Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301813

Identifier: 146301813

GI number: 146301813

Start: 4874913

End: 4875815

Strand: Reverse

Name: 146301813

Synonym: Fjoh_4077

Alternate gene names: NA

Gene position: 4875815-4874913 (Counterclockwise)

Preceding gene: 146301814

Following gene: 146301812

Centisome position: 79.97

GC content: 35.44

Gene sequence:

>903_bases
ATGGTAAAACCAATTAACATGAAGCTAAATAAAAATTTAATTGTTGTATTGTTTGTTACTTTATCAACGACATTTAATAG
CTGTGCAACGGCGCAGTCTTCCAATAAAAAGCAAAAATACAAAGTTGCTGTTTGTGACTGGATGATTTTAAAAAGACAAA
AATTAGGTGCTTTTGGTTTAGCAGCTGAAATAAAAGCTGACGGAATCGAACTCGATATGGGAGGTTTAGGAAACAGACCA
ACTTTTGATAGCAAACTAGGCGACCCAGTTGAAAGACAAAAATTCCTAGATAAATCAAAAGGAACAGGAGTTGGAATAAG
CTCAATTGCGATGTCTGGATTTTATGCACAGTCTTTTGCCACAAGAGAAATCACACCAATGATTGCAGATTGTATCAAAG
CTATGAAAGACATGAAGGTAAAAGTGGCTTATCTTCCGTTAGGAACACAAACCGATTTAGTTAAAAATCCGGAGTTACGT
CCAGAAGTAATTAAAAGACTACAATGGGCAGGAAAAGAAGTGGGGAAAATAGGTGGTGTAATTGCGATTGAAACCTCTTT
GGACGCGACAGAAGAGAAAAAACTTTTAGATGAAGTCGGTTCAAAATATATTAAAAGCTCTTTCAATTTTGCGAATGCTT
TAGATAATAAAAGAGATATTTCATCAGAATTGAAAATATTAGGAAAGAAATACGTAGCACAAATTCACGCTTCCAACACC
GATCAGTTTTGGTTAGAAAATGACAAAGCGATCGACATGCCAAAAATCAAACAAACTTTGGATGAAATGAAATGGAGCGG
ATGGCTAATTGTTGAGCGTTCTCGCGACGTGACACAAGTACATAATGTTAAAGCCAATTATGGAGCAAACGTGGCTTATT
TGAAGAAAATTTTCCAGAATTAA

Upstream 100 bases:

>100_bases
GTATCTATTTATTCTTTTAAAAAGAACATTAAGCTTAATTTTCTTCATCTTCTAATGATAATAATAAAAAGTATTGAAGC
TTAATTTCCTTAATGCCTTA

Downstream 100 bases:

>100_bases
ACAATAAACAGTGATCAATATGTAATCGTTAAACAACACAATTTTTCACTATAAATCTGCCGAATTTGCTAAATCTGCGA
GAGATATTTTTCACGCAGAT

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MVKPINMKLNKNLIVVLFVTLSTTFNSCATAQSSNKKQKYKVAVCDWMILKRQKLGAFGLAAEIKADGIELDMGGLGNRP
TFDSKLGDPVERQKFLDKSKGTGVGISSIAMSGFYAQSFATREITPMIADCIKAMKDMKVKVAYLPLGTQTDLVKNPELR
PEVIKRLQWAGKEVGKIGGVIAIETSLDATEEKKLLDEVGSKYIKSSFNFANALDNKRDISSELKILGKKYVAQIHASNT
DQFWLENDKAIDMPKIKQTLDEMKWSGWLIVERSRDVTQVHNVKANYGANVAYLKKIFQN

Sequences:

>Translated_300_residues
MVKPINMKLNKNLIVVLFVTLSTTFNSCATAQSSNKKQKYKVAVCDWMILKRQKLGAFGLAAEIKADGIELDMGGLGNRP
TFDSKLGDPVERQKFLDKSKGTGVGISSIAMSGFYAQSFATREITPMIADCIKAMKDMKVKVAYLPLGTQTDLVKNPELR
PEVIKRLQWAGKEVGKIGGVIAIETSLDATEEKKLLDEVGSKYIKSSFNFANALDNKRDISSELKILGKKYVAQIHASNT
DQFWLENDKAIDMPKIKQTLDEMKWSGWLIVERSRDVTQVHNVKANYGANVAYLKKIFQN
>Mature_300_residues
MVKPINMKLNKNLIVVLFVTLSTTFNSCATAQSSNKKQKYKVAVCDWMILKRQKLGAFGLAAEIKADGIELDMGGLGNRP
TFDSKLGDPVERQKFLDKSKGTGVGISSIAMSGFYAQSFATREITPMIADCIKAMKDMKVKVAYLPLGTQTDLVKNPELR
PEVIKRLQWAGKEVGKIGGVIAIETSLDATEEKKLLDEVGSKYIKSSFNFANALDNKRDISSELKILGKKYVAQIHASNT
DQFWLENDKAIDMPKIKQTLDEMKWSGWLIVERSRDVTQVHNVKANYGANVAYLKKIFQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33434; Mature: 33434

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKPINMKLNKNLIVVLFVTLSTTFNSCATAQSSNKKQKYKVAVCDWMILKRQKLGAFGL
CCCCCCEEECCCEEEEEEEEHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCCCE
AAEIKADGIELDMGGLGNRPTFDSKLGDPVERQKFLDKSKGTGVGISSIAMSGFYAQSFA
EEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
TREITPMIADCIKAMKDMKVKVAYLPLGTQTDLVKNPELRPEVIKRLQWAGKEVGKIGGV
CHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCE
IAIETSLDATEEKKLLDEVGSKYIKSSFNFANALDNKRDISSELKILGKKYVAQIHASNT
EEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
DQFWLENDKAIDMPKIKQTLDEMKWSGWLIVERSRDVTQVHNVKANYGANVAYLKKIFQN
CCEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MVKPINMKLNKNLIVVLFVTLSTTFNSCATAQSSNKKQKYKVAVCDWMILKRQKLGAFGL
CCCCCCEEECCCEEEEEEEEHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCCCE
AAEIKADGIELDMGGLGNRPTFDSKLGDPVERQKFLDKSKGTGVGISSIAMSGFYAQSFA
EEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
TREITPMIADCIKAMKDMKVKVAYLPLGTQTDLVKNPELRPEVIKRLQWAGKEVGKIGGV
CHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCE
IAIETSLDATEEKKLLDEVGSKYIKSSFNFANALDNKRDISSELKILGKKYVAQIHASNT
EEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
DQFWLENDKAIDMPKIKQTLDEMKWSGWLIVERSRDVTQVHNVKANYGANVAYLKKIFQN
CCEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA