| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301389
Identifier: 146301389
GI number: 146301389
Start: 4339569
End: 4340426
Strand: Reverse
Name: 146301389
Synonym: Fjoh_3647
Alternate gene names: NA
Gene position: 4340426-4339569 (Counterclockwise)
Preceding gene: 146301391
Following gene: 146301388
Centisome position: 71.19
GC content: 40.33
Gene sequence:
>858_bases ATGAAAGCAATTCAAAACACCGCATCCGATTTAATCTATCGAGTTATTTCACAGAACATCGATCCAATTGGCATTTACTG TTTTGCAGAGAAGAAAAGCAGTTATACTTTTAATGAGCCTTTCCAGAAGCCCGCTCAGAAAGAAAAGCATGTCCATCTTT ATCTGCTGGTTATAGCCGAAGAGTTCGAGGATAATATCGGCAATGACCTGACCGATAAGATAAAGAGCAGATCAAGAGGC CAGATAACGGTAACGATTCTCATGCACAGCCTGAGAAACATCGTCAAATTATACGGAGACCAGCAGTATTTCTTCTGGAA CATTTTTAAAAATGCGCAGAGGATTCATATAGATGCGTACAGATCGCCTATAATCTGGGCTAAGAATCCAGAAAAGAGAT ATGTGAAAAGCACTTCAGCATACGCAGGAGACAGAAGAAATGTCAGTGAATCGATCTGGGATCTTATCTATAATAACGAC CAGTATTTTTCCTATGAAGTCAGAATGTGTTCTCTCCACCAGATAGTTGAACAGACCTGCCTTTCCCTTATAAGGGTATT TCTGGGATATACCCCGAATCATTTCTCACTGGGCTACTTATTTGAGCTGTGCGAATACTTCACAAGCTTGACTTCTGAAT ATTTTCCCCGAAACAGCAGCGATGAAAAAAATATGTTCAAGCTTCTGAAAAAAAATCCAAACACGCTTCGATTCAGCAGA AGCAACAGTTTTGATTATCTGTATTATGGAATGATGGAAGGCCGATGCCGTGATTTCATGAAAGACGCAGAAGCTATGAT CCAGAAGGAACTGAAGAGGCTTGAGGGAATTCATCAGCAGGAAGCTTTATCAGCATAA
Upstream 100 bases:
>100_bases TAAAATTTGATGCCGTACGGTACAAGTAATTGCTTACTTGCCTGTGTGTTAAACAAAAATACAATTTTTCAGACAAGTAT TAACTAAAACGAGTAAAATT
Downstream 100 bases:
>100_bases AAACAGAAGTTATGGAAACCGATAAAATCAAAAAACTGGAAGGCATCAGGGCGTTAAGCGGAAAACTGCTTAATGCCCTG AAAAAAGCAGAGGATAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKAIQNTASDLIYRVISQNIDPIGIYCFAEKKSSYTFNEPFQKPAQKEKHVHLYLLVIAEEFEDNIGNDLTDKIKSRSRG QITVTILMHSLRNIVKLYGDQQYFFWNIFKNAQRIHIDAYRSPIIWAKNPEKRYVKSTSAYAGDRRNVSESIWDLIYNND QYFSYEVRMCSLHQIVEQTCLSLIRVFLGYTPNHFSLGYLFELCEYFTSLTSEYFPRNSSDEKNMFKLLKKNPNTLRFSR SNSFDYLYYGMMEGRCRDFMKDAEAMIQKELKRLEGIHQQEALSA
Sequences:
>Translated_285_residues MKAIQNTASDLIYRVISQNIDPIGIYCFAEKKSSYTFNEPFQKPAQKEKHVHLYLLVIAEEFEDNIGNDLTDKIKSRSRG QITVTILMHSLRNIVKLYGDQQYFFWNIFKNAQRIHIDAYRSPIIWAKNPEKRYVKSTSAYAGDRRNVSESIWDLIYNND QYFSYEVRMCSLHQIVEQTCLSLIRVFLGYTPNHFSLGYLFELCEYFTSLTSEYFPRNSSDEKNMFKLLKKNPNTLRFSR SNSFDYLYYGMMEGRCRDFMKDAEAMIQKELKRLEGIHQQEALSA >Mature_285_residues MKAIQNTASDLIYRVISQNIDPIGIYCFAEKKSSYTFNEPFQKPAQKEKHVHLYLLVIAEEFEDNIGNDLTDKIKSRSRG QITVTILMHSLRNIVKLYGDQQYFFWNIFKNAQRIHIDAYRSPIIWAKNPEKRYVKSTSAYAGDRRNVSESIWDLIYNND QYFSYEVRMCSLHQIVEQTCLSLIRVFLGYTPNHFSLGYLFELCEYFTSLTSEYFPRNSSDEKNMFKLLKKNPNTLRFSR SNSFDYLYYGMMEGRCRDFMKDAEAMIQKELKRLEGIHQQEALSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33690; Mature: 33690
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIQNTASDLIYRVISQNIDPIGIYCFAEKKSSYTFNEPFQKPAQKEKHVHLYLLVIAE CCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHCHHHHCCCEEEEEEEEEH EFEDNIGNDLTDKIKSRSRGQITVTILMHSLRNIVKLYGDQQYFFWNIFKNAQRIHIDAY HHHHHCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCEEEEEEC RSPIIWAKNPEKRYVKSTSAYAGDRRNVSESIWDLIYNNDQYFSYEVRMCSLHQIVEQTC CCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH LSLIRVFLGYTPNHFSLGYLFELCEYFTSLTSEYFPRNSSDEKNMFKLLKKNPNTLRFSR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEC SNSFDYLYYGMMEGRCRDFMKDAEAMIQKELKRLEGIHQQEALSA CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC >Mature Secondary Structure MKAIQNTASDLIYRVISQNIDPIGIYCFAEKKSSYTFNEPFQKPAQKEKHVHLYLLVIAE CCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHCHHHHCCCEEEEEEEEEH EFEDNIGNDLTDKIKSRSRGQITVTILMHSLRNIVKLYGDQQYFFWNIFKNAQRIHIDAY HHHHHCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCEEEEEEC RSPIIWAKNPEKRYVKSTSAYAGDRRNVSESIWDLIYNNDQYFSYEVRMCSLHQIVEQTC CCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH LSLIRVFLGYTPNHFSLGYLFELCEYFTSLTSEYFPRNSSDEKNMFKLLKKNPNTLRFSR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEC SNSFDYLYYGMMEGRCRDFMKDAEAMIQKELKRLEGIHQQEALSA CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA