| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301470
Identifier: 146301470
GI number: 146301470
Start: 4418184
End: 4418906
Strand: Reverse
Name: 146301470
Synonym: Fjoh_3728
Alternate gene names: NA
Gene position: 4418906-4418184 (Counterclockwise)
Preceding gene: 146301471
Following gene: 146301469
Centisome position: 72.48
GC content: 25.73
Gene sequence:
>723_bases ATGGACAAATTTCTTAAAAATATAGTGCTTATATTTATTTTAAGTTCTAATTTATTATATTCTCAAAAGCAAAAAACAAC AGATATGAAAGCTAAAAATTTATCTTATAAAGAAGGTAGCGCACTAATCGTTAAATATAATTTTAAAGAGATAGATTTCG ATCCAAATGATAAGGAGCATACATTTTATATAAATGAGGACAAGCAGTTTCTTATTTATTTTAAATTCATTGGCGATTTT ACTTTATATCCTTCAATGGAGTATTATATAAAAGTAATGGAAACATCTGACGACATTTATCCGATAATCAATTTTGATAA TTTTCAAGATAAGATTGAGGAAAGAATATCTTTTTTAAACAATCTTCTAGGCACAAATATATCTAGCCTTGATAAGCAAC GTGATGTAGAGGCTTTTGACAAAGCTATTAAGGATTTTGGTATTAAAAAGATTGATTTTAATTCTTTATTCATGAACTTC TTTTCATATTATTACGTGGTTCTACGCAATGAATTAAATTACCAGAATATAGAAATCCAATCTGAAGATGGTCGTTATGA TTTTTTTATATTTTCAAATGAAAAAAATAAGACGGAAATATTAAGTAGTTTTTACAGAATGATTATCGATCCAGATGATG TAATAAATTTTAATCTGCGGGTTGATATTGTTACCAATCCCTTTATTATCCCAATTGGTAAATCAAATTTGAAGACTAAT TAA
Upstream 100 bases:
>100_bases TCACTCCTCCAACAACATTATCATATTCCGCGCAACGAGCAACTGTGAAATTTCCAATTGGGCTTCCTCAGCTTCAAGGC GTAGAAATAAAATTTTAACT
Downstream 100 bases:
>100_bases ATAGAACTATTTTAAGGATGAACATTTTTGTTCATCCTTTTATAGTGTGCCCAGCATGGGCGATAACTCTAGGGTGTAAG TCCCGAGCACGCCTTTACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MDKFLKNIVLIFILSSNLLYSQKQKTTDMKAKNLSYKEGSALIVKYNFKEIDFDPNDKEHTFYINEDKQFLIYFKFIGDF TLYPSMEYYIKVMETSDDIYPIINFDNFQDKIEERISFLNNLLGTNISSLDKQRDVEAFDKAIKDFGIKKIDFNSLFMNF FSYYYVVLRNELNYQNIEIQSEDGRYDFFIFSNEKNKTEILSSFYRMIIDPDDVINFNLRVDIVTNPFIIPIGKSNLKTN
Sequences:
>Translated_240_residues MDKFLKNIVLIFILSSNLLYSQKQKTTDMKAKNLSYKEGSALIVKYNFKEIDFDPNDKEHTFYINEDKQFLIYFKFIGDF TLYPSMEYYIKVMETSDDIYPIINFDNFQDKIEERISFLNNLLGTNISSLDKQRDVEAFDKAIKDFGIKKIDFNSLFMNF FSYYYVVLRNELNYQNIEIQSEDGRYDFFIFSNEKNKTEILSSFYRMIIDPDDVINFNLRVDIVTNPFIIPIGKSNLKTN >Mature_240_residues MDKFLKNIVLIFILSSNLLYSQKQKTTDMKAKNLSYKEGSALIVKYNFKEIDFDPNDKEHTFYINEDKQFLIYFKFIGDF TLYPSMEYYIKVMETSDDIYPIINFDNFQDKIEERISFLNNLLGTNISSLDKQRDVEAFDKAIKDFGIKKIDFNSLFMNF FSYYYVVLRNELNYQNIEIQSEDGRYDFFIFSNEKNKTEILSSFYRMIIDPDDVINFNLRVDIVTNPFIIPIGKSNLKTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28592; Mature: 28592
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKFLKNIVLIFILSSNLLYSQKQKTTDMKAKNLSYKEGSALIVKYNFKEIDFDPNDKEH CHHHHHHHHEEEECCCCCEEHHHHHHCCCHHCCCCCCCCCEEEEEEECEEECCCCCCCCE TFYINEDKQFLIYFKFIGDFTLYPSMEYYIKVMETSDDIYPIINFDNFQDKIEERISFLN EEEECCCCEEEEEEEEECCEEECCCHHHEEEEEECCCCEEEEEECCCHHHHHHHHHHHHH NLLGTNISSLDKQRDVEAFDKAIKDFGIKKIDFNSLFMNFFSYYYVVLRNELNYQNIEIQ HHHCCCHHHHHHHCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHEEECCCCCEEEEEE SEDGRYDFFIFSNEKNKTEILSSFYRMIIDPDDVINFNLRVDIVTNPFIIPIGKSNLKTN CCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEEECCCCCCCC >Mature Secondary Structure MDKFLKNIVLIFILSSNLLYSQKQKTTDMKAKNLSYKEGSALIVKYNFKEIDFDPNDKEH CHHHHHHHHEEEECCCCCEEHHHHHHCCCHHCCCCCCCCCEEEEEEECEEECCCCCCCCE TFYINEDKQFLIYFKFIGDFTLYPSMEYYIKVMETSDDIYPIINFDNFQDKIEERISFLN EEEECCCCEEEEEEEEECCEEECCCHHHEEEEEECCCCEEEEEECCCHHHHHHHHHHHHH NLLGTNISSLDKQRDVEAFDKAIKDFGIKKIDFNSLFMNFFSYYYVVLRNELNYQNIEIQ HHHCCCHHHHHHHCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHEEECCCCCEEEEEE SEDGRYDFFIFSNEKNKTEILSSFYRMIIDPDDVINFNLRVDIVTNPFIIPIGKSNLKTN CCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA