Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301818

Identifier: 146301818

GI number: 146301818

Start: 4882093

End: 4883661

Strand: Reverse

Name: 146301818

Synonym: Fjoh_4082

Alternate gene names: NA

Gene position: 4883661-4882093 (Counterclockwise)

Preceding gene: 146301819

Following gene: 146301817

Centisome position: 80.1

GC content: 35.5

Gene sequence:

>1569_bases
ATGTTACAACATTTTAAACATAAAATAATTACGCTTTCAGTTGTCGTTGCTTGTATAAACAGTGGTTGCAAATCGACTGT
GGAACATTCACAAAAAGGAAAATGGGTTATTTTAAAAGAAAAAAACTTCAAACATTATGTGGATTATTTCAACACAATGG
AAGATGAAAATTTGAAGTTTGCAATTCCGAATGACAGCGCTTGGGCTTGGATGGAAAAGAATATTCCGTTGTTTGAATGT
CCACAGCAGAATTTTGAGGAAATCTATTATTTCAGATGGTGGAGCGTTCGTAAACATATCAAAAATACACCACAGGGATT
TGCGATCACAGAGTTTTTAGTCGATCGTTCGTATGCCGATAAATACAATATGATTAGTTGTGCTTTGGGGCATCATATCA
ACGAATTCAGATGGGTTCATGATCCGAAATATATCGAGCAGGATGTGAAACTTTGGTACCGAGGAAATGATGGAAAACCA
ATGAACAAATTGTATAAATTCAGCAGTTGGACAGCCGATGCTTTATATAATCGTTATTTGGTGAATAAAGATGAAAAATT
CTTATTGGATTTATATCCAGACATGGTTACAGATTATGCCGTTTGGGAAAAAGACCGTCAGCGTAAAGATGGTTTGTTTT
GGCAACATGATGTGAAAGATGGAATGGAAGAATCCTTAAGTGGTGGGCGTAAAGTACAAAATGCAAGACCAACGATAAAC
AGTTATATGTACGGGAATGCTATGGCAATTTCTAAAATGGCTGAATTGAAAGGTGATAAGGAAGCAGAAAACAAATTCAA
AGCGAAAGCTGATGTTCTGCAAAAATTAGTAGAAACCAAATTATGGAATCAGAAAAGCGAATTTTTTGAAACTTTAACAG
AAAAAGATACTTTAGCACAAGTTCGAGAAGCAATAGGATTTATTCCTTGGTATTTTAATCTTCCTGAAAAAGGTAAAGGT
TTTGAAAAAGCCTGGGAACAGATTAAGGATGAAAAAGGATTTTCGGCTCCGTTTGGTTTGACAACGGCTGAAAGAAGAAG
TCCAAGATTTAGAACACACGGAACAGGAACCTGCGAATGGGACGGCGCGATTTGGCCATTTGCAAGTTCGCAGACGTTAA
CGGCTTTAGGTAATGTTTTGAATAATTACAATCAGAACTTTGTAGCCAAACCCGATTATTTCAAACAGATGGAATTGTAT
GTTCAATCACAATATTATAGAGGAAAACCTTATCTTGGCGAGTATTTGGATGAAACAACGGGTTATTGGTTAATGGGAGA
CAAAGAAAGAAGCCGTTATTATAATCATTCGACTTTTAATGATTTGGTGATTACAGGATTGATTGGTTTACGTCCGAGAG
CAGATGAAAAGATAGAAGTAAATCCGTTGATTCCACAAGAAAAATGGGATTGGTTTTGTCTTGACAATGTTCTGTATCAC
GGCAATATTATTACCATTCTTTGGGATAAAACAGGAGAAAAATATAAAAAAGGAAAAGGTTTTAGAATCTTTAAAAACGG
AAAGGAAATTGCAGTTTCTGAGAAATTGGAGCGTGTGATTTCAAATTAG

Upstream 100 bases:

>100_bases
TCCGCAAAATGAGTCGCCAATCTTTGTCAAATTTCTAACGAAGATTTCTCCTTCGTCGAAATGGCAAGATTGAGTAAAAA
GAATAAAATAAAAACAGAAT

Downstream 100 bases:

>100_bases
TTATAAACCCAACAGGTTTTTAAAACCTGTCGGGTTTGATACGCTAATAAGTTGATTTAGTTAAGAATAAAATTTGGAGA
AAACAGTATTAAGTTATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MLQHFKHKIITLSVVVACINSGCKSTVEHSQKGKWVILKEKNFKHYVDYFNTMEDENLKFAIPNDSAWAWMEKNIPLFEC
PQQNFEEIYYFRWWSVRKHIKNTPQGFAITEFLVDRSYADKYNMISCALGHHINEFRWVHDPKYIEQDVKLWYRGNDGKP
MNKLYKFSSWTADALYNRYLVNKDEKFLLDLYPDMVTDYAVWEKDRQRKDGLFWQHDVKDGMEESLSGGRKVQNARPTIN
SYMYGNAMAISKMAELKGDKEAENKFKAKADVLQKLVETKLWNQKSEFFETLTEKDTLAQVREAIGFIPWYFNLPEKGKG
FEKAWEQIKDEKGFSAPFGLTTAERRSPRFRTHGTGTCEWDGAIWPFASSQTLTALGNVLNNYNQNFVAKPDYFKQMELY
VQSQYYRGKPYLGEYLDETTGYWLMGDKERSRYYNHSTFNDLVITGLIGLRPRADEKIEVNPLIPQEKWDWFCLDNVLYH
GNIITILWDKTGEKYKKGKGFRIFKNGKEIAVSEKLERVISN

Sequences:

>Translated_522_residues
MLQHFKHKIITLSVVVACINSGCKSTVEHSQKGKWVILKEKNFKHYVDYFNTMEDENLKFAIPNDSAWAWMEKNIPLFEC
PQQNFEEIYYFRWWSVRKHIKNTPQGFAITEFLVDRSYADKYNMISCALGHHINEFRWVHDPKYIEQDVKLWYRGNDGKP
MNKLYKFSSWTADALYNRYLVNKDEKFLLDLYPDMVTDYAVWEKDRQRKDGLFWQHDVKDGMEESLSGGRKVQNARPTIN
SYMYGNAMAISKMAELKGDKEAENKFKAKADVLQKLVETKLWNQKSEFFETLTEKDTLAQVREAIGFIPWYFNLPEKGKG
FEKAWEQIKDEKGFSAPFGLTTAERRSPRFRTHGTGTCEWDGAIWPFASSQTLTALGNVLNNYNQNFVAKPDYFKQMELY
VQSQYYRGKPYLGEYLDETTGYWLMGDKERSRYYNHSTFNDLVITGLIGLRPRADEKIEVNPLIPQEKWDWFCLDNVLYH
GNIITILWDKTGEKYKKGKGFRIFKNGKEIAVSEKLERVISN
>Mature_522_residues
MLQHFKHKIITLSVVVACINSGCKSTVEHSQKGKWVILKEKNFKHYVDYFNTMEDENLKFAIPNDSAWAWMEKNIPLFEC
PQQNFEEIYYFRWWSVRKHIKNTPQGFAITEFLVDRSYADKYNMISCALGHHINEFRWVHDPKYIEQDVKLWYRGNDGKP
MNKLYKFSSWTADALYNRYLVNKDEKFLLDLYPDMVTDYAVWEKDRQRKDGLFWQHDVKDGMEESLSGGRKVQNARPTIN
SYMYGNAMAISKMAELKGDKEAENKFKAKADVLQKLVETKLWNQKSEFFETLTEKDTLAQVREAIGFIPWYFNLPEKGKG
FEKAWEQIKDEKGFSAPFGLTTAERRSPRFRTHGTGTCEWDGAIWPFASSQTLTALGNVLNNYNQNFVAKPDYFKQMELY
VQSQYYRGKPYLGEYLDETTGYWLMGDKERSRYYNHSTFNDLVITGLIGLRPRADEKIEVNPLIPQEKWDWFCLDNVLYH
GNIITILWDKTGEKYKKGKGFRIFKNGKEIAVSEKLERVISN

Specific function: Unknown

COG id: COG1626

COG function: function code G; Neutral trehalase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61505; Mature: 61505

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQHFKHKIITLSVVVACINSGCKSTVEHSQKGKWVILKEKNFKHYVDYFNTMEDENLKF
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCEE
AIPNDSAWAWMEKNIPLFECPQQNFEEIYYFRWWSVRKHIKNTPQGFAITEFLVDRSYAD
ECCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
KYNMISCALGHHINEFRWVHDPKYIEQDVKLWYRGNDGKPMNKLYKFSSWTADALYNRYL
CCCHHHHHHHCCHHHHEECCCHHHHHHCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHH
VNKDEKFLLDLYPDMVTDYAVWEKDRQRKDGLFWQHDVKDGMEESLSGGRKVQNARPTIN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCCHH
SYMYGNAMAISKMAELKGDKEAENKFKAKADVLQKLVETKLWNQKSEFFETLTEKDTLAQ
HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHH
VREAIGFIPWYFNLPEKGKGFEKAWEQIKDEKGFSAPFGLTTAERRSPRFRTHGTGTCEW
HHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCEEEE
DGAIWPFASSQTLTALGNVLNNYNQNFVAKPDYFKQMELYVQSQYYRGKPYLGEYLDETT
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
GYWLMGDKERSRYYNHSTFNDLVITGLIGLRPRADEKIEVNPLIPQEKWDWFCLDNVLYH
CEEEECCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEECCEEEC
GNIITILWDKTGEKYKKGKGFRIFKNGKEIAVSEKLERVISN
CCEEEEEECCCCCHHHCCCCEEEEECCCEEHHHHHHHHHHCC
>Mature Secondary Structure
MLQHFKHKIITLSVVVACINSGCKSTVEHSQKGKWVILKEKNFKHYVDYFNTMEDENLKF
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCEE
AIPNDSAWAWMEKNIPLFECPQQNFEEIYYFRWWSVRKHIKNTPQGFAITEFLVDRSYAD
ECCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
KYNMISCALGHHINEFRWVHDPKYIEQDVKLWYRGNDGKPMNKLYKFSSWTADALYNRYL
CCCHHHHHHHCCHHHHEECCCHHHHHHCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHH
VNKDEKFLLDLYPDMVTDYAVWEKDRQRKDGLFWQHDVKDGMEESLSGGRKVQNARPTIN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCCHH
SYMYGNAMAISKMAELKGDKEAENKFKAKADVLQKLVETKLWNQKSEFFETLTEKDTLAQ
HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHH
VREAIGFIPWYFNLPEKGKGFEKAWEQIKDEKGFSAPFGLTTAERRSPRFRTHGTGTCEW
HHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCEEEE
DGAIWPFASSQTLTALGNVLNNYNQNFVAKPDYFKQMELYVQSQYYRGKPYLGEYLDETT
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
GYWLMGDKERSRYYNHSTFNDLVITGLIGLRPRADEKIEVNPLIPQEKWDWFCLDNVLYH
CEEEECCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEECCEEEC
GNIITILWDKTGEKYKKGKGFRIFKNGKEIAVSEKLERVISN
CCEEEEEECCCCCHHHCCCCEEEEECCCEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA