| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301288
Identifier: 146301288
GI number: 146301288
Start: 4235397
End: 4236047
Strand: Reverse
Name: 146301288
Synonym: Fjoh_3546
Alternate gene names: NA
Gene position: 4236047-4235397 (Counterclockwise)
Preceding gene: 146301289
Following gene: 146301287
Centisome position: 69.48
GC content: 43.63
Gene sequence:
>651_bases ATGAAAGTTCTAAATCTTTATGCGGGAATAGGAGGAAACAGAAAGAACTGGACGGATGTTACGGTTACTGCTGTCGAACT CGATCCCCAGCTGGCTGCCGTTTATGCAGAGCATTTCCCTCAAGATACGGTCGTAGTTGGAGATGCACACCAATATCTTA TAGATCATCATAATGAATTTGATTTCATCTGGAGTTCGCCGCCGTGCCAGTCGCATTCCTCGTTTAGACAGAACATATGC GTAAGATTCCGCGGCACTCCTGCAGTATTTCCAGACATGAGACTGTATCAGGAAATTTTGTTTCTCAGGCATAACGCGGA ATGTTTATGGACTGTAGAAAATGTAAAACCTTACTATACACCACTTATCGAATCCAATGCCGCGCTGCAACGCCATTTGT TCTGGGCGAATTTTGAGATACCGGATACAGAGATACAGGCATCGGTAAAAATCCGTTATGCGCAGATACCGGATCTTGAA GAGGCTTTAGGATTTAGTATCAGGGCGTCCAGTATACCAAACAAAAGGCAGGTACTGCGAAACTGCGTTGATCCGCAGCT GGGACTGCATATTTTAAATTCAGCCAGAAGTGTCTGGCGGAAAAAAGTGAAAATGAGTAAAACAAGGAAAAATGGAAAAA GAATTGGATGA
Upstream 100 bases:
>100_bases AAGCGCTGGCTTCCAGACAGATCCCAAAATCTGTAAAAGTTCGAAGCAGGTCTGTTTTTTTAAAGTGATAGTCTTAAAAC GTTAACGTATTTATTGGATT
Downstream 100 bases:
>100_bases TGTATTACCGATTATGGACGTACAGCATGACTGTATTTTGTCAAAACAGGGTGATGTGACGATAGTATTTAAAGCAGATC TGCCAGAGATTTTTACGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKVLNLYAGIGGNRKNWTDVTVTAVELDPQLAAVYAEHFPQDTVVVGDAHQYLIDHHNEFDFIWSSPPCQSHSSFRQNIC VRFRGTPAVFPDMRLYQEILFLRHNAECLWTVENVKPYYTPLIESNAALQRHLFWANFEIPDTEIQASVKIRYAQIPDLE EALGFSIRASSIPNKRQVLRNCVDPQLGLHILNSARSVWRKKVKMSKTRKNGKRIG
Sequences:
>Translated_216_residues MKVLNLYAGIGGNRKNWTDVTVTAVELDPQLAAVYAEHFPQDTVVVGDAHQYLIDHHNEFDFIWSSPPCQSHSSFRQNIC VRFRGTPAVFPDMRLYQEILFLRHNAECLWTVENVKPYYTPLIESNAALQRHLFWANFEIPDTEIQASVKIRYAQIPDLE EALGFSIRASSIPNKRQVLRNCVDPQLGLHILNSARSVWRKKVKMSKTRKNGKRIG >Mature_216_residues MKVLNLYAGIGGNRKNWTDVTVTAVELDPQLAAVYAEHFPQDTVVVGDAHQYLIDHHNEFDFIWSSPPCQSHSSFRQNIC VRFRGTPAVFPDMRLYQEILFLRHNAECLWTVENVKPYYTPLIESNAALQRHLFWANFEIPDTEIQASVKIRYAQIPDLE EALGFSIRASSIPNKRQVLRNCVDPQLGLHILNSARSVWRKKVKMSKTRKNGKRIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24848; Mature: 24848
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLNLYAGIGGNRKNWTDVTVTAVELDPQLAAVYAEHFPQDTVVVGDAHQYLIDHHNEF CCEEEEEECCCCCCCCCCEEEEEEEEECCHHHHHHHHHCCCCEEEECCCHHHHHCCCCCE DFIWSSPPCQSHSSFRQNICVRFRGTPAVFPDMRLYQEILFLRHNAECLWTVENVKPYYT EEEECCCCCCCHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC PLIESNAALQRHLFWANFEIPDTEIQASVKIRYAQIPDLEEALGFSIRASSIPNKRQVLR HHHCCCHHHHHHEEEECCCCCCCCEEEEEEEEEECCCCHHHHHCCEEECCCCCCHHHHHH NCVDPQLGLHILNSARSVWRKKVKMSKTRKNGKRIG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKVLNLYAGIGGNRKNWTDVTVTAVELDPQLAAVYAEHFPQDTVVVGDAHQYLIDHHNEF CCEEEEEECCCCCCCCCCEEEEEEEEECCHHHHHHHHHCCCCEEEECCCHHHHHCCCCCE DFIWSSPPCQSHSSFRQNICVRFRGTPAVFPDMRLYQEILFLRHNAECLWTVENVKPYYT EEEECCCCCCCHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC PLIESNAALQRHLFWANFEIPDTEIQASVKIRYAQIPDLEEALGFSIRASSIPNKRQVLR HHHCCCHHHHHHEEEECCCCCCCCEEEEEEEEEECCCCHHHHHCCEEECCCCCCHHHHHH NCVDPQLGLHILNSARSVWRKKVKMSKTRKNGKRIG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA