| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301262
Identifier: 146301262
GI number: 146301262
Start: 4194131
End: 4194904
Strand: Reverse
Name: 146301262
Synonym: Fjoh_3520
Alternate gene names: NA
Gene position: 4194904-4194131 (Counterclockwise)
Preceding gene: 146301263
Following gene: 146301261
Centisome position: 68.8
GC content: 32.82
Gene sequence:
>774_bases ATGAATGCTCTAAAAATATTTAGTGCAATATGTCTTATTGCTTTTTCATATTGCAATGCCCAAAAAAATGCGATAGTTGC TCATCGCGGTGCCTGGAAAAAAAATAATCTGCCCGAAAATTCAATTGCATCATTACGACATGCAATTGATTTAAAACTGC CGGGTTCAGAGTTTGATGTCTGGAGAACAGCTGATGATTCGCTTGTAATCAATCATGATGCGCATTACAACAAACTGCTT ATTGAAGAAACAAATTATGCAGATTTGATAAAATTTAAACTTTCAAACGGAGAAAAACTCCCAACCCTTCACGAATACAT TTCTGAAGGAATGCGAAATAATAAACATACACTTTTGGTCTGTGAAATTAAACCTTCAGAAATCAGTAAAGAAAGAGGAC AAAAAACGGGTGTAGCAGCAGTCGAAACCATTAAAAAATTAAAAGCCGATAAAAACACCTGCTACATCAGTTTTGATTAT GATATTCTAAAAAAAATCAGAGAAATTGATTCTAAAACTTCCCTGCAGTATTTGGAAGGAAATAAATCTCCAAAAGAAGT AAAAGCAGATAAAATTAACGGCGTTGATTATCATTATTCTGTTTTTCAAAAACATCCTGAATGGATACAAGAAGCAAAGG ATAACAAAATTATCCTAAATGCCTGGACTGTTAACGATGCTAAAGATATGGATTGGATTATTGAGCATAAATTCAATTAC ATTACAACCAACGAGCCAGAACTTTTAAGCGAAAGATTAAAAGCAAAAAAGTAA
Upstream 100 bases:
>100_bases TAACTAAATAGTTGGTTTATTGATTAGTTAAAAGCCCTTCGTTTGGAGGGCTTTTTTTTAAACTGAAGAACCATTTTTGT AATTTTTTAACTACGTTATT
Downstream 100 bases:
>100_bases GCTTTCAAACTTTACAAACAATCAACCATGAAAAATATATATAAACAACTTGCACTGCCTGTTTTATGGGTTTTGATATT TTTTAGTCAAAACCTTTCGG
Product: glycerophosphoryl diester phosphodiesterase
Products: NA
Alternate protein names: Glycerophosphodiester Phosphodiesterase; Glycerophosphodiesterase; Glycerophosphoryl Diester Phosphodiesterase Family Protein; Glycerophosphodiester Phosphodiesterase Family Protein
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MNALKIFSAICLIAFSYCNAQKNAIVAHRGAWKKNNLPENSIASLRHAIDLKLPGSEFDVWRTADDSLVINHDAHYNKLL IEETNYADLIKFKLSNGEKLPTLHEYISEGMRNNKHTLLVCEIKPSEISKERGQKTGVAAVETIKKLKADKNTCYISFDY DILKKIREIDSKTSLQYLEGNKSPKEVKADKINGVDYHYSVFQKHPEWIQEAKDNKIILNAWTVNDAKDMDWIIEHKFNY ITTNEPELLSERLKAKK
Sequences:
>Translated_257_residues MNALKIFSAICLIAFSYCNAQKNAIVAHRGAWKKNNLPENSIASLRHAIDLKLPGSEFDVWRTADDSLVINHDAHYNKLL IEETNYADLIKFKLSNGEKLPTLHEYISEGMRNNKHTLLVCEIKPSEISKERGQKTGVAAVETIKKLKADKNTCYISFDY DILKKIREIDSKTSLQYLEGNKSPKEVKADKINGVDYHYSVFQKHPEWIQEAKDNKIILNAWTVNDAKDMDWIIEHKFNY ITTNEPELLSERLKAKK >Mature_257_residues MNALKIFSAICLIAFSYCNAQKNAIVAHRGAWKKNNLPENSIASLRHAIDLKLPGSEFDVWRTADDSLVINHDAHYNKLL IEETNYADLIKFKLSNGEKLPTLHEYISEGMRNNKHTLLVCEIKPSEISKERGQKTGVAAVETIKKLKADKNTCYISFDY DILKKIREIDSKTSLQYLEGNKSPKEVKADKINGVDYHYSVFQKHPEWIQEAKDNKIILNAWTVNDAKDMDWIIEHKFNY ITTNEPELLSERLKAKK
Specific function: Unknown
COG id: COG0584
COG function: function code C; Glycerophosphoryl diester phosphodiesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29566; Mature: 29566
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALKIFSAICLIAFSYCNAQKNAIVAHRGAWKKNNLPENSIASLRHAIDLKLPGSEFDV CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHEEEECCCCCCCE WRTADDSLVINHDAHYNKLLIEETNYADLIKFKLSNGEKLPTLHEYISEGMRNNKHTLLV EEECCCCEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEE CEIKPSEISKERGQKTGVAAVETIKKLKADKNTCYISFDYDILKKIREIDSKTSLQYLEG EEECHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCHHHCC NKSPKEVKADKINGVDYHYSVFQKHPEWIQEAKDNKIILNAWTVNDAKDMDWIIEHKFNY CCCHHHHHHHCCCCCCHHHHHHHCCHHHHHHCCCCEEEEEEEECCCCCCCHHHHHCCCCE ITTNEPELLSERLKAKK EECCCHHHHHHHHHCCC >Mature Secondary Structure MNALKIFSAICLIAFSYCNAQKNAIVAHRGAWKKNNLPENSIASLRHAIDLKLPGSEFDV CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHEEEECCCCCCCE WRTADDSLVINHDAHYNKLLIEETNYADLIKFKLSNGEKLPTLHEYISEGMRNNKHTLLV EEECCCCEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEE CEIKPSEISKERGQKTGVAAVETIKKLKADKNTCYISFDYDILKKIREIDSKTSLQYLEG EEECHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCHHHCC NKSPKEVKADKINGVDYHYSVFQKHPEWIQEAKDNKIILNAWTVNDAKDMDWIIEHKFNY CCCHHHHHHHCCCCCCHHHHHHHCCHHHHHHCCCCEEEEEEEECCCCCCCHHHHHCCCCE ITTNEPELLSERLKAKK EECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA