Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301262

Identifier: 146301262

GI number: 146301262

Start: 4194131

End: 4194904

Strand: Reverse

Name: 146301262

Synonym: Fjoh_3520

Alternate gene names: NA

Gene position: 4194904-4194131 (Counterclockwise)

Preceding gene: 146301263

Following gene: 146301261

Centisome position: 68.8

GC content: 32.82

Gene sequence:

>774_bases
ATGAATGCTCTAAAAATATTTAGTGCAATATGTCTTATTGCTTTTTCATATTGCAATGCCCAAAAAAATGCGATAGTTGC
TCATCGCGGTGCCTGGAAAAAAAATAATCTGCCCGAAAATTCAATTGCATCATTACGACATGCAATTGATTTAAAACTGC
CGGGTTCAGAGTTTGATGTCTGGAGAACAGCTGATGATTCGCTTGTAATCAATCATGATGCGCATTACAACAAACTGCTT
ATTGAAGAAACAAATTATGCAGATTTGATAAAATTTAAACTTTCAAACGGAGAAAAACTCCCAACCCTTCACGAATACAT
TTCTGAAGGAATGCGAAATAATAAACATACACTTTTGGTCTGTGAAATTAAACCTTCAGAAATCAGTAAAGAAAGAGGAC
AAAAAACGGGTGTAGCAGCAGTCGAAACCATTAAAAAATTAAAAGCCGATAAAAACACCTGCTACATCAGTTTTGATTAT
GATATTCTAAAAAAAATCAGAGAAATTGATTCTAAAACTTCCCTGCAGTATTTGGAAGGAAATAAATCTCCAAAAGAAGT
AAAAGCAGATAAAATTAACGGCGTTGATTATCATTATTCTGTTTTTCAAAAACATCCTGAATGGATACAAGAAGCAAAGG
ATAACAAAATTATCCTAAATGCCTGGACTGTTAACGATGCTAAAGATATGGATTGGATTATTGAGCATAAATTCAATTAC
ATTACAACCAACGAGCCAGAACTTTTAAGCGAAAGATTAAAAGCAAAAAAGTAA

Upstream 100 bases:

>100_bases
TAACTAAATAGTTGGTTTATTGATTAGTTAAAAGCCCTTCGTTTGGAGGGCTTTTTTTTAAACTGAAGAACCATTTTTGT
AATTTTTTAACTACGTTATT

Downstream 100 bases:

>100_bases
GCTTTCAAACTTTACAAACAATCAACCATGAAAAATATATATAAACAACTTGCACTGCCTGTTTTATGGGTTTTGATATT
TTTTAGTCAAAACCTTTCGG

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester Phosphodiesterase; Glycerophosphodiesterase; Glycerophosphoryl Diester Phosphodiesterase Family Protein; Glycerophosphodiester Phosphodiesterase Family Protein

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNALKIFSAICLIAFSYCNAQKNAIVAHRGAWKKNNLPENSIASLRHAIDLKLPGSEFDVWRTADDSLVINHDAHYNKLL
IEETNYADLIKFKLSNGEKLPTLHEYISEGMRNNKHTLLVCEIKPSEISKERGQKTGVAAVETIKKLKADKNTCYISFDY
DILKKIREIDSKTSLQYLEGNKSPKEVKADKINGVDYHYSVFQKHPEWIQEAKDNKIILNAWTVNDAKDMDWIIEHKFNY
ITTNEPELLSERLKAKK

Sequences:

>Translated_257_residues
MNALKIFSAICLIAFSYCNAQKNAIVAHRGAWKKNNLPENSIASLRHAIDLKLPGSEFDVWRTADDSLVINHDAHYNKLL
IEETNYADLIKFKLSNGEKLPTLHEYISEGMRNNKHTLLVCEIKPSEISKERGQKTGVAAVETIKKLKADKNTCYISFDY
DILKKIREIDSKTSLQYLEGNKSPKEVKADKINGVDYHYSVFQKHPEWIQEAKDNKIILNAWTVNDAKDMDWIIEHKFNY
ITTNEPELLSERLKAKK
>Mature_257_residues
MNALKIFSAICLIAFSYCNAQKNAIVAHRGAWKKNNLPENSIASLRHAIDLKLPGSEFDVWRTADDSLVINHDAHYNKLL
IEETNYADLIKFKLSNGEKLPTLHEYISEGMRNNKHTLLVCEIKPSEISKERGQKTGVAAVETIKKLKADKNTCYISFDY
DILKKIREIDSKTSLQYLEGNKSPKEVKADKINGVDYHYSVFQKHPEWIQEAKDNKIILNAWTVNDAKDMDWIIEHKFNY
ITTNEPELLSERLKAKK

Specific function: Unknown

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29566; Mature: 29566

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALKIFSAICLIAFSYCNAQKNAIVAHRGAWKKNNLPENSIASLRHAIDLKLPGSEFDV
CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHEEEECCCCCCCE
WRTADDSLVINHDAHYNKLLIEETNYADLIKFKLSNGEKLPTLHEYISEGMRNNKHTLLV
EEECCCCEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEE
CEIKPSEISKERGQKTGVAAVETIKKLKADKNTCYISFDYDILKKIREIDSKTSLQYLEG
EEECHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCHHHCC
NKSPKEVKADKINGVDYHYSVFQKHPEWIQEAKDNKIILNAWTVNDAKDMDWIIEHKFNY
CCCHHHHHHHCCCCCCHHHHHHHCCHHHHHHCCCCEEEEEEEECCCCCCCHHHHHCCCCE
ITTNEPELLSERLKAKK
EECCCHHHHHHHHHCCC
>Mature Secondary Structure
MNALKIFSAICLIAFSYCNAQKNAIVAHRGAWKKNNLPENSIASLRHAIDLKLPGSEFDV
CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHEEEECCCCCCCE
WRTADDSLVINHDAHYNKLLIEETNYADLIKFKLSNGEKLPTLHEYISEGMRNNKHTLLV
EEECCCCEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEE
CEIKPSEISKERGQKTGVAAVETIKKLKADKNTCYISFDYDILKKIREIDSKTSLQYLEG
EEECHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCHHHCC
NKSPKEVKADKINGVDYHYSVFQKHPEWIQEAKDNKIILNAWTVNDAKDMDWIIEHKFNY
CCCHHHHHHHCCCCCCHHHHHHHCCHHHHHHCCCCEEEEEEEECCCCCCCHHHHHCCCCE
ITTNEPELLSERLKAKK
EECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA