| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301289
Identifier: 146301289
GI number: 146301289
Start: 4236080
End: 4236391
Strand: Reverse
Name: 146301289
Synonym: Fjoh_3547
Alternate gene names: NA
Gene position: 4236391-4236080 (Counterclockwise)
Preceding gene: 146301290
Following gene: 146301288
Centisome position: 69.48
GC content: 37.5
Gene sequence:
>312_bases ATGGCAGTAAGCGTATACCAAATCAATAAAGCAATCAATAAAAGTATTGAATTTAAAGGACTAAAAGCACAGTACATCTG GTATTTGGGCGGAGGAGCTGTGTCCTTAATGATAGTTTTTGCAGTGCTCTATATAATTGGAATTCCGTCACTGATTTGTG TTGGACTAATTGGGATATCAGGAGTCATTCTGGTTGTTAAAATCTATCGGATGAGTAATACTTACGGAGAGTATGGAATG ATGAAAGCGCTGGCTTCCAGACAGATCCCAAAATCTGTAAAAGTTCGAAGCAGGTCTGTTTTTTTAAAGTGA
Upstream 100 bases:
>100_bases CTGGGGATCCTGATACTGGTAAAGTAGCTGCAGCGTGGTTTGGAAGCTGTGTTTTTCTTGTCGTGGTAGCAACTGTCATT AAATCATTTTTTGGAGTATA
Downstream 100 bases:
>100_bases TAGTCTTAAAACGTTAACGTATTTATTGGATTATGAAAGTTCTAAATCTTTATGCGGGAATAGGAGGAAACAGAAAGAAC TGGACGGATGTTACGGTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: Conjugate Transposon Protein; Conjugal Transfer Protein TraF; Transmembrane Conjugate Transposon Protein
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MAVSVYQINKAINKSIEFKGLKAQYIWYLGGGAVSLMIVFAVLYIIGIPSLICVGLIGISGVILVVKIYRMSNTYGEYGM MKALASRQIPKSVKVRSRSVFLK
Sequences:
>Translated_103_residues MAVSVYQINKAINKSIEFKGLKAQYIWYLGGGAVSLMIVFAVLYIIGIPSLICVGLIGISGVILVVKIYRMSNTYGEYGM MKALASRQIPKSVKVRSRSVFLK >Mature_102_residues AVSVYQINKAINKSIEFKGLKAQYIWYLGGGAVSLMIVFAVLYIIGIPSLICVGLIGISGVILVVKIYRMSNTYGEYGMM KALASRQIPKSVKVRSRSVFLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11337; Mature: 11206
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSVYQINKAINKSIEFKGLKAQYIWYLGGGAVSLMIVFAVLYIIGIPSLICVGLIGIS CCEEHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GVILVVKIYRMSNTYGEYGMMKALASRQIPKSVKVRSRSVFLK HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCEECC >Mature Secondary Structure AVSVYQINKAINKSIEFKGLKAQYIWYLGGGAVSLMIVFAVLYIIGIPSLICVGLIGIS CEEHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GVILVVKIYRMSNTYGEYGMMKALASRQIPKSVKVRSRSVFLK HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA