| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is nhaK [H]
Identifier: 146301798
GI number: 146301798
Start: 4847536
End: 4849137
Strand: Reverse
Name: nhaK [H]
Synonym: Fjoh_4062
Alternate gene names: 146301798
Gene position: 4849137-4847536 (Counterclockwise)
Preceding gene: 146301801
Following gene: 146301790
Centisome position: 79.53
GC content: 36.52
Gene sequence:
>1602_bases ATGGAAAATATCACAGTAATTATAATGTTACTCTTTGGCGTAGCTTTTCTTAGTTTAATAAGTAAAAGATATAATTTTCC AATTCCTATTGTTTTGGTAATGTGCGGTGTAATTATCAGCGTTATTCCGGGACTTCCAGTAATAGCACTGAGCCCGGAAA TTGTTTTTATTATCTTTTTGCCGCCTCTTTTATATCATGCAGCATGGCATACAAGCTGGTCCGATTTTAAACAAACCATA CGTCCCATAACTTTAGCAGCTGTTGGTTTGGTTTTTTTTACTACAGGTTTGGTCGCTGTTGTGGCGCACTGGCTTATAGA TGATATTTCCTGGCCGTTAGCTTTTTTACTTGGTGCTATTGTATCGCCTCCAGATGCGGTTTCGGCAACAGCCATTACTA AAGGTTTAGGGCTGCATCCCAGATTAATTGCCATTCTAGAAGGAGAAAGTCTTGTAAATGACGCCAGTGGTCTTGTTGCT TACAAATATGCACTTACGGCTATTACAGCAGGAAATTTCGTTTTATGGCAGGCAGGATTAAACTTTGTTTTAATGTCGGT TCTAGGTATTGCAGTAGGTTTGGCAGTAGGTTTTATCATGTATTACATTCATAAAAAATTTGTCTGCGATGACATTATCG AAGTAACGCTTACATTACTGACACCCTTTGCATCGTATTTAATTGCAGAACATTTTCATGGTTCAGGAGTTTTAGCGGTA GTTGCAACAGGTCTTTTTTTAGCGGCAAGAACAGGAGCTATTTTTTCTCATGAAAGCCGAATCATGACCAATACTATATG GGATGTTTTAAATAACATTCTCAACGGATTAATTTTTATTTTAATTGGTCTTCAGCTGCGCCAGATTATGGATGGAATCA GCAATTACTCAGGGAATGCTTTATTTATCTGGGGATCAGTAATTAGTATTGTAGTTATTGTTGTTCGTTTTTTATGGGTG ATTCCTGCTACTGTGATTCCTAGAATGTTAAGTAAAAGAATCCGGGAAAAAGAAGAATTTGATTATCGAAACATGATTGT TTTTGGCTGGTCTGGTATGCGCGGTGTGGTTTCGATGGCAGCTGCTCTGGCACTTCCGTTAATGTTGAATAAAACAGAAG AATTTCCGCTTCGTAATTTAATTATATATTTGGTTTTCTGTGTAATATTGTCAACATTGGTTATTCAGGGACTTACACTT CCGTGGCTTATTAAAAAACTCAAAATAGAACGCTATTCTATTTTAGCAGAAGAATATAATGTCCGCAACGTAATCGTTTC TGAAACCATTTCGCATATTGAAGATAATTTCTCTTTATTAGATGATGAATTACTGCATAACATTAAGAGCAAATACGAAG TAAAATTTAACCGTTTGCAAAAAACAGAACTTCCGGCTAACTTTTTTGGAAACGGAAAAGTATTAGACGGCCAGATTTTT AATGAGTTTACGAGAGTTCAAATCGATCTTTTGAATGTTGAGCGCAGTAAACTTGAGAGCATGCACAAAAAAGGTTCTGT AAACGAAGAAATTTTCCGTAAAATAGAAAAAGAACTCGATCTGGAAGAAACGCGTCTTTGGATGGAAATGTACGAGGAGT AG
Upstream 100 bases:
>100_bases GGATATACTTTTTTAGTGTTATTCTAATTTAATTATCATAAAATCTTAATTTAGTACCCAGAAATTATAATCCTAAACAA TAAAATACCCGCAGTAAAAA
Downstream 100 bases:
>100_bases CATTTCTTGGATTCTTATAAATGATAGTAATAATTATGTAATTGTATTGACTGCCAGTTTTTTAAATTTGGAATATTAAG TTGAATACAAACAGTAAAAA
Product: Na+/H+ antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MENITVIIMLLFGVAFLSLISKRYNFPIPIVLVMCGVIISVIPGLPVIALSPEIVFIIFLPPLLYHAAWHTSWSDFKQTI RPITLAAVGLVFFTTGLVAVVAHWLIDDISWPLAFLLGAIVSPPDAVSATAITKGLGLHPRLIAILEGESLVNDASGLVA YKYALTAITAGNFVLWQAGLNFVLMSVLGIAVGLAVGFIMYYIHKKFVCDDIIEVTLTLLTPFASYLIAEHFHGSGVLAV VATGLFLAARTGAIFSHESRIMTNTIWDVLNNILNGLIFILIGLQLRQIMDGISNYSGNALFIWGSVISIVVIVVRFLWV IPATVIPRMLSKRIREKEEFDYRNMIVFGWSGMRGVVSMAAALALPLMLNKTEEFPLRNLIIYLVFCVILSTLVIQGLTL PWLIKKLKIERYSILAEEYNVRNVIVSETISHIEDNFSLLDDELLHNIKSKYEVKFNRLQKTELPANFFGNGKVLDGQIF NEFTRVQIDLLNVERSKLESMHKKGSVNEEIFRKIEKELDLEETRLWMEMYEE
Sequences:
>Translated_533_residues MENITVIIMLLFGVAFLSLISKRYNFPIPIVLVMCGVIISVIPGLPVIALSPEIVFIIFLPPLLYHAAWHTSWSDFKQTI RPITLAAVGLVFFTTGLVAVVAHWLIDDISWPLAFLLGAIVSPPDAVSATAITKGLGLHPRLIAILEGESLVNDASGLVA YKYALTAITAGNFVLWQAGLNFVLMSVLGIAVGLAVGFIMYYIHKKFVCDDIIEVTLTLLTPFASYLIAEHFHGSGVLAV VATGLFLAARTGAIFSHESRIMTNTIWDVLNNILNGLIFILIGLQLRQIMDGISNYSGNALFIWGSVISIVVIVVRFLWV IPATVIPRMLSKRIREKEEFDYRNMIVFGWSGMRGVVSMAAALALPLMLNKTEEFPLRNLIIYLVFCVILSTLVIQGLTL PWLIKKLKIERYSILAEEYNVRNVIVSETISHIEDNFSLLDDELLHNIKSKYEVKFNRLQKTELPANFFGNGKVLDGQIF NEFTRVQIDLLNVERSKLESMHKKGSVNEEIFRKIEKELDLEETRLWMEMYEE >Mature_533_residues MENITVIIMLLFGVAFLSLISKRYNFPIPIVLVMCGVIISVIPGLPVIALSPEIVFIIFLPPLLYHAAWHTSWSDFKQTI RPITLAAVGLVFFTTGLVAVVAHWLIDDISWPLAFLLGAIVSPPDAVSATAITKGLGLHPRLIAILEGESLVNDASGLVA YKYALTAITAGNFVLWQAGLNFVLMSVLGIAVGLAVGFIMYYIHKKFVCDDIIEVTLTLLTPFASYLIAEHFHGSGVLAV VATGLFLAARTGAIFSHESRIMTNTIWDVLNNILNGLIFILIGLQLRQIMDGISNYSGNALFIWGSVISIVVIVVRFLWV IPATVIPRMLSKRIREKEEFDYRNMIVFGWSGMRGVVSMAAALALPLMLNKTEEFPLRNLIIYLVFCVILSTLVIQGLTL PWLIKKLKIERYSILAEEYNVRNVIVSETISHIEDNFSLLDDELLHNIKSKYEVKFNRLQKTELPANFFGNGKVLDGQIF NEFTRVQIDLLNVERSKLESMHKKGSVNEEIFRKIEKELDLEETRLWMEMYEE
Specific function: Transporter involved in the efflux of sodium, potassium, lithium and rubidium [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. Nhak (TC 2.A.36.3.2) subfamily [H]
Homologues:
Organism=Homo sapiens, GI27734935, Length=406, Percent_Identity=26.1083743842365, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI15529998, Length=443, Percent_Identity=22.5733634311512, Blast_Score=97, Evalue=6e-20, Organism=Homo sapiens, GI27777632, Length=515, Percent_Identity=22.7184466019417, Blast_Score=90, Evalue=6e-18, Organism=Homo sapiens, GI14211919, Length=395, Percent_Identity=25.8227848101266, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI4759144, Length=384, Percent_Identity=27.6041666666667, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI5454070, Length=369, Percent_Identity=27.10027100271, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI294997330, Length=340, Percent_Identity=27.0588235294118, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI110227626, Length=343, Percent_Identity=27.1137026239067, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI148727259, Length=454, Percent_Identity=23.1277533039648, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI194239733, Length=425, Percent_Identity=25.8823529411765, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI41872703, Length=430, Percent_Identity=24.1860465116279, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI1790501, Length=556, Percent_Identity=28.4172661870504, Blast_Score=182, Evalue=3e-47, Organism=Caenorhabditis elegans, GI25147678, Length=497, Percent_Identity=24.5472837022133, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71980847, Length=406, Percent_Identity=23.6453201970443, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71992101, Length=381, Percent_Identity=25.9842519685039, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI71992107, Length=381, Percent_Identity=25.9842519685039, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI71993590, Length=419, Percent_Identity=23.6276849642005, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71993582, Length=419, Percent_Identity=23.6276849642005, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71990924, Length=404, Percent_Identity=23.7623762376238, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71990932, Length=404, Percent_Identity=23.7623762376238, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71987559, Length=406, Percent_Identity=22.4137931034483, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71987545, Length=404, Percent_Identity=22.2772277227723, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI25150332, Length=406, Percent_Identity=22.1674876847291, Blast_Score=76, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6320663, Length=357, Percent_Identity=25.4901960784314, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI221473212, Length=414, Percent_Identity=25.3623188405797, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI221473215, Length=403, Percent_Identity=25.3101736972705, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI281364513, Length=377, Percent_Identity=25.9946949602122, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI221473222, Length=377, Percent_Identity=25.9946949602122, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI281360447, Length=438, Percent_Identity=26.027397260274, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI221510734, Length=431, Percent_Identity=23.2018561484919, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI221510738, Length=431, Percent_Identity=23.2018561484919, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI221510736, Length=431, Percent_Identity=23.2018561484919, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI221510732, Length=431, Percent_Identity=23.2018561484919, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24585580, Length=431, Percent_Identity=23.2018561484919, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24585578, Length=431, Percent_Identity=23.2018561484919, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI221510740, Length=431, Percent_Identity=23.2018561484919, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR018422 - InterPro: IPR018417 - InterPro: IPR004705 - InterPro: IPR002014 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 59790; Mature: 59790
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENITVIIMLLFGVAFLSLISKRYNFPIPIVLVMCGVIISVIPGLPVIALSPEIVFIIFL CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEHH PPLLYHAAWHTSWSDFKQTIRPITLAAVGLVFFTTGLVAVVAHWLIDDISWPLAFLLGAI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VSPPDAVSATAITKGLGLHPRLIAILEGESLVNDASGLVAYKYALTAITAGNFVLWQAGL CCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHH NFVLMSVLGIAVGLAVGFIMYYIHKKFVCDDIIEVTLTLLTPFASYLIAEHFHGSGVLAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VATGLFLAARTGAIFSHESRIMTNTIWDVLNNILNGLIFILIGLQLRQIMDGISNYSGNA HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LFIWGSVISIVVIVVRFLWVIPATVIPRMLSKRIREKEEFDYRNMIVFGWSGMRGVVSMA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH AALALPLMLNKTEEFPLRNLIIYLVFCVILSTLVIQGLTLPWLIKKLKIERYSILAEEYN HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC VRNVIVSETISHIEDNFSLLDDELLHNIKSKYEVKFNRLQKTELPANFFGNGKVLDGQIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHH NEFTRVQIDLLNVERSKLESMHKKGSVNEEIFRKIEKELDLEETRLWMEMYEE HHHHHHHHEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MENITVIIMLLFGVAFLSLISKRYNFPIPIVLVMCGVIISVIPGLPVIALSPEIVFIIFL CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEHH PPLLYHAAWHTSWSDFKQTIRPITLAAVGLVFFTTGLVAVVAHWLIDDISWPLAFLLGAI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VSPPDAVSATAITKGLGLHPRLIAILEGESLVNDASGLVAYKYALTAITAGNFVLWQAGL CCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHH NFVLMSVLGIAVGLAVGFIMYYIHKKFVCDDIIEVTLTLLTPFASYLIAEHFHGSGVLAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VATGLFLAARTGAIFSHESRIMTNTIWDVLNNILNGLIFILIGLQLRQIMDGISNYSGNA HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LFIWGSVISIVVIVVRFLWVIPATVIPRMLSKRIREKEEFDYRNMIVFGWSGMRGVVSMA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH AALALPLMLNKTEEFPLRNLIIYLVFCVILSTLVIQGLTLPWLIKKLKIERYSILAEEYN HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC VRNVIVSETISHIEDNFSLLDDELLHNIKSKYEVKFNRLQKTELPANFFGNGKVLDGQIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHH NEFTRVQIDLLNVERSKLESMHKKGSVNEEIFRKIEKELDLEETRLWMEMYEE HHHHHHHHEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA