| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301403
Identifier: 146301403
GI number: 146301403
Start: 4354709
End: 4355473
Strand: Reverse
Name: 146301403
Synonym: Fjoh_3661
Alternate gene names: NA
Gene position: 4355473-4354709 (Counterclockwise)
Preceding gene: 146301405
Following gene: 146301402
Centisome position: 71.44
GC content: 29.67
Gene sequence:
>765_bases ATGCCTCATGCTAAATCGCAACATACGAAAATGAGTAAAGTAAAGATTAAATTGATAATACTTGGACAACTCCCTGTTGA CCTTGACAAATTAAAATTATCAAATTGGAAATCAGAAGTATTTGAAATTGTTGGACAAATAGACAACTATTCTATTGTCA ATAATGCCGACGGTTTAAGTTGGGAATTTTCAGATGAAAATATTGAAGAACAACTTCCTGAAAATTATGACGGAGATTTT TTGATAGCAATGACTCATGTTCCCTTAGAGAACAATTATTATGCAAGACGTTTTGCCAATAATAGAATTTGTATGACATT TTATGAAATGGCAGACATACTAAATATTAATAATATTCCAATTGAAAATTTAGTTTATAGACTTCTGTATTCTTATACTT TAATCTATAAAAGACATGGAAATCGAATGCCGTCAAGAGACGAAATTACATCTTTTACACACGACGAAACGAGAGGTTGT TTATTTGATATGAACGGTATAAAAAGTGATGTGGTTTATTCAACAAATAATCCTATTATTTGCGACCAGTGCGTTCAAAA ATTGACTGCTGAAAAAGTGCCTTTAAATATAATATCTGAGATTAAAGAAGAACTTAAATCTGTAAAAAAAGGAATTTATT ACAGACTTGCTGACTTAATTAAAAAATATCCTGTTTGGGCAATTTTACTCTCTACAATTTCAGCATTTATAATTGGTACT TTAGGCTCATTAATCGCGACAATTATTTGGGAAAAACTAATCTAA
Upstream 100 bases:
>100_bases ATTATTATATATTTGATAATAAATTAATACTGATCCTTATCAGATATATCTGCCCAATTTTGGGTGATAGGTCTAATGTT GTCAGTAGTATATACTAGTT
Downstream 100 bases:
>100_bases AAAAAGCACGAAGGCAACAGCTAATTAAGCGTAAGTTGGGTATTGGTGTCTATTAAAAGTTGGTTTTGTATTTGCAAAAT TTGAGTTTAATTGAAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MPHAKSQHTKMSKVKIKLIILGQLPVDLDKLKLSNWKSEVFEIVGQIDNYSIVNNADGLSWEFSDENIEEQLPENYDGDF LIAMTHVPLENNYYARRFANNRICMTFYEMADILNINNIPIENLVYRLLYSYTLIYKRHGNRMPSRDEITSFTHDETRGC LFDMNGIKSDVVYSTNNPIICDQCVQKLTAEKVPLNIISEIKEELKSVKKGIYYRLADLIKKYPVWAILLSTISAFIIGT LGSLIATIIWEKLI
Sequences:
>Translated_254_residues MPHAKSQHTKMSKVKIKLIILGQLPVDLDKLKLSNWKSEVFEIVGQIDNYSIVNNADGLSWEFSDENIEEQLPENYDGDF LIAMTHVPLENNYYARRFANNRICMTFYEMADILNINNIPIENLVYRLLYSYTLIYKRHGNRMPSRDEITSFTHDETRGC LFDMNGIKSDVVYSTNNPIICDQCVQKLTAEKVPLNIISEIKEELKSVKKGIYYRLADLIKKYPVWAILLSTISAFIIGT LGSLIATIIWEKLI >Mature_253_residues PHAKSQHTKMSKVKIKLIILGQLPVDLDKLKLSNWKSEVFEIVGQIDNYSIVNNADGLSWEFSDENIEEQLPENYDGDFL IAMTHVPLENNYYARRFANNRICMTFYEMADILNINNIPIENLVYRLLYSYTLIYKRHGNRMPSRDEITSFTHDETRGCL FDMNGIKSDVVYSTNNPIICDQCVQKLTAEKVPLNIISEIKEELKSVKKGIYYRLADLIKKYPVWAILLSTISAFIIGTL GSLIATIIWEKLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29321; Mature: 29190
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHAKSQHTKMSKVKIKLIILGQLPVDLDKLKLSNWKSEVFEIVGQIDNYSIVNNADGLS CCCCCCHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCE WEFSDENIEEQLPENYDGDFLIAMTHVPLENNYYARRFANNRICMTFYEMADILNINNIP EEECCCCHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCEEEHHHHHHHHHCCCCCC IENLVYRLLYSYTLIYKRHGNRMPSRDEITSFTHDETRGCLFDMNGIKSDVVYSTNNPII HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCEEEECCCCEE CDQCVQKLTAEKVPLNIISEIKEELKSVKKGIYYRLADLIKKYPVWAILLSTISAFIIGT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LGSLIATIIWEKLI HHHHHHHHHHHHCC >Mature Secondary Structure PHAKSQHTKMSKVKIKLIILGQLPVDLDKLKLSNWKSEVFEIVGQIDNYSIVNNADGLS CCCCCHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCE WEFSDENIEEQLPENYDGDFLIAMTHVPLENNYYARRFANNRICMTFYEMADILNINNIP EEECCCCHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCEEEHHHHHHHHHCCCCCC IENLVYRLLYSYTLIYKRHGNRMPSRDEITSFTHDETRGCLFDMNGIKSDVVYSTNNPII HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCEEEECCCCEE CDQCVQKLTAEKVPLNIISEIKEELKSVKKGIYYRLADLIKKYPVWAILLSTISAFIIGT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LGSLIATIIWEKLI HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA