| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is mgtC [H]
Identifier: 146301654
GI number: 146301654
Start: 4662631
End: 4663053
Strand: Reverse
Name: mgtC [H]
Synonym: Fjoh_3916
Alternate gene names: 146301654
Gene position: 4663053-4662631 (Counterclockwise)
Preceding gene: 146301655
Following gene: 146301644
Centisome position: 76.48
GC content: 38.53
Gene sequence:
>423_bases ATGACTACAACCGAATTTTTCACACGACTGGTAATTGCCTTATTTGCCGGATTGATTATAGGATTTGAAAGACAATGGCA TCATAAAGAAACGGGTTTAAAAACCAATATGCTTGTAGCAACCGGAGCCGCTGCTTTTGTTTTATTGTCTATAAAAGTGG CAGCAAATGCCCCAAATATCGATGTTACCCGTATCACGGCTCAGGTTGTTATGGGAGTTGGTTTTTTGGGTGCCGGTGTT ATATTTAGAGAAGGTTCAAATGTACACGGATTAAATTCGGCGGCAACAATATGGTGCAGTGCGGCAATTGGCTGTATTTC TGCTTCTGGTTATTTTATTGAAGCTTTAATTTGTACATTTTTGGTAATTATTGTCAATACAGTTTTAGAACCTGTAGAAA AGTGGATGAGGAATAGGAAGTGA
Upstream 100 bases:
>100_bases AAATTAAAGGCTCTTTTGATAACAATTTTTTTAACATTATAAGAATATCCTAAACCATAAAAAAAACAGGCTATTTTTAA TCTTAGAAAACAGAATAATT
Downstream 100 bases:
>100_bases ATTGACAATTGATAATTCACAATTATTAATTGTCAATTTTTAATTATTAATTTTTGTTTTCAGCCTTCTGTGTAGGGATC ATTCCATAATGAATTTGGTT
Product: MgtC/SapB transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTTTEFFTRLVIALFAGLIIGFERQWHHKETGLKTNMLVATGAAAFVLLSIKVAANAPNIDVTRITAQVVMGVGFLGAGV IFREGSNVHGLNSAATIWCSAAIGCISASGYFIEALICTFLVIIVNTVLEPVEKWMRNRK
Sequences:
>Translated_140_residues MTTTEFFTRLVIALFAGLIIGFERQWHHKETGLKTNMLVATGAAAFVLLSIKVAANAPNIDVTRITAQVVMGVGFLGAGV IFREGSNVHGLNSAATIWCSAAIGCISASGYFIEALICTFLVIIVNTVLEPVEKWMRNRK >Mature_139_residues TTTEFFTRLVIALFAGLIIGFERQWHHKETGLKTNMLVATGAAAFVLLSIKVAANAPNIDVTRITAQVVMGVGFLGAGVI FREGSNVHGLNSAATIWCSAAIGCISASGYFIEALICTFLVIIVNTVLEPVEKWMRNRK
Specific function: Virulence factor required for growth in low Mg(2+) medium and for intramacrophage survival. May be involved in regulating membrane potential by activating Na(+)/K(+)-ATPase [H]
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family [H]
Homologues:
Organism=Escherichia coli, GI1789924, Length=143, Percent_Identity=36.3636363636364, Blast_Score=88, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003416 [H]
Pfam domain/function: PF02308 MgtC [H]
EC number: NA
Molecular weight: Translated: 15115; Mature: 14984
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTEFFTRLVIALFAGLIIGFERQWHHKETGLKTNMLVATGAAAFVLLSIKVAANAPNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC DVTRITAQVVMGVGFLGAGVIFREGSNVHGLNSAATIWCSAAIGCISASGYFIEALICTF HHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH LVIIVNTVLEPVEKWMRNRK HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTTEFFTRLVIALFAGLIIGFERQWHHKETGLKTNMLVATGAAAFVLLSIKVAANAPNI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC DVTRITAQVVMGVGFLGAGVIFREGSNVHGLNSAATIWCSAAIGCISASGYFIEALICTF HHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH LVIIVNTVLEPVEKWMRNRK HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA