| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is bglX [H]
Identifier: 146301263
GI number: 146301263
Start: 4194994
End: 4197294
Strand: Reverse
Name: bglX [H]
Synonym: Fjoh_3521
Alternate gene names: 146301263
Gene position: 4197294-4194994 (Counterclockwise)
Preceding gene: 146301264
Following gene: 146301262
Centisome position: 68.84
GC content: 36.16
Gene sequence:
>2301_bases ATGAAAAACAAATTAGTCTTACTTTTTTTAGGATGCGCTGTTTTGGGTTACGCTCAAAAAAAGCCGGCTAAAAATACAGT GAAAATTAAACCAAAGTCTGAATTTGTGGCGGAGTTAATGTCAAAAATGACTTTAGACGAGAAATTGGGTCAGTTAAACC TGCCAACATCTGGTGATATTACCACAGGGCAGGCAAACAGCTCAAATGTGGCAAAAAACATTGCTGAAGGAAAAGTGGGT GGTTTGTTTAACATTAAATCAGTTCAAAAAATTAAAGAAGTACAGAAAATTGCGGTTGAAAAAAGCCGTTTAAAAATTCC GCTGCTTTTTGGTATGGACGTAATTCACGGTTACGAAACAACATTCCCAATTCCGTTAGGATTATCTTGTACCTGGGATA TGGGCTTAATTGAAAGAAGTGCTCAGATTGCTGCAAAAGAAGCAAGTGCAGACGGTATCAACTGGACATTTTCTCCAATG GTTGATATTTCTCGTGATCCAAGATGGGGAAGAGTTTCTGAAGGTTCAGGGGAAGATCCATACTTAGGAAGCCAGATTGC AAAAGCAATGGTAAACGGATATCAGCAGCATGATCTTTCAAAAAATAACTCAATTTTAGCTTGTGTTAAGCACTTCGCAT TATACGGTGCTCCAGAAGGCGGACGTGATTACAACACGGTTGATATGAGCCACATCAGAATGTTTAATGACTATTTTCCT CCTTACAAAGCGGCAGTTGATGCTGGTGTAGGTTCGGTTATGGCTTCTTTCAACGAAGTTGACGGAATTCCAGCAACTGG AAACAAATGGTTAATGACAGATGTTTTAAGAAAACAATGGGGGTTCAAAGGATTTGTAGTAACTGATTTTACAGGAATTC CTGAAATGATCGAACACGGAATGGGGAATCTTCAAGATGTTTCTGCTTTAGCATTAAATGCTGGGGTTGAAATGGATATG GTTGGAGAAGGTTTCTTAGGAACTTTGAAAAAATCTTTAGACGAAGGAAGAGTAAAAATCGAAACAATCGATAATGCTGT AAAACTTATTTTAGAAGCAAAATACGATTTAGGATTATTCCAGGACCCATACAAATATTGTGATGAGAAAAGAGCAAAAA CTGAAATCTTCACAACTGACAGCAGAAAAGAAGCACGTGAAATTGCAGCACAATCTTTAGTTTTATTAAAAAACCAAAAC CAGCTTTTACCACTTAAAAAATCTGGAACTATTGGTTTAATCGGACCATTGGCAGATGCAAAAGAAAACATGCCAGGAAC TTGGAGTGTGGCTACAAAAATGGAAAATGCCGTTTCGTTATTGAGAGGTATTAAAGAAGTAGCCGGAGCTGGAACAAAAG TTTTATATGCAAAAGGAAGTAATTTAGATTACGATGAAACTTTTGAAACCAATGCGACAATGTTTGGTAAAACATTACAC CGTGATGCTCGTTCAAAAGAAGATTTATTAGCAGAAGCTTTAAAAGTAGCGGAGCAGTCAGATGTGATTGTGGCAGCTTT AGGAGAATCTGCAGAAATGAGCGGAGAATCTAGCAGCCGTACGAATTTAGAAATTCCACAAGCGCAAAAAGATTTATTAA ACGCTTTATTAAAAACAGGAAAACCAGTTGTTTTAGTTTTATTTGACGGACGTCCGTTAGTAATTACAGACGAAGAGAAA ACAGTTCCTGCAATTTTAAATGCTTGGTTCGCAGGTACAGAAGCTGGTTATGCTATTGCTGATGTATTATTCGGAGACGT AAATCCTTCAGGAAAATTGACTTCAACTTTTCCAAGAAGTGTTGGGCAGCTGCCAATTTACTACGCGCACAAAAATACAG GAAGACCACTTTCTAATACAGAAGGTAAATTCGAAAAATTCAGATCAAATTATATTGACGAAAGAAACGAGCCTTTATTC CCATTCGGATTTGGTTTAAGCTATACGACTTTTGATTATTCAAACCTGAAAATTTCTTCTGATAAAATGAATCCATCTGG AAAATTGAAAGTAACAGTTGATTTAACTAATACAGGAAATTTTGACGGAAAAGAAACAGTTCAATTATATATTAGAGATT TAGTTGGTTCAGTAACAAGACCAGTTAGAGAATTAAAAGGTTTCCAAAAAATAGCACTTAAAAAAGGTGAAAAACAAACC GTAAGTTTTGATATTACGGTTGAAGATTTAAAATTTTATAACTCTGATTTGCAATTTGCAGCAGAGCCTGGACAGTTTGA TATTTTCGTTGGAGGAAATTCAAATGCCGATAAGAAAGTTAGTTTTGAGTTAACTAAATAG
Upstream 100 bases:
>100_bases GCAAATCATGACAGCTGGACGAAAGTATATGATAATCAGGAAATCTATGACTGGATGTTCCAGCAGAAAAAAACAAATAC AAACAAATAAATAAAATAGA
Downstream 100 bases:
>100_bases TTGGTTTATTGATTAGTTAAAAGCCCTTCGTTTGGAGGGCTTTTTTTTAAACTGAAGAACCATTTTTGTAATTTTTTAAC TACGTTATTATGAATGCTCT
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 766; Mature: 766
Protein sequence:
>766_residues MKNKLVLLFLGCAVLGYAQKKPAKNTVKIKPKSEFVAELMSKMTLDEKLGQLNLPTSGDITTGQANSSNVAKNIAEGKVG GLFNIKSVQKIKEVQKIAVEKSRLKIPLLFGMDVIHGYETTFPIPLGLSCTWDMGLIERSAQIAAKEASADGINWTFSPM VDISRDPRWGRVSEGSGEDPYLGSQIAKAMVNGYQQHDLSKNNSILACVKHFALYGAPEGGRDYNTVDMSHIRMFNDYFP PYKAAVDAGVGSVMASFNEVDGIPATGNKWLMTDVLRKQWGFKGFVVTDFTGIPEMIEHGMGNLQDVSALALNAGVEMDM VGEGFLGTLKKSLDEGRVKIETIDNAVKLILEAKYDLGLFQDPYKYCDEKRAKTEIFTTDSRKEAREIAAQSLVLLKNQN QLLPLKKSGTIGLIGPLADAKENMPGTWSVATKMENAVSLLRGIKEVAGAGTKVLYAKGSNLDYDETFETNATMFGKTLH RDARSKEDLLAEALKVAEQSDVIVAALGESAEMSGESSSRTNLEIPQAQKDLLNALLKTGKPVVLVLFDGRPLVITDEEK TVPAILNAWFAGTEAGYAIADVLFGDVNPSGKLTSTFPRSVGQLPIYYAHKNTGRPLSNTEGKFEKFRSNYIDERNEPLF PFGFGLSYTTFDYSNLKISSDKMNPSGKLKVTVDLTNTGNFDGKETVQLYIRDLVGSVTRPVRELKGFQKIALKKGEKQT VSFDITVEDLKFYNSDLQFAAEPGQFDIFVGGNSNADKKVSFELTK
Sequences:
>Translated_766_residues MKNKLVLLFLGCAVLGYAQKKPAKNTVKIKPKSEFVAELMSKMTLDEKLGQLNLPTSGDITTGQANSSNVAKNIAEGKVG GLFNIKSVQKIKEVQKIAVEKSRLKIPLLFGMDVIHGYETTFPIPLGLSCTWDMGLIERSAQIAAKEASADGINWTFSPM VDISRDPRWGRVSEGSGEDPYLGSQIAKAMVNGYQQHDLSKNNSILACVKHFALYGAPEGGRDYNTVDMSHIRMFNDYFP PYKAAVDAGVGSVMASFNEVDGIPATGNKWLMTDVLRKQWGFKGFVVTDFTGIPEMIEHGMGNLQDVSALALNAGVEMDM VGEGFLGTLKKSLDEGRVKIETIDNAVKLILEAKYDLGLFQDPYKYCDEKRAKTEIFTTDSRKEAREIAAQSLVLLKNQN QLLPLKKSGTIGLIGPLADAKENMPGTWSVATKMENAVSLLRGIKEVAGAGTKVLYAKGSNLDYDETFETNATMFGKTLH RDARSKEDLLAEALKVAEQSDVIVAALGESAEMSGESSSRTNLEIPQAQKDLLNALLKTGKPVVLVLFDGRPLVITDEEK TVPAILNAWFAGTEAGYAIADVLFGDVNPSGKLTSTFPRSVGQLPIYYAHKNTGRPLSNTEGKFEKFRSNYIDERNEPLF PFGFGLSYTTFDYSNLKISSDKMNPSGKLKVTVDLTNTGNFDGKETVQLYIRDLVGSVTRPVRELKGFQKIALKKGEKQT VSFDITVEDLKFYNSDLQFAAEPGQFDIFVGGNSNADKKVSFELTK >Mature_766_residues MKNKLVLLFLGCAVLGYAQKKPAKNTVKIKPKSEFVAELMSKMTLDEKLGQLNLPTSGDITTGQANSSNVAKNIAEGKVG GLFNIKSVQKIKEVQKIAVEKSRLKIPLLFGMDVIHGYETTFPIPLGLSCTWDMGLIERSAQIAAKEASADGINWTFSPM VDISRDPRWGRVSEGSGEDPYLGSQIAKAMVNGYQQHDLSKNNSILACVKHFALYGAPEGGRDYNTVDMSHIRMFNDYFP PYKAAVDAGVGSVMASFNEVDGIPATGNKWLMTDVLRKQWGFKGFVVTDFTGIPEMIEHGMGNLQDVSALALNAGVEMDM VGEGFLGTLKKSLDEGRVKIETIDNAVKLILEAKYDLGLFQDPYKYCDEKRAKTEIFTTDSRKEAREIAAQSLVLLKNQN QLLPLKKSGTIGLIGPLADAKENMPGTWSVATKMENAVSLLRGIKEVAGAGTKVLYAKGSNLDYDETFETNATMFGKTLH RDARSKEDLLAEALKVAEQSDVIVAALGESAEMSGESSSRTNLEIPQAQKDLLNALLKTGKPVVLVLFDGRPLVITDEEK TVPAILNAWFAGTEAGYAIADVLFGDVNPSGKLTSTFPRSVGQLPIYYAHKNTGRPLSNTEGKFEKFRSNYIDERNEPLF PFGFGLSYTTFDYSNLKISSDKMNPSGKLKVTVDLTNTGNFDGKETVQLYIRDLVGSVTRPVRELKGFQKIALKKGEKQT VSFDITVEDLKFYNSDLQFAAEPGQFDIFVGGNSNADKKVSFELTK
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=738, Percent_Identity=49.0514905149051, Blast_Score=733, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 83911; Mature: 83911
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKLVLLFLGCAVLGYAQKKPAKNTVKIKPKSEFVAELMSKMTLDEKLGQLNLPTSGDI CCCCEEEHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCE TTGQANSSNVAKNIAEGKVGGLFNIKSVQKIKEVQKIAVEKSRLKIPLLFGMDVIHGYET ECCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHCCCCC TFPIPLGLSCTWDMGLIERSAQIAAKEASADGINWTFSPMVDISRDPRWGRVSEGSGEDP CCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCEEECCCEECCCCCCCCCCCCCCCCCC YLGSQIAKAMVNGYQQHDLSKNNSILACVKHFALYGAPEGGRDYNTVDMSHIRMFNDYFP CHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC PYKAAVDAGVGSVMASFNEVDGIPATGNKWLMTDVLRKQWGFKGFVVTDFTGIPEMIEHG CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHC MGNLQDVSALALNAGVEMDMVGEGFLGTLKKSLDEGRVKIETIDNAVKLILEAKYDLGLF CCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCC QDPYKYCDEKRAKTEIFTTDSRKEAREIAAQSLVLLKNQNQLLPLKKSGTIGLIGPLADA CCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHEEEEECCCCEEEEECCCCEEEEECCCHH KENMPGTWSVATKMENAVSLLRGIKEVAGAGTKVLYAKGSNLDYDETFETNATMFGKTLH HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH RDARSKEDLLAEALKVAEQSDVIVAALGESAEMSGESSSRTNLEIPQAQKDLLNALLKTG HHCCCHHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC KPVVLVLFDGRPLVITDEEKTVPAILNAWFAGTEAGYAIADVLFGDVNPSGKLTSTFPRS CCEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCHHEEHHHCCCCCCCCCCCCCCCHH VGQLPIYYAHKNTGRPLSNTEGKFEKFRSNYIDERNEPLFPFGFGLSYTTFDYSNLKISS HCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCEEEEC DKMNPSGKLKVTVDLTNTGNFDGKETVQLYIRDLVGSVTRPVRELKGFQKIALKKGEKQT CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VSFDITVEDLKFYNSDLQFAAEPGQFDIFVGGNSNADKKVSFELTK EEEEEEEHHHHHHCCCCEEEECCCCEEEEECCCCCCCCEEEEEECC >Mature Secondary Structure MKNKLVLLFLGCAVLGYAQKKPAKNTVKIKPKSEFVAELMSKMTLDEKLGQLNLPTSGDI CCCCEEEHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCE TTGQANSSNVAKNIAEGKVGGLFNIKSVQKIKEVQKIAVEKSRLKIPLLFGMDVIHGYET ECCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHCCCCC TFPIPLGLSCTWDMGLIERSAQIAAKEASADGINWTFSPMVDISRDPRWGRVSEGSGEDP CCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCEEECCCEECCCCCCCCCCCCCCCCCC YLGSQIAKAMVNGYQQHDLSKNNSILACVKHFALYGAPEGGRDYNTVDMSHIRMFNDYFP CHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC PYKAAVDAGVGSVMASFNEVDGIPATGNKWLMTDVLRKQWGFKGFVVTDFTGIPEMIEHG CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHC MGNLQDVSALALNAGVEMDMVGEGFLGTLKKSLDEGRVKIETIDNAVKLILEAKYDLGLF CCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCC QDPYKYCDEKRAKTEIFTTDSRKEAREIAAQSLVLLKNQNQLLPLKKSGTIGLIGPLADA CCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHEEEEECCCCEEEEECCCCEEEEECCCHH KENMPGTWSVATKMENAVSLLRGIKEVAGAGTKVLYAKGSNLDYDETFETNATMFGKTLH HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH RDARSKEDLLAEALKVAEQSDVIVAALGESAEMSGESSSRTNLEIPQAQKDLLNALLKTG HHCCCHHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC KPVVLVLFDGRPLVITDEEKTVPAILNAWFAGTEAGYAIADVLFGDVNPSGKLTSTFPRS CCEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCHHEEHHHCCCCCCCCCCCCCCCHH VGQLPIYYAHKNTGRPLSNTEGKFEKFRSNYIDERNEPLFPFGFGLSYTTFDYSNLKISS HCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCEEEEC DKMNPSGKLKVTVDLTNTGNFDGKETVQLYIRDLVGSVTRPVRELKGFQKIALKKGEKQT CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VSFDITVEDLKFYNSDLQFAAEPGQFDIFVGGNSNADKKVSFELTK EEEEEEEHHHHHHCCCCEEEECCCCEEEEECCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]