC AGAAAGTCCGTATTCGAAATTACAAAGTGTTGGTTTGCAAGATGTAAAATGGACAAACGGTTTTTGGAAAGAACAATTTG ATGTAGAAACCAAAAATACTTTGCCATATATGTGGGATTTGTATCATAACGATGAGATTTCGCATGCTTACAAAAACTTC GAAATTGCTGCAGGTTTAAGTAAAGGAACTTTTAAAGGGCCTTCGTTTCATGATGGTGATTTCTATAAGATTTTTGAAGG AATGGCAGCAACTTATGCCGTTACAAAAGACAAAAAACTCGATGCTGAAATGGATAAAGCGATTGCGCTTTTTGCGAAAG TACAGCGCAAAGACGGTTATATTCATACGCCGGTTTTAATTGATGAACGCTGGGGGACTTTAGGGCCAGAAGAAGTTAAA AAACAATTGGGTTTCGAAAAATACAATATGGGACATTTGATGACTGCAGCTTGTATTCATTATCGTGCCACAGGAAAAAC AAACTTTCTGAACATCGCAAAAGGTGTTGCCGATTTCTTGTATGATTTCTATAAAAAAGCTTCACCAGAATTGGCTCGAA ATGCCATTTGTCCGTCTCATTATATGGGAATTGTCGAAATGTACAGAACGACCAAAAATCCGAAATACTTAGAGTTGGCT AATAATTTAATTGATATTCGCGGAACCACAAATGACGGAACCGATGATAATCAAGATAGAGTGCCGTTTAGACAGCAAAC AACTGCAATGGGGCACGCTGTAAGAGCAAATTACCTTTATGCCGGAGTAGCCGATTTGTATGCAGAAACAGGAGAAAAGA AATTATTAGACAATTTAGAATCTATTTGGGATGATGTAACGTATCGTAAAATGTACATTACAGGGGGTTGTGGATCTTTA TATGACGGCGTTTCGCCAGACGGAACTTCTTATGATCCAACTGTAGTTCAGAAAATTCATCAGGCTTACGGAAGACCTTT TCAATTGCCAAATGCAACGGCTCATACCGAAACCTGTGCTAATATTGGAAATGTTTTATGGAATTGGAGAATGCTTCAAA TTACCGGAGATGCCAAATATGCTGATATTATAGAATTAGCTCTTTATAACAGTGTACTTTCTGGAATGGATTTAGAAGGA GAAAAATTCTTGTATAACAATCCGCTGAATGTTTCTAATGATTTGCCATTTCATCAACGTTGGGGGAATGAGCGTGAAGG ATATATTGCCTTATCCAACTGTTGTGCACCAAACGTAACGAGAACAATTGCTGAAGTTGGAAATTATGCTTACAATATTT CGAAAGAAGGTTTGTATGTGAATTTATATGGAAGTAATCAATTGAAAACAAAATCTTTAAACGGAGAAGAAATCGAAATT GAACAGCAAACCAATTATCCGTGGGACGGAAAAATAACTTTGAAAATTGTGAAAGCTCCAAAAGATTTACAAAATTTCTT TTTAAGAATTCCGGGTTGGAGTCAGAATGCTGAAATTTTGATAAACAATTCAAAAATTAATGATAAAATTGTTTCAGGAA CTTATTTGAAATTAAATCAGAAATGGAAAAAAGGAGATGTAATCGAATTGAATTTTCCAATGCCGGTTGAGTTAATGGAA GCGAATCCGTTGGTTGAAGAAGTTAAAAATCAGGTCGCTGTAAAAAGAGGACCTTTGGTATATTGCTTAGAATCTGATCA GCTTCCTGCGAAAGTAAGTGTAAATGATGTGGCTTTAAATTTGAAATCGAATTTCGCAACAAACAATTTCATATTGAATA ATAGAAATTTAGTAAGCATTGATGCTGAAGCCGTTATAAATTCAAATAATTCATGGAATAAAACGTTGTACAAACCGCTT TCTTCTAAAAATGCAGATGCTGTACAAGTAAAATTGATTCCGTATTTTGCATGGGGAAATAAAGGAAAAGGGGAGATGAC GGTTTGGATGTCGCACTAA
Upstream 100 bases:
>100_bases ATTTTATACTAAATAATCTGTGCTAATTCTTTTAATCTGTGGCAAAAAACTAATTCGTGGAAATTAGTCTAATTCGTGGC AAACAAAAAATAAATTCAAA
Downstream 100 bases:
>100_bases ATTTTGGACGCGGATGAAACGGATTGCCCTTGGCAAAACGCGGATTTAAACGGATTTTTAATTTTTGTCAAAGATATTAA TCGCTCAGTTTGTCATTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 672; Mature: 672
Protein sequence:
>672_residues MKKNIIISSLFLSTVIFAQNKGLVANSESPYSKLQSVGLQDVKWTNGFWKEQFDVETKNTLPYMWDLYHNDEISHAYKNF EIAAGLSKGTFKGPSFHDGDFYKIFEGMAATYAVTKDKKLDAEMDKAIALFAKVQRKDGYIHTPVLIDERWGTLGPEEVK KQLGFEKYNMGHLMTAACIHYRATGKTNFLNIAKGVADFLYDFYKKASPELARNAICPSHYMGIVEMYRTTKNPKYLELA NNLIDIRGTTNDGTDDNQDRVPFRQQTTAMGHAVRANYLYAGVADLYAETGEKKLLDNLESIWDDVTYRKMYITGGCGSL YDGVSPDGTSYDPTVVQKIHQAYGRPFQLPNATAHTETCANIGNVLWNWRMLQITGDAKYADIIELALYNSVLSGMDLEG EKFLYNNPLNVSNDLPFHQRWGNEREGYIALSNCCAPNVTRTIAEVGNYAYNISKEGLYVNLYGSNQLKTKSLNGEEIEI EQQTNYPWDGKITLKIVKAPKDLQNFFLRIPGWSQNAEILINNSKINDKIVSGTYLKLNQKWKKGDVIELNFPMPVELME ANPLVEEVKNQVAVKRGPLVYCLESDQLPAKVSVNDVALNLKSNFATNNFILNNRNLVSIDAEAVINSNNSWNKTLYKPL SSKNADAVQVKLIPYFAWGNKGKGEMTVWMSH
Sequences:
>Translated_672_residues MKKNIIISSLFLSTVIFAQNKGLVANSESPYSKLQSVGLQDVKWTNGFWKEQFDVETKNTLPYMWDLYHNDEISHAYKNF EIAAGLSKGTFKGPSFHDGDFYKIFEGMAATYAVTKDKKLDAEMDKAIALFAKVQRKDGYIHTPVLIDERWGTLGPEEVK KQLGFEKYNMGHLMTAACIHYRATGKTNFLNIAKGVADFLYDFYKKASPELARNAICPSHYMGIVEMYRTTKNPKYLELA NNLIDIRGTTNDGTDDNQDRVPFRQQTTAMGHAVRANYLYAGVADLYAETGEKKLLDNLESIWDDVTYRKMYITGGCGSL YDGVSPDGTSYDPTVVQKIHQAYGRPFQLPNATAHTETCANIGNVLWNWRMLQITGDAKYADIIELALYNSVLSGMDLEG EKFLYNNPLNVSNDLPFHQRWGNEREGYIALSNCCAPNVTRTIAEVGNYAYNISKEGLYVNLYGSNQLKTKSLNGEEIEI EQQTNYPWDGKITLKIVKAPKDLQNFFLRIPGWSQNAEILINNSKINDKIVSGTYLKLNQKWKKGDVIELNFPMPVELME ANPLVEEVKNQVAVKRGPLVYCLESDQLPAKVSVNDVALNLKSNFATNNFILNNRNLVSIDAEAVINSNNSWNKTLYKPL SSKNADAVQVKLIPYFAWGNKGKGEMTVWMSH >Mature_672_residues MKKNIIISSLFLSTVIFAQNKGLVANSESPYSKLQSVGLQDVKWTNGFWKEQFDVETKNTLPYMWDLYHNDEISHAYKNF EIAAGLSKGTFKGPSFHDGDFYKIFEGMAATYAVTKDKKLDAEMDKAIALFAKVQRKDGYIHTPVLIDERWGTLGPEEVK KQLGFEKYNMGHLMTAACIHYRATGKTNFLNIAKGVADFLYDFYKKASPELARNAICPSHYMGIVEMYRTTKNPKYLELA NNLIDIRGTTNDGTDDNQDRVPFRQQTTAMGHAVRANYLYAGVADLYAETGEKKLLDNLESIWDDVTYRKMYITGGCGSL YDGVSPDGTSYDPTVVQKIHQAYGRPFQLPNATAHTETCANIGNVLWNWRMLQITGDAKYADIIELALYNSVLSGMDLEG EKFLYNNPLNVSNDLPFHQRWGNEREGYIALSNCCAPNVTRTIAEVGNYAYNISKEGLYVNLYGSNQLKTKSLNGEEIEI EQQTNYPWDGKITLKIVKAPKDLQNFFLRIPGWSQNAEILINNSKINDKIVSGTYLKLNQKWKKGDVIELNFPMPVELME ANPLVEEVKNQVAVKRGPLVYCLESDQLPAKVSVNDVALNLKSNFATNNFILNNRNLVSIDAEAVINSNNSWNKTLYKPL SSKNADAVQVKLIPYFAWGNKGKGEMTVWMSH
Specific function: Unknown
COG id: COG3533
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75856; Mature: 75856
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNIIISSLFLSTVIFAQNKGLVANSESPYSKLQSVGLQDVKWTNGFWKEQFDVETKNT CCCCEEHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCCCC LPYMWDLYHNDEISHAYKNFEIAAGLSKGTFKGPSFHDGDFYKIFEGMAATYAVTKDKKL CCEEEEEECCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCC DAEMDKAIALFAKVQRKDGYIHTPVLIDERWGTLGPEEVKKQLGFEKYNMGHLMTAACIH CHHHHHHHHHHHHHHHCCCEEECCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHE YRATGKTNFLNIAKGVADFLYDFYKKASPELARNAICPSHYMGIVEMYRTTKNPKYLELA EECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEC NNLIDIRGTTNDGTDDNQDRVPFRQQTTAMGHAVRANYLYAGVADLYAETGEKKLLDNLE CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEHHHHHHHHHCCHHHHHHHHH SIWDDVTYRKMYITGGCGSLYDGVSPDGTSYDPTVVQKIHQAYGRPFQLPNATAHTETCA HHHCCCCEEEEEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH NIGNVLWNWRMLQITGDAKYADIIELALYNSVLSGMDLEGEKFLYNNPLNVSNDLPFHQR HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHH WGNEREGYIALSNCCAPNVTRTIAEVGNYAYNISKEGLYVNLYGSNQLKTKSLNGEEIEI CCCCCCCEEEEECCCCCCHHHHHHHHCCEEEEECCCCEEEEEECCCCEEEECCCCCEEEE EQQTNYPWDGKITLKIVKAPKDLQNFFLRIPGWSQNAEILINNSKINDKIVSGTYLKLNQ EECCCCCCCCEEEEEEECCCHHHHHHEEECCCCCCCCEEEEECCCCCCEEECCEEEEEEC KWKKGDVIELNFPMPVELMEANPLVEEVKNQVAVKRGPLVYCLESDQLPAKVSVNDVALN CCCCCCEEEECCCCCEEEECCCHHHHHHHHHHEEECCCEEEEECCCCCCCEEEEEEEEEE LKSNFATNNFILNNRNLVSIDAEAVINSNNSWNKTLYKPLSSKNADAVQVKLIPYFAWGN EECCCCCCCEEECCCCEEEEEHHEEECCCCCCCHHHHCCCCCCCCCEEEEEEEEEEEECC KGKGEMTVWMSH CCCCCEEEEEEC >Mature Secondary Structure MKKNIIISSLFLSTVIFAQNKGLVANSESPYSKLQSVGLQDVKWTNGFWKEQFDVETKNT CCCCEEHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCCCC LPYMWDLYHNDEISHAYKNFEIAAGLSKGTFKGPSFHDGDFYKIFEGMAATYAVTKDKKL CCEEEEEECCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCC DAEMDKAIALFAKVQRKDGYIHTPVLIDERWGTLGPEEVKKQLGFEKYNMGHLMTAACIH CHHHHHHHHHHHHHHHCCCEEECCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHE YRATGKTNFLNIAKGVADFLYDFYKKASPELARNAICPSHYMGIVEMYRTTKNPKYLELA EECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEC NNLIDIRGTTNDGTDDNQDRVPFRQQTTAMGHAVRANYLYAGVADLYAETGEKKLLDNLE CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEHHHHHHHHHCCHHHHHHHHH SIWDDVTYRKMYITGGCGSLYDGVSPDGTSYDPTVVQKIHQAYGRPFQLPNATAHTETCA HHHCCCCEEEEEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH NIGNVLWNWRMLQITGDAKYADIIELALYNSVLSGMDLEGEKFLYNNPLNVSNDLPFHQR HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHH WGNEREGYIALSNCCAPNVTRTIAEVGNYAYNISKEGLYVNLYGSNQLKTKSLNGEEIEI CCCCCCCEEEEECCCCCCHHHHHHHHCCEEEEECCCCEEEEEECCCCEEEECCCCCEEEE EQQTNYPWDGKITLKIVKAPKDLQNFFLRIPGWSQNAEILINNSKINDKIVSGTYLKLNQ EECCCCCCCCEEEEEEECCCHHHHHHEEECCCCCCCCEEEEECCCCCCEEECCEEEEEEC KWKKGDVIELNFPMPVELMEANPLVEEVKNQVAVKRGPLVYCLESDQLPAKVSVNDVALN CCCCCCEEEECCCCCEEEECCCHHHHHHHHHHEEECCCEEEEECCCCCCCEEEEEEEEEE LKSNFATNNFILNNRNLVSIDAEAVINSNNSWNKTLYKPLSSKNADAVQVKLIPYFAWGN EECCCCCCCEEECCCCEEEEEHHEEECCCCCCCHHHHCCCCCCCCCEEEEEEEEEEEECC KGKGEMTVWMSH CCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA