| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301391
Identifier: 146301391
GI number: 146301391
Start: 4341107
End: 4341766
Strand: Reverse
Name: 146301391
Synonym: Fjoh_3649
Alternate gene names: NA
Gene position: 4341766-4341107 (Counterclockwise)
Preceding gene: 146301392
Following gene: 146301389
Centisome position: 71.21
GC content: 30.45
Gene sequence:
>660_bases ATGATAGAAGAACTTCTTAAAAAAACCAATGATAAAAAGTTTTATAATGATTGCGATTTGAAGCTTGAATCTTATCGATT TGAAACTTCAACTAGTTCTTTAGAAATGATACTTTCAATTAATCAGAACAGTTATGATATACCTATTGAATATGAAGAGT GGAAATTATCATGTAGAAATACTGAAAAATTTGACGGTTTTTTTTGGAGCTTAACTTTGCCTTATGTTAAAATGAAAATT TTGCAGCATCATCCTCTATTGCTAATCTTTCATGAAAGCGAAATTGAATGTGAAATCACAGGTACGCCATTGAATGTCAA TGAATTTATTGGAGATGTCAGTAGTGCTCTGGAGAAAGAAACTGGAAATTGGATTACTGTCAATGAATACTTTTGGAATA ATGAGCAATTCTACCAAAATTATACGAAGAGAACAATCATAATACCTAAGTCTCTAGGGAATTCCATACTGCGAGTTTGT GAAAAACATAAAATGGGCTTTCAAATAAAAAGTGAACTTGTTGGTGAAAAAAAGGGATATGCAGATAAACCGAATGCTAA AATTCTAATTTTTGGCAATGAAGATGTTAGCCCCAATGATTTTAATCTTAGACAGCCATATATAATTGCGGAAGAATTTA TCGCAGAAAGAATTAAATAA
Upstream 100 bases:
>100_bases ACTAGAAGAATTCAAAACAGATATTAAAAGGGTCGAAAGAATTATTTATTATGCAGAATTTGATGCTTAAATAAAACGGG GAATTATTAAAAAACATGAC
Downstream 100 bases:
>100_bases TGCGACGGAATATTTAATTGTAATTTTATAAAACAGAAAAGAGACTCTAAAGTCTCTTTTTGTGTGAATTAATATGTCTT TTATAAAAGCTTATTTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MIEELLKKTNDKKFYNDCDLKLESYRFETSTSSLEMILSINQNSYDIPIEYEEWKLSCRNTEKFDGFFWSLTLPYVKMKI LQHHPLLLIFHESEIECEITGTPLNVNEFIGDVSSALEKETGNWITVNEYFWNNEQFYQNYTKRTIIIPKSLGNSILRVC EKHKMGFQIKSELVGEKKGYADKPNAKILIFGNEDVSPNDFNLRQPYIIAEEFIAERIK
Sequences:
>Translated_219_residues MIEELLKKTNDKKFYNDCDLKLESYRFETSTSSLEMILSINQNSYDIPIEYEEWKLSCRNTEKFDGFFWSLTLPYVKMKI LQHHPLLLIFHESEIECEITGTPLNVNEFIGDVSSALEKETGNWITVNEYFWNNEQFYQNYTKRTIIIPKSLGNSILRVC EKHKMGFQIKSELVGEKKGYADKPNAKILIFGNEDVSPNDFNLRQPYIIAEEFIAERIK >Mature_219_residues MIEELLKKTNDKKFYNDCDLKLESYRFETSTSSLEMILSINQNSYDIPIEYEEWKLSCRNTEKFDGFFWSLTLPYVKMKI LQHHPLLLIFHESEIECEITGTPLNVNEFIGDVSSALEKETGNWITVNEYFWNNEQFYQNYTKRTIIIPKSLGNSILRVC EKHKMGFQIKSELVGEKKGYADKPNAKILIFGNEDVSPNDFNLRQPYIIAEEFIAERIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25778; Mature: 25778
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEELLKKTNDKKFYNDCDLKLESYRFETSTSSLEMILSINQNSYDIPIEYEEWKLSCRN CHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCEECCEEEHHEEEEECC TEKFDGFFWSLTLPYVKMKILQHHPLLLIFHESEIECEITGTPLNVNEFIGDVSSALEKE CCCCCCEEEEEEHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHC TGNWITVNEYFWNNEQFYQNYTKRTIIIPKSLGNSILRVCEKHKMGFQIKSELVGEKKGY CCCEEEEEEEEECCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCC ADKPNAKILIFGNEDVSPNDFNLRQPYIIAEEFIAERIK CCCCCCEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHCC >Mature Secondary Structure MIEELLKKTNDKKFYNDCDLKLESYRFETSTSSLEMILSINQNSYDIPIEYEEWKLSCRN CHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCEECCEEEHHEEEEECC TEKFDGFFWSLTLPYVKMKILQHHPLLLIFHESEIECEITGTPLNVNEFIGDVSSALEKE CCCCCCEEEEEEHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHC TGNWITVNEYFWNNEQFYQNYTKRTIIIPKSLGNSILRVCEKHKMGFQIKSELVGEKKGY CCCEEEEEEEEECCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCC ADKPNAKILIFGNEDVSPNDFNLRQPYIIAEEFIAERIK CCCCCCEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA