Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301809

Identifier: 146301809

GI number: 146301809

Start: 4864215

End: 4865426

Strand: Reverse

Name: 146301809

Synonym: Fjoh_4073

Alternate gene names: NA

Gene position: 4865426-4864215 (Counterclockwise)

Preceding gene: 146301810

Following gene: 146301802

Centisome position: 79.8

GC content: 31.27

Gene sequence:

>1212_bases
ATGATTTGTACAATTTATTCGCATCATTTAGGACTGGAAAAAATCAAACAAATATTTCTTTCTCATGTTCCTAATGGTGT
TTTTTCTACTAATGGTGAAAACCTCGAATTTGAAGTGAAAGGTGGAATCTTAAGTCCATCAAAAAAAGTAACTATCTTTT
ACAGAGAAAGAGCTATTCCTTCCTACCAAATTCCGCAAATAGACGATTCTGAGTTAACTGCCAATTTGAAGGGCTTGTAT
GGTTTTGTAGATTCGTTACCAACTGAAAATGAAAAGGTAAAAGGGGTATTTCTTCGTAAAATACAAACATTGAATTCTGA
ATTTTCGATTCGTGAAGACAAGGGAGAATTAAAAGAATTAGACATCATTATAGCCGATCTTGCAAAAGAATTTGATGCAG
TTTTATTTGTTCAGCCAAATACTATAATAAGTAAATCTGAAACGCAGCATTTTTTAGATAAAGATTTAAATCTAATTATT
GATTCAGAAGGGAGAAGTGAAATTGAAGAATTAAAAGTTAATATCAATTCGGAATATTTTGACAATGATCAGACAGAATT
AGAAGAAGATCAAATAGAAAGAAAAGCTAAAAACGAAGAAATTCTTGAAAGAGAAAATATAAAAATCAACAATAATTTAC
CTTATATTGAATCGGAAAGAGAAACTACAATTCGATCAGCAAAAGAAGTTGCACAAAGAGTTAGCGTTTTGGCAGTAACT
AATTATGTAGCATTTAATAATATCTCTCCTGAAGAAGCTGTTGATTATTTACAAAATTATAATCTATGGGATTTTACAAC
CGATGTTGAAAAGGAATTTCTTGCCAATCCTACTGAAAGTAGAAAAATACATGAAACATGGAAATGCGAAGGAATTTGGA
CTTTAATGTGGGCTTTGAAAAAAGTCGCTAGACTTGATTTTCCAAATGAGTTTTGTGATCTTGGAAATATCAATGCAGAA
GATTATCCTGTTGCAAAAGACAAAGATCCTTTTGAATTTATAAATGCAGTTCATGAGGTTCGCTCTAAAAAAGAAATTTT
AGATGCTGCAGATTTGTATTATCGTTATAATTGGGCTTGTGTTGATGCAAGAATTAACGGAAAACAAATTGAGGCAATAA
ATCCAGGAATTGTTTACGAAAGGCAATACGCCCTAAACTGGCTTATAAATTATATGGATCAGGATTGGGATGATGTTACC
TGTGATACCTAA

Upstream 100 bases:

>100_bases
TTTCAAACTAGATGCGGATTTTTTGTTTTTAGCTCATTCAGAATATTTATTTTTTTGTAGAATTAAACTTATATTTGTCT
CGTAATATAAAAGCCGAAAA

Downstream 100 bases:

>100_bases
TAAAATAAAAAAAACATTCCGCTCCAAAAACTGAAGCGGAATGTCACCATTAAAAAAAAATCAAGAATTATCGCTATAAC
TCAAGTTATCGTTTTTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MICTIYSHHLGLEKIKQIFLSHVPNGVFSTNGENLEFEVKGGILSPSKKVTIFYRERAIPSYQIPQIDDSELTANLKGLY
GFVDSLPTENEKVKGVFLRKIQTLNSEFSIREDKGELKELDIIIADLAKEFDAVLFVQPNTIISKSETQHFLDKDLNLII
DSEGRSEIEELKVNINSEYFDNDQTELEEDQIERKAKNEEILERENIKINNNLPYIESERETTIRSAKEVAQRVSVLAVT
NYVAFNNISPEEAVDYLQNYNLWDFTTDVEKEFLANPTESRKIHETWKCEGIWTLMWALKKVARLDFPNEFCDLGNINAE
DYPVAKDKDPFEFINAVHEVRSKKEILDAADLYYRYNWACVDARINGKQIEAINPGIVYERQYALNWLINYMDQDWDDVT
CDT

Sequences:

>Translated_403_residues
MICTIYSHHLGLEKIKQIFLSHVPNGVFSTNGENLEFEVKGGILSPSKKVTIFYRERAIPSYQIPQIDDSELTANLKGLY
GFVDSLPTENEKVKGVFLRKIQTLNSEFSIREDKGELKELDIIIADLAKEFDAVLFVQPNTIISKSETQHFLDKDLNLII
DSEGRSEIEELKVNINSEYFDNDQTELEEDQIERKAKNEEILERENIKINNNLPYIESERETTIRSAKEVAQRVSVLAVT
NYVAFNNISPEEAVDYLQNYNLWDFTTDVEKEFLANPTESRKIHETWKCEGIWTLMWALKKVARLDFPNEFCDLGNINAE
DYPVAKDKDPFEFINAVHEVRSKKEILDAADLYYRYNWACVDARINGKQIEAINPGIVYERQYALNWLINYMDQDWDDVT
CDT
>Mature_403_residues
MICTIYSHHLGLEKIKQIFLSHVPNGVFSTNGENLEFEVKGGILSPSKKVTIFYRERAIPSYQIPQIDDSELTANLKGLY
GFVDSLPTENEKVKGVFLRKIQTLNSEFSIREDKGELKELDIIIADLAKEFDAVLFVQPNTIISKSETQHFLDKDLNLII
DSEGRSEIEELKVNINSEYFDNDQTELEEDQIERKAKNEEILERENIKINNNLPYIESERETTIRSAKEVAQRVSVLAVT
NYVAFNNISPEEAVDYLQNYNLWDFTTDVEKEFLANPTESRKIHETWKCEGIWTLMWALKKVARLDFPNEFCDLGNINAE
DYPVAKDKDPFEFINAVHEVRSKKEILDAADLYYRYNWACVDARINGKQIEAINPGIVYERQYALNWLINYMDQDWDDVT
CDT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46740; Mature: 46740

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICTIYSHHLGLEKIKQIFLSHVPNGVFSTNGENLEFEVKGGILSPSKKVTIFYRERAIP
CEEEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEECCCCEEEEEEECCCCC
SYQIPQIDDSELTANLKGLYGFVDSLPTENEKVKGVFLRKIQTLNSEFSIREDKGELKEL
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHH
DIIIADLAKEFDAVLFVQPNTIISKSETQHFLDKDLNLIIDSEGRSEIEELKVNINSEYF
HHHHHHHHHHCCEEEEECCCCEECCCHHHHHHHCCCEEEEECCCHHHHHHHHEECCCCCC
DNDQTELEEDQIERKAKNEEILERENIKINNNLPYIESERETTIRSAKEVAQRVSVLAVT
CCCCHHHHHHHHHHHHCCHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NYVAFNNISPEEAVDYLQNYNLWDFTTDVEKEFLANPTESRKIHETWKCEGIWTLMWALK
HHHEECCCCHHHHHHHHHCCCCCEECCHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHH
KVARLDFPNEFCDLGNINAEDYPVAKDKDPFEFINAVHEVRSKKEILDAADLYYRYNWAC
HHHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
VDARINGKQIEAINPGIVYERQYALNWLINYMDQDWDDVTCDT
EEEEECCCEEEEECCCEEEEHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MICTIYSHHLGLEKIKQIFLSHVPNGVFSTNGENLEFEVKGGILSPSKKVTIFYRERAIP
CEEEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEECCCCEEEEEEECCCCC
SYQIPQIDDSELTANLKGLYGFVDSLPTENEKVKGVFLRKIQTLNSEFSIREDKGELKEL
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHH
DIIIADLAKEFDAVLFVQPNTIISKSETQHFLDKDLNLIIDSEGRSEIEELKVNINSEYF
HHHHHHHHHHCCEEEEECCCCEECCCHHHHHHHCCCEEEEECCCHHHHHHHHEECCCCCC
DNDQTELEEDQIERKAKNEEILERENIKINNNLPYIESERETTIRSAKEVAQRVSVLAVT
CCCCHHHHHHHHHHHHCCHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NYVAFNNISPEEAVDYLQNYNLWDFTTDVEKEFLANPTESRKIHETWKCEGIWTLMWALK
HHHEECCCCHHHHHHHHHCCCCCEECCHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHH
KVARLDFPNEFCDLGNINAEDYPVAKDKDPFEFINAVHEVRSKKEILDAADLYYRYNWAC
HHHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
VDARINGKQIEAINPGIVYERQYALNWLINYMDQDWDDVTCDT
EEEEECCCEEEEECCCEEEEHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA